Mach012757.1
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- -
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000012.1:8283891-8288571[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.00021 0.019 16.2 3.0 1 23 157 180 157 180 0.98 2 16 8.5e-05 0.0077 17.5 0.6 1 23 189 212 189 212 0.96 3 16 0.04 3.7 9.1 0.6 2 23 225 247 225 247 0.97 4 16 0.0031 0.28 12.6 2.2 1 23 256 279 256 279 0.96 5 16 4.2e-05 0.0038 18.5 1.3 1 23 291 314 291 314 0.97 6 16 5.2e-05 0.0047 18.2 0.8 2 23 346 368 345 368 0.97 7 16 0.00054 0.049 15.0 0.9 2 23 378 400 377 400 0.96 8 16 0.038 3.4 9.2 0.6 2 20 405 423 404 425 0.92 9 16 0.0011 0.1 14.0 3.7 2 21 430 449 429 452 0.94 10 16 0.04 3.7 9.1 2.1 3 23 462 483 461 483 0.95 11 16 0.0044 0.39 12.1 2.7 1 23 488 511 488 511 0.94 12 16 0.00019 0.018 16.4 0.6 2 23 522 544 521 544 0.95 13 16 0.00031 0.028 15.7 0.6 1 23 570 593 570 593 0.94 14 16 0.02 1.8 10.1 1.0 2 23 627 648 626 648 0.97 15 16 0.009 0.82 11.1 0.1 1 23 714 736 714 736 0.97 16 16 0.2 18 6.9 2.0 1 23 742 765 742 765 0.96
Sequence Information
- Coding Sequence
- atgtcaataaaagaagaaaaaccagacattaaagatattaaaattgaGGGGCTAGATGATGACAGAAAAGATCCTACATGGTACTTGCCTGAAGAAGCAATGACGTATGAAATTAAAGccaagaaaaaaaagaaaaagaaaaaacaagaaGATCCATTTAAGGATATAGAAGAGAAGGGCACCTTGCCCAATACAACAGTATATGTTCCAGTTACAGAAGTTAATCAAACACCAGTTTTAGATccagaaattaatataaaagttgaAAATATAGAAGTAGAGTTAGATTTTAATGATTTCGCAAACGATAATGGGTTAATGGTAGAGGGTCCCCATAGTGAAGACAGCCAAGAGCCTGCAGTAAAATTGGAAGACCAAAATCGTGAAGCGGTGCTACTAACTTTCGAAAGTATACTTAAAGATAAAAACGTTTTAGGATATTCCCCAGTAATGACTCCAGCGCCTAATTACGTGTGCAAAGTTTGCCATTTAGTCTTTCAAAGTCCAAAAACCCTTAGGATGCACCAGAAGAGAAAACACAAAGCTTTCCGGAAATCCTTCAAACACATATGTGACTACTGTGGAATGGCATatgaacaaaaaaatagtttggttGCACACATTAAAAGAAAACATGGACCTAATTCAGTACCTGATGATTTAGAAGAAAGAACTTGTGATGTGTGCGCGTTAGTTTTTAAAGGTATAACCAGATTACGGATGCATATGAGGAGAAAGCACGGATCTTTTGAAGagtcttttaaacatatttgtGTGGAGTGTGGGCTAACTTACGACAAACACAGAAGTTTGATCGTCCATATGCAAAGGAAGCATTCAAAACAGCCGAAACCAGTTATGGACACTTGGTACAATTGTCCGTTCTGCCCAAAAGTCTTCACTAAAAGGGAGACTTATGCGAGGCACGTTCAAAGAAAGCATCGAATTAATGATGAAGAACCCGACAAAAAAGATAAAAGCAAAGGCGAAAATCACGAATTGTTGCGCTGTCAAAATGTAGAGACAGGAGAAATTACTTGTAAGGAATGCCCTCTCGTTTTTTCGTCGTTAAACTTTTTGAAATTGCACATGAGAAGAAAGCATAACGCCTTAAGGGAAGATTTTAGATTAAAATGCATGATTTGCAATCTGTCATATGATAAAGTTGAGAGTTTAAAGCGGCATATCAGACGGAAACACGATAAAGGGTCGTATTGTGAAGTATGCGAGAAACAATTTGAAACTAGAGAAACGTATCTAGCTCATACGCATAAAAGATTGATCCAAGAGTGCCACATTTGTGGACTAGTTTTCGCCTCGCGCGGAGGTCTCTGCAAACATTTACGGTGTACGCACAAAATCGAATCGCCGAAGACTGTTTTTTGCGATCTATGCAACGAAAGCTTCCACGACAAAAGGCAACTGAAACCCCATTACATGAAAGTTCATTTGAAAGTGTCTTACACTTGTAGATTTTGTAAGAAGATATTCAGAGCGAAAGAAAGCTACAGACGCCACGTGCTTTTAAAGCATCCGAATTACAATCAAAACGAGAACCAGCAGAAATGCGATCAATGCCCGGAAACGTTTGTGGACGAGTTTGAGTTGTGTAAACATATCAATTTGGCACATCGCATGCCGAAAGGAGAAATAGGGGCGCCGACTTTTATAGAGATTAAGAAGGAGGAGATGGATATACCAGCTATGTTCCAATGCACGAAGTGTCCTGAAAACTACGAAACCTGGGAACAGTTGAAATTGCATTACGAACAGAACCATCAGAAAATATCAAATACTCAATGTCAGGTTTGCGGTGAAATGATACCTGAATTGGAAATACAGAAGCATATAAAATTAAACCATACAGACACGACAATCCAGTGTAGATATTGTGAATTCGAAACGGCCAACCGAACAAGTATGACACAGCATATGTTGCGGCACAAAAACGCTACTACTTTACACTGTGATTTCGCTGGCTGTAGATACAAAACTTATTACGAGGGTGCCATGGATAAACATAAGAGAAAACATGCTGATATCGGTGTGAAACTACAATGCACTCAGTGTCCATTCCAGacgatgaataaatatatattaaagtatcACGAGGAAGCTCATGCGACGGGTAAAAAGCGTTATGTCTGCGACAAATGCGACTATGCCACCATTCTACCAGCGAACTTAGTTCAACACAAATACAAACATTCCTCAGAGAAAAGGTTCAAATGTGAAGTATGCCCATTTGCTACAAAGTACAATACGTCGTTACGTTTTCATGTTAAGAAAAAACATTGTGATCTCCCATCATTTAAATAG
- Protein Sequence
- MSIKEEKPDIKDIKIEGLDDDRKDPTWYLPEEAMTYEIKAKKKKKKKKQEDPFKDIEEKGTLPNTTVYVPVTEVNQTPVLDPEINIKVENIEVELDFNDFANDNGLMVEGPHSEDSQEPAVKLEDQNREAVLLTFESILKDKNVLGYSPVMTPAPNYVCKVCHLVFQSPKTLRMHQKRKHKAFRKSFKHICDYCGMAYEQKNSLVAHIKRKHGPNSVPDDLEERTCDVCALVFKGITRLRMHMRRKHGSFEESFKHICVECGLTYDKHRSLIVHMQRKHSKQPKPVMDTWYNCPFCPKVFTKRETYARHVQRKHRINDEEPDKKDKSKGENHELLRCQNVETGEITCKECPLVFSSLNFLKLHMRRKHNALREDFRLKCMICNLSYDKVESLKRHIRRKHDKGSYCEVCEKQFETRETYLAHTHKRLIQECHICGLVFASRGGLCKHLRCTHKIESPKTVFCDLCNESFHDKRQLKPHYMKVHLKVSYTCRFCKKIFRAKESYRRHVLLKHPNYNQNENQQKCDQCPETFVDEFELCKHINLAHRMPKGEIGAPTFIEIKKEEMDIPAMFQCTKCPENYETWEQLKLHYEQNHQKISNTQCQVCGEMIPELEIQKHIKLNHTDTTIQCRYCEFETANRTSMTQHMLRHKNATTLHCDFAGCRYKTYYEGAMDKHKRKHADIGVKLQCTQCPFQTMNKYILKYHEEAHATGKKRYVCDKCDYATILPANLVQHKYKHSSEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPSFK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01021537;
- 90% Identity
- iTF_01017940;
- 80% Identity
- -