Mlae005749.1
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- lrrfip2
- Assembly
- GCA_947458855.1
- Location
- OX375842.1:22648042-22664792[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.18 6.9e+03 -2.9 0.5 46 76 70 100 53 111 0.52 2 3 8.3e-77 3.3e-72 244.5 18.3 1 295 126 401 126 405 0.89 3 3 1 3.9e+04 -6.1 9.9 1 29 402 430 402 447 0.76
Sequence Information
- Coding Sequence
- ATGGGTAATCGATCCAAAACAGTGACACCACAAACCACGGACAGTGAGGAGGGCGAAGTGTTCACCGACGGAGACTTCGAGGACTCCGACGATGATATCTGTAACCTTGACAAAACTGTCGTTCCCCTCAACGAAACCTTAAATTTAGTGATAAGGAAGTCGGAAGCAGATTTTAGAAATAGTGTGTGTGATGAACAGAATAATAATATAAAAGATTACAACATGGTTGACGGACACAGTAACGGTGTAAGCAATCACAATAATGGAATCACTTCGGACGCAAACTCCAGCGACAGTCCGACGGACATGCGCCGGAATTCTCATGAAGAATACAGTCCGTCCATAGTGGGCATAATCGGCAACCAACACAATCATGCAGAACAGCGGTTGGCAGCGCGTCGAGCGGCGCGGGCGGAGGCGCGGGAGATCCGCATGCGAGAGCTGGAGAGGCAGCAACGCGAGCAAGAAGACCATGCTGACAAAGCTTATGATATGTATTCGGAGACGGTGGGACGGCGGCCGCCCGCACGGATCTCGGCACTCAGTCCGGGGGGGCTTCACTCACCGCGCAGGAGCTCCGAGGACTCGGTCGACGATGGATTTTGTCTCAAGGATCTTAGGCATGAGCTCAAAGAGTATGAAGAGAAATTTCGTAGAGCGATGATTCTGAATGCACAACTGGATAACGACAAGGCGTCGCTCGCCTACCAGCTGGAGCTGCTCAAAGACAGGATCGACGAGCTTCAGCAAGAGCACGCGCAACTACAGCGCGAACACAAAGACAAATGTTCGTCGCACGAGCGTCTGAAGCGTGAGCACGCGTCGGTGTGTCGCGAGCTGTCGGACGCGCGGCTCGGGCTGCAGGCGCGGGAGGCGGCGGCGGCGGACGCGGGCCTGGCTTTCGCGGAGGCAGAGCCCACGCTGCTGCCGGGCTTCGGCTCCGTGCCTGCGCTCGCGCTCGTCTCCAAGCAAAACCACGACGCCTTGGCCGACGCCGGGGAAGGGACTCTCGATGTCCGGTTACAAAACCTGCTCAACACCAAGCAAAGTTTAGAATCGGAAGTACGCAAACTCAAACTGACCCTAAACGAGGAGAGAAGCGCACGACACAACGGTGTGGGTCACGACCAGGACTACGAGAATGAAGTGGAAACCCTCCGAAAGTGTGTATCGGATACCAAAGGGCGAGCCGCTCGCGCCGAGGCCGAGGCGGCTCTGCAGGCCGCGGCGGTGGCGAGGCTGGAGGCGCAAGTCGTCAGACTGCGGGCCGAGGGAGAGCGCCGCGACGAGACCGAGGGCACGCTCATGCAGGAGAGACGCAAGCTACAGCGAGAGGCACGGGAAGCTTTGAACAGGGTTGAGGAACTGGAAACCGAAAATAGTCATCTAACTAAGCGACTTGACAAACTGAAAAATGCTAAGTCAGCCTTACTTAAAGAACTTTAA
- Protein Sequence
- MGNRSKTVTPQTTDSEEGEVFTDGDFEDSDDDICNLDKTVVPLNETLNLVIRKSEADFRNSVCDEQNNNIKDYNMVDGHSNGVSNHNNGITSDANSSDSPTDMRRNSHEEYSPSIVGIIGNQHNHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYSETVGRRPPARISALSPGGLHSPRRSSEDSVDDGFCLKDLRHELKEYEEKFRRAMILNAQLDNDKASLAYQLELLKDRIDELQQEHAQLQREHKDKCSSHERLKREHASVCRELSDARLGLQAREAAAADAGLAFAEAEPTLLPGFGSVPALALVSKQNHDALADAGEGTLDVRLQNLLNTKQSLESEVRKLKLTLNEERSARHNGVGHDQDYENEVETLRKCVSDTKGRAARAEAEAALQAAAVARLEAQVVRLRAEGERRDETEGTLMQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -