Mlae011403.2
Basic Information
- Insect
- Monopis laevigella
- Gene Symbol
- -
- Assembly
- GCA_947458855.1
- Location
- OX375848.1:24226874-24229072[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5e-07 0.00017 22.4 0.0 9 40 20 53 17 57 0.89
Sequence Information
- Coding Sequence
- ATGGCGCGTACTAAAACTGCAGTAAGAAAGAAGGGCAACCATTCATCTGAAAATATGCTCAAAGCTATAAGACTTAATGGACAAGGAATGAGCATACGAAAAGCCGCAAAACAGTGCAACGTGTGTTATCCTACATTGTTTCGGTACATCAAAAAACATAAATATGTTAGTGATGCATCATTGAAAGATCAAAAAttaacgcctaactacgaagttaagaaaacttttacagatgaccaagaagcagcactcaaaacatatataaaagactgcgcattgaaattttatggattatctagtaaagatgttcgccgcgtcgcttatcaaatggcgacaatcaatgaaatcaaatgtcctgaaagttggaataaagaaaaaatggcagggaaagagtggcttcgatcttttaagtcgaggcatccagatttatcaatgaagaaacctgaggcctgtagtttggctcgtgccactgcatttaataaagtaacagtcaaaactttctatgataatctgaaaaatgttatggatcgtcattccacttttggcgatggtacaagagtgtataatctcgacgaaactgccacaacaacagtccaaaagccccagaaagtcttggcgccaaaaggaaaacagaatattggtaaagtaactagcggggaaaggggtacattggtgactacatgtgctattatatgtgcggcaggacaagcgttacctccggtgctcgtcttccctaggaaaaactacatagatgtaatgttgcatggtgctcctacaggatctctcggacttgcgactccaactgggtggatgaatgcggaactgtttgttcacgttatgcaacatttcattaaacatacctctgcaagccgtaacaaccctgcgcttttaatatttgataaccatgaatcacacctcagtatagaagctttaaatttagctaaagaatcaggggtgacagttctaacgttgcaccctcacacaactgcaaagatgcagccgcttgatgtgggcgtaaatggccccttcaaagtatattacaatagcgctgtcgattcatggttgatgaagaaccctggaaaaccaatgacaatttataatgtcgctgagtgcgtgggtcaggcatataagaaatcaatgacaccaacaaatatagcgtcagccttcaaaaaatgcggaattttcccgtatgatgcagacatttttaccgaaatcgacttcatgccagcgtcagttactgaCAGAGATCAACCAGCAGCGCCATATGATGCTCATGATGAACCACAATACAGAGATAATCTTGCTAGTCCCTCATCAGATTCAGATGTGACACGTGCTGATAGTCCATCTGTATTGGATGCTCAAGAAACTGAGCAGGCATGTGACACGCCGGATCCTAGTTTACCAACAAGAGCAACGACGCCGCCTGTCAACCAAATTTCCGTAAGTGAAGCTCAAGAACCAGGCACTAGCAAATTGAATAGAGAGATGACACCGCCTATCGTTAAAGTTCCTGTGAGTGTCAGAGCTAAGTTCAAAACTCCTGAAGAATTTATGCCTGCTTTGAAGGCTGGTCCGCGGACTATCAACCGTAAAGCAAGAAAGCTCGGTAAAAGCATGGTTGCAACGGACACGCCAGAGAAAGACCAGATAGCTGAAGAAAAGAAAAAATCTCAAGCAAGAAAATCAGCGGCAAAAGTAATGAAACGACCAATTTTATCTGATAAACAAGGAAAAAAGAAACCCaaaaagactaaaattgaaccagatcctgaaacaagtaccgatgaagatgaggaagtagtataccttagtgaaactgatttaagtggactagacgatgaagaagaatttgatgaggatgggccgcttttcattacagaaaatttcaaaaaacttgaccgtagaccccaaattaacgattacgtgctggttttattggacaacaagacactgaaggtatattatgttgcaaagataattgatgtagtaagtgctaatagatacgaggtctcgtttatgagattgaaagtgaaagacatgatgaaattttacatgccattagaaccggatatgtctgaaattcataaagaagagataaaaatgattcttcctccaccgcaaataaatggtacgaaaagccgaaactcattctatgttttcccagtccgcgtgtcaccgaatatgaagttacgttaa
- Protein Sequence
- MARTKTAVRKKGNHSSENMLKAIRLNGQGMSIRKAAKQCNVCYPTLFRYIKKHKYVSDASLKDQKLTPNYEVKKTFTDDQEAALKTYIKDCALKFYGLSSKDVRRVAYQMATINEIKCPESWNKEKMAGKEWLRSFKSRHPDLSMKKPEACSLARATAFNKVTVKTFYDNLKNVMDRHSTFGDGTRVYNLDETATTTVQKPQKVLAPKGKQNIGKVTSGERGTLVTTCAIICAAGQALPPVLVFPRKNYIDVMLHGAPTGSLGLATPTGWMNAELFVHVMQHFIKHTSASRNNPALLIFDNHESHLSIEALNLAKESGVTVLTLHPHTTAKMQPLDVGVNGPFKVYYNSAVDSWLMKNPGKPMTIYNVAECVGQAYKKSMTPTNIASAFKKCGIFPYDADIFTEIDFMPASVTDRDQPAAPYDAHDEPQYRDNLASPSSDSDVTRADSPSVLDAQETEQACDTPDPSLPTRATTPPVNQISVSEAQEPGTSKLNREMTPPIVKVPVSVRAKFKTPEEFMPALKAGPRTINRKARKLGKSMVATDTPEKDQIAEEKKKSQARKSAAKVMKRPILSDKQGKKKPKKTKIEPDPETSTDEDEEVVYLSETDLSGLDDEEEFDEDGPLFITENFKKLDRRPQINDYVLVLLDNKTLKVYYVAKIIDVVSANRYEVSFMRLKVKDMMKFYMPLEPDMSEIHKEEIKMILPPPQINGTKSRNSFYVFPVRVSPNMKLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00035595; iTF_00035594; iTF_01332555; iTF_01332554; iTF_01332556; iTF_01332557; iTF_01332558; iTF_00826899; iTF_00666474; iTF_00826898; iTF_00826900; iTF_00636344; iTF_00404852; iTF_00637572; iTF_00662171; iTF_00661226; iTF_00704955; iTF_00704954;
- 90% Identity
- -
- 80% Identity
- -