Basic Information

Gene Symbol
ZFX
Assembly
GCA_013373865.1
Location
CM023801.1:4271692-4286117[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 1.6 2.6e+02 3.2 0.1 3 23 16 36 15 36 0.94
2 15 3.1 5e+02 2.3 3.8 1 23 1060 1083 1060 1083 0.80
3 15 0.00023 0.037 15.2 1.9 2 23 1171 1193 1170 1193 0.96
4 15 0.0028 0.45 11.9 0.2 2 23 1206 1227 1206 1227 0.98
5 15 1.7e-05 0.0028 18.8 2.3 2 23 1230 1251 1229 1251 0.97
6 15 0.0021 0.35 12.2 0.3 1 23 1257 1279 1257 1279 0.96
7 15 4.2e-05 0.0068 17.6 4.3 2 23 1286 1307 1285 1308 0.95
8 15 0.11 17 6.9 3.7 5 23 1321 1339 1320 1339 0.97
9 15 2.1e-05 0.0035 18.5 1.5 3 23 1346 1367 1345 1367 0.97
10 15 0.0098 1.6 10.1 0.3 2 23 1383 1403 1382 1403 0.97
11 15 6.5e-05 0.01 17.0 0.7 1 20 1409 1428 1409 1431 0.92
12 15 8.1e-05 0.013 16.7 2.7 1 23 1439 1461 1439 1461 0.99
13 15 0.0023 0.36 12.1 3.2 1 23 1467 1489 1467 1489 0.97
14 15 4.1e-06 0.00066 20.8 3.9 1 23 1495 1517 1495 1517 0.99
15 15 0.0014 0.23 12.8 6.3 1 23 1523 1545 1523 1546 0.96

Sequence Information

Coding Sequence
ATGGAGCTCAACGGTGCGGGAACGCCTGTCGGCGGGGCCGTGGCCTGTCCCGTGTGTACTCTGTACCTGCGTGAGGGCATCAGTCTGCAGAAGCATCTGGACACTCATCCCAAGGAACAGGTTATAGATGCTCTCATCAAAGCCAGCACCTCCTCGTTGCAAacgcaacagcagcagcagcaggctCTACCAGCGTCGGTGGGAACGTCGCTACCATTATCGTTGCAGTCGCAGGCCACGCTTCAGACCACCCCTACCTCGATCCAGGCTGCGCCCCAGGCTACATCCTCCCAGGTCTCGCAGAACACGCACATCTCTGCACCCTCCCCATATCCCGTAGGACCCATCTTCGAGTGCCCACCCATAAGCACCATGATGCATCCACCACCACAGTTCACCTCGTTCAGTTATCAGCAATTTGTCAACAATGGGACCATGATGATACCGCAGTACGCCGCGATGGCGCCGCAGGCCAATCAGATGATGCAGATGCTGTACAATCCATACGGTATGTACCAACAGCAAATACCCACCGTCCAAATGATCTCACCGGTTGCAGCTATTCCTggggcgacggcgacgacgagggTCACTCGACCACCAGTGGTCACCATGGGAGCCACCGGAGGATGTGAGAGTAGCAACGTTAGGACCCTGACAGTCCCTGTAAATAGTCCAGAGCCGAAACAGATCCTACCGGAGATCCTGCCGGATCCCGCGGAGCCCGAGGCCAGCCAGGTTATCACGCCAGATTCCGTGAGCCTTTCGGCGTCGCCATCCGTGCTGTCGCCGAGCGAGACCGCCGCGTCCATTGTCAGAGCGAGAGAAGAAGGAGGTGATAATGGTGCGTTGCTGTCTATCGATCACCGAGGAGCAGCACAACAGCAGCAGAGCACGCGAAGCTGCTCCTCCACGCCTCCTGgtgacggcggcggtggcggaggCACGATGCAACAGCACCACGACGCGCACTACAATGCCATTCCCAGATCCATTACGATCGCCTGCGCCATAGACAGCGTTGACAACAAGGTGGAGAGCGTGTTGCCGGATGTAatggaggaagaggaagaaccGTCGAGCGACATAGTCTCGGCCGTAGACCACCTGCACTGCAAAACCGTCACGTACGAACAATCGGAGCAACAGTTTACACAGCAGGAGGAAACATATATGAGCATATCCGGGAAGATACACAACTGCGGGACGGCCGATGCAGTCGATTCCACGGGCTGCGTCGAATCGATGGAAATGATGACCGACGAAAGACCCGCGAgtcgcagcagcagcagcaacaacgtCAGCTTGCCACGGGATTTGATTGCGATGGACGCGACGTTGAAGGACTCGGTTCAACCCTCTGAGCTGAATTCTGTGGAGAAACTGGAGAATTTGATCACGATAATGGAGACGGAACTCAATAATGCCTCGCTTTCGCAGAAGGAGAGCGACGATCGGGAAAGATtgagagaggaggaagaggaggaagaggaaaaggagaaaagCGGTGGTGGCATCATGACGCTGGACAGAGAAGAGAGTGTGATTCACGACACGGTGGTCACGATTCCGGGCTCCCACGAAAAGGACCACATACTGCCCGACATACAGGAGCAGGAGAACGATTACGTGCCGGCCGACGAGGAACTGGGCGGAATGCTGGGGAAATCGTGCGGCGACGgctcgtcgtcatcgtcgtcgtcatacAAAGACATGGACTGCTCGAAGATCAACGAGGCGCTGGAGAGATTGGAGAGAACCTTTCACACGGATAATTACAAGTATAGTCTTTCAGCACCTGCGTCCCCGGTGGCGAGGAGAAGAAGCCGCGCAGCGGCGAGGGTCGCGCAGCAGCGTCGTTACAGCACGTGCTCGCGGTCGGAGCACGGGTCATGCGAGGATCTCCGCGGCGCCGGTGATTTCGCCACGGCTTCGTCGGCCATGcatgacgacgacgaggacgacgacgaggacgacgatgacgaggaGGACGAGGACGTGGACGAGGACGAGAAGATCGACGAGGAGGACAACTTCGACGAGGCGGACATGGAGATCGACGAGATTCCCAGTCCGCACACGCCCTTTGCGGActgtggcggcggcggcggcgtccgATCGCACACGCCATTGTCCACGATCAGCGGGATTTCCGTGCTCAGAGTCAGGAAGGATCTCAGCAAACCCTGCTCGCCAACTACGTCCATGCACTCGTTTCATCACGTGGACAGCGACAGTGTGGCAacccacgacgacgacgaggataGTAAGGACGGCATTGCGGAGAAGGATCCGATCGATTGTTCTCAGGTAGAGGAGGAGGatgaggaagaagaagaggaggaggaggaagaggaggagaaaatCAAGACTGATCATCAGCGTCATCATCAGGAGAACGTAGGTGGAGCACAGATGGCGGTGTGCGAGAGCGCGGTCGCCAAGATTCAGGAGCAAtctagcagcagcagcaactaCGCGGCGTACCATCAGTCAGTGATAACCGAACACATCAGTTCGTTCCCCGTAATACACTCGCAACCGTCGTCCGTCTTGATGCACGAGTCGTACTCCATCACGACGAGCACCAAGACGACACACCAGAACCTTCTGAATCTATCCGAGTCGATAAATCCCACGACCAGCAGCACGACCGAATCCAGGAACTTTCACTCCACGTCGGCCAAGTCGCTGATGCCGAAGCAATCGATGGAACTGCTCAACATAAACGAGGACGCTCATGCCGGGCCGATGAACGTCTTTGAGTTCGACGGACTGCAAATATTAGTTCCTAGTACGTTTATAAGTGACTCGTCCCAGAAGGCGGTGAGCGCGACCAGCCAGCAATCTATGGCGAGTAGCGAGGGTGCAATAGGTATCGACGAGGAAGTGAAGAGTATTAATATGCGTGCCGACGAGACTATGCCGCCCAGGGGCGAATTGTCGGAGCAGGAGAGCAATGGTTGCACGGAACAGTCCGCGTGGCAGTTGTACATGGGTCAAGAATCTTCGCGCATGTCCACTTCTTACGATCTGTTGGCACGAGAAAGCTGGGAGGAATCGGAAGGATCCGACAACGAGATCAGCGGGCCGTTGTTAGATAGCAGATCATTGGCCACGCATTTTACTTCGAGCTTGTTTTTGGATCGGGACCGAAAAACACCGACCAAACGAACATTCAAATGTTCCCACTGTAGCGAAGTGTTTGATTGTCCAAAGGAGCGTAGAGTTCACAGCACAACGGTGCACAAGGACGCGATGCCCAGTAGCAGTAGAGACCAGTTAGATCAGCCAGAGGTGAAGGACATCAAGTTGCTGGATAGTCGTATGAATATGTTCGATGACATATTTATGCCGAGTATACACATGCAACAGCACATGTACCATCATCAGCAGCCGCTTCTGCATCAGCTGCAGCCACCGTCGCAGCCTGGCTCGGATGGCTTGACGAAGGCTGAGACCGACCAGAAAATTGGCGAGAATTTGGTGATACCGTCGAACATCGAGGTGGTCTGCACGATATGCAGTCAGCGATTCAACAGCGAGAAATCTTTACAAGCGCATCACCGGCGCATGCATCTCGCCGAAGTGAACAAGCGCTTACGCGAAACCGCTAAGTGCCAGATATGCAACGAAGAGTTCCCGTCAGTGTTCCTGTTTAATGCACACCTAAAGATACATCCGTTAGAGTGCGGACAGTGCGGCAAGTATTTCTATCGCAAGCAAAACTTTAAACTTCACATGAAGCGTCACCTGGGCATCAAACCGTTCCCGTGTACTGTGTGCGACAAGGCGTTCCTCACTAAGCAGAAACTGGAGGAGCACACGAACGGCCACACTGGCAACGCACCCGTTCGGTGCAGCCTGTGCAATGAGACCTTCCGCCGATACTCGAATCTAACCCAGCACAAGAACAGGCATCATTtgaacattaagaaaaaactcAAAGATTACATATGCCACTGCGGCGAGGTATTCCACACGAAAAAGAAGCTTGCCTGGCACAAAGAGACGCATGACGAGAAACCCAAGGCTTGCACTTATTGTAACGAACGATTTATTCATATGGCCAGCCTAACACGTCACATGCGTCGCGCTCACAACCGTCGATTTGTTCCTGATGCTCAGCGCGAAAGTGAGAACGTCGAGTGCCCGATCTGCAAGTGTATCTATCTGCGATCGTCGCTTGCGGTGCACATGCGTGTGCATAACGGCGAGCGACCATACGAGTGCCAGGTCTGCTCCAAGGCGTTTAGCACCAAATGGAACCTGCAACTGCACAAGTGGACGCACGCGGCGCGCAGCACCAAGCCGTTCAAATGTAATCAGTGCAGCGCGGCGTTCTATCGTCACAGCGACTACACGGCGCACATGAATTCCCACCGAAATGTGCGGCCGTACACGTGCAATTACTGCGGTGCGCAGTTCATCCGCAAGTACAACTGCCTGCGGCACGTGAAAGAGCACGAAGAGAACAAAGCCTACACGTGCGACGTTTGCAACAAGACCTTCCACCGCTCGTACTATCTCAAGGAGCATCTGCGAGTGCACTCGGGTGCGCGACCGTACACGTGTCACATATGCGGAAAGTCCAGCGGCACCAAGTCCAATCACAACAAGCACGTGCGAATTCATCATGCGCGCGAGCCTGTAAATACCGAGAATTGA
Protein Sequence
MELNGAGTPVGGAVACPVCTLYLREGISLQKHLDTHPKEQVIDALIKASTSSLQTQQQQQQALPASVGTSLPLSLQSQATLQTTPTSIQAAPQATSSQVSQNTHISAPSPYPVGPIFECPPISTMMHPPPQFTSFSYQQFVNNGTMMIPQYAAMAPQANQMMQMLYNPYGMYQQQIPTVQMISPVAAIPGATATTRVTRPPVVTMGATGGCESSNVRTLTVPVNSPEPKQILPEILPDPAEPEASQVITPDSVSLSASPSVLSPSETAASIVRAREEGGDNGALLSIDHRGAAQQQQSTRSCSSTPPGDGGGGGGTMQQHHDAHYNAIPRSITIACAIDSVDNKVESVLPDVMEEEEEPSSDIVSAVDHLHCKTVTYEQSEQQFTQQEETYMSISGKIHNCGTADAVDSTGCVESMEMMTDERPASRSSSSNNVSLPRDLIAMDATLKDSVQPSELNSVEKLENLITIMETELNNASLSQKESDDRERLREEEEEEEEKEKSGGGIMTLDREESVIHDTVVTIPGSHEKDHILPDIQEQENDYVPADEELGGMLGKSCGDGSSSSSSSYKDMDCSKINEALERLERTFHTDNYKYSLSAPASPVARRRSRAAARVAQQRRYSTCSRSEHGSCEDLRGAGDFATASSAMHDDDEDDDEDDDDEEDEDVDEDEKIDEEDNFDEADMEIDEIPSPHTPFADCGGGGGVRSHTPLSTISGISVLRVRKDLSKPCSPTTSMHSFHHVDSDSVATHDDDEDSKDGIAEKDPIDCSQVEEEDEEEEEEEEEEEEKIKTDHQRHHQENVGGAQMAVCESAVAKIQEQSSSSSNYAAYHQSVITEHISSFPVIHSQPSSVLMHESYSITTSTKTTHQNLLNLSESINPTTSSTTESRNFHSTSAKSLMPKQSMELLNINEDAHAGPMNVFEFDGLQILVPSTFISDSSQKAVSATSQQSMASSEGAIGIDEEVKSINMRADETMPPRGELSEQESNGCTEQSAWQLYMGQESSRMSTSYDLLARESWEESEGSDNEISGPLLDSRSLATHFTSSLFLDRDRKTPTKRTFKCSHCSEVFDCPKERRVHSTTVHKDAMPSSSRDQLDQPEVKDIKLLDSRMNMFDDIFMPSIHMQQHMYHHQQPLLHQLQPPSQPGSDGLTKAETDQKIGENLVIPSNIEVVCTICSQRFNSEKSLQAHHRRMHLAEVNKRLRETAKCQICNEEFPSVFLFNAHLKIHPLECGQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLEEHTNGHTGNAPVRCSLCNETFRRYSNLTQHKNRHHLNIKKKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRESENVECPICKCIYLRSSLAVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYTCHICGKSSGTKSNHNKHVRIHHAREPVNTEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01523563;
90% Identity
-
80% Identity
-