Mach004569.2
Basic Information
- Insect
- Morpho achilles
- Gene Symbol
- Rfx2
- Assembly
- GCA_947086495.1
- Location
- CAMTZB010000004.1:17470784-17492935[+]
Transcription Factor Domain
- TF Family
- RFX
- Domain
- RFX domain
- PFAM
- PF02257
- TF Group
- Basic Domians group
- Description
- RFX is a regulatory factor which binds to the X box of MHC class II genes and is essential for their expression. The DNA-binding domain of RFX is the central domain of the protein and binds ssDNA as either a monomer or homodimer [1]. It recognize X-boxes (DNA of the sequence 5'-GTNRCC(0-3N)RGYAAC-3', where N is any nucleotide, R is a purine and Y is a pyrimidine) using a highly conserved 76-residue DNA-binding domain (DBD) [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-37 1.6e-33 116.0 0.0 3 78 211 286 209 287 0.97 2 2 2.5 2.1e+04 -2.9 0.0 24 32 609 617 594 623 0.68
Sequence Information
- Coding Sequence
- ATGGTGAACATTGCAGATTTTGAGTGTGCGGGCGACGAAGTTTTGGTGGAGTCGTCGCCGCCCGCATCACCCGATATGGCGGCGCGGCTTGCGGCGCCCGCGCAGGGCGCGGTTGCCGGTGACGCGTCGCCGAACAGTGTTCGAGAGCTCATCGTCATACCGGAGTTACCCAACTCGATACACTTGCAGCATGCCATACAACAGGTATCCAGCACTGTGGTGGAGGTAAATGGTGACAGTTCGGGACACTCCAGCCCCACGACAGAAGCTCAGCACACTTACATCGTCACAATCGACAGCCCGTGGCGGGAACAGGTTGCGGAGCAAGTCAAGTCAGAGATCCAGAGCGACCAAGAAAGTGAGGGTGGCAATGGAGTGAACTATCACGTGCAATATGTCGAGCCCCAGGATATATACACGCAGTCAGGCCATCAGACGCATATGGAAACGCTGCGCACGTATCCGGTGTACGGCGTGGCGAACGTGGGCGCCGTGTCGGAGGGCGCCGCGGTGACGGCCGTGACCGCCGTGACCGCGGCGCCCGACGCCGGCGAGTGGGCCGCCGAGTTCGCGTTCAACCCGGCCGCGGAGCAGCCCACGTCGCCGGCGCCCGCTGCGCGCATGCCCCCCGCCACCGTGCAGTGGCTGCTCGACCACTACGAGACCGCGGAAGGCGTGTCCCTGCCGCGGTCCACGCTGTACGCGCACTACCTGCGGCACTGCTCTGCGCACCGCCTGGAGCCGGTGAACGCGGCGTCTTTCGGCAAGCTGATCCGATCAGTGTTCGTGGGGCTGCGCACACGTCGTCTGGGCACCAGGGGCAACTCCAAGTACCACTACTACGGCATCCGAGCCAAGCCCTCCGCGCAGAGGGacgccgcgcccgccgcgcaCAAGGCCGACATCGACGAGCCGCAGGAGGCACGTGAACGTGAGGTGGAGCCAAACCCGGTAGGCATGAGTGGTATCGCTCACCGACAGTACTTGGGCGTCGTGAGCGCGCCCGACCCGCCCGAGCTGATGGTGGACGAGCTGCCCGACGACATCCCGGTGGAGGCGCTGCAGCACTTCAGGGACCAGCACAGACAGCACGGCATAGAGTTCCTCGAGGCGGTGGCGGCGCTGGACACGGTCGGCGTGGAGCGCTGCCGGCGCGCCTTCTGGCGGCGCGTGGGCCGCGCGGGCGCCCGGCTCGCCGCCCGCCGCGACGTGTGCACGTGGCTGCGGCGCGCGGAGATGCGGCTGCACCAGCGCGCCGTGGACCTGCTGCTGCCGGACGTGCTGCGGCCCATACCGTCGCAGCTCACGCagGCGATCCGCAACTTCGCTAAGAGTCTGGAGGGCGTGCTGGCGGGCGCGGCGAGCGGCGCGCCGGCGCTGGCGGTGCGCGCGCAGGGCTCGGCGGCCGCGGCGCTGTCGGCCGCGCTGCGCCGGTACACGTCGCTCAACCACCTGGCGCAGGCTGCGCGCGCCGTGCTCAACAACCAGCACCAGATACAGCAGATGCTGTCCGATCTGAACCGGGTGGACTTCCGCGTGGTGCGCGAGCAGGCGGCGTGGGCCTGCGCCTGCGGCAGCGACAGCACCGCGCACAAACTGGAAGCCGATTTTAAGTCACGGTTGGGTCGCGGAGCTCCATTGGAAGCGTGGGCCTCGTGGCTTGAGGGCATGGTGCGCGATGCGCTGGCGCCGCACGAGGACCGCGCCGACTACACGCCGCGGGCTCGCCGGCTGCTGCTCGACTGGTCCTTTTACTCTTCACTGGTCATTCGGGAGCTGACACTCAGGTCGGCGGCGTCGTTCGGGTCGTTCCACCTGATCCGGCTGCTGTACGACGAGTACGTGTCGTTCCTCATCGAGCGGCGCGTGGCCGACCACCGCCAGGAGCCGCCCATCGCCGTCATGCAGCGCGCCATGGATGACGACGACGAGCTGCCGCCGTCGCCGGTGCGCGAGCTGGAGGAGGAGGAGGCCGAGCACGAGCAGGAGCAGGACTGGGAGTGGGAGGACGAGGACGAGGAGCCTCCAGACGCCAAGCGGGCCAAGAGCGACGAGTAG
- Protein Sequence
- MVNIADFECAGDEVLVESSPPASPDMAARLAAPAQGAVAGDASPNSVRELIVIPELPNSIHLQHAIQQVSSTVVEVNGDSSGHSSPTTEAQHTYIVTIDSPWREQVAEQVKSEIQSDQESEGGNGVNYHVQYVEPQDIYTQSGHQTHMETLRTYPVYGVANVGAVSEGAAVTAVTAVTAAPDAGEWAAEFAFNPAAEQPTSPAPAARMPPATVQWLLDHYETAEGVSLPRSTLYAHYLRHCSAHRLEPVNAASFGKLIRSVFVGLRTRRLGTRGNSKYHYYGIRAKPSAQRDAAPAAHKADIDEPQEAREREVEPNPVGMSGIAHRQYLGVVSAPDPPELMVDELPDDIPVEALQHFRDQHRQHGIEFLEAVAALDTVGVERCRRAFWRRVGRAGARLAARRDVCTWLRRAEMRLHQRAVDLLLPDVLRPIPSQLTQAIRNFAKSLEGVLAGAASGAPALAVRAQGSAAAALSAALRRYTSLNHLAQAARAVLNNQHQIQQMLSDLNRVDFRVVREQAAWACACGSDSTAHKLEADFKSRLGRGAPLEAWASWLEGMVRDALAPHEDRADYTPRARRLLLDWSFYSSLVIRELTLRSAASFGSFHLIRLLYDEYVSFLIERRVADHRQEPPIAVMQRAMDDDDELPPSPVRELEEEEAEHEQEQDWEWEDEDEEPPDAKRAKSDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00642081; iTF_00801540; iTF_01018315; iTF_00953261; iTF_00353814; iTF_01150966; iTF_00954142;
- 90% Identity
- -
- 80% Identity
- -