Mpha009117.1
Basic Information
- Insect
- Monomorium pharaonis
- Gene Symbol
- ZAT10_2
- Assembly
- GCA_013373865.1
- Location
- CM023796.1:6664721-6668214[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 5.3 8.7e+02 1.5 2.6 3 23 411 431 410 431 0.80 2 14 0.00086 0.14 13.4 1.1 2 23 438 460 437 460 0.95 3 14 1.3e-05 0.0022 19.1 0.3 1 23 466 488 466 488 0.98 4 14 4.3e-06 0.0007 20.7 2.6 1 23 494 516 494 516 0.96 5 14 1.8e-05 0.003 18.7 2.9 1 23 525 547 525 547 0.97 6 14 2.4e-05 0.0039 18.3 1.5 1 23 553 575 553 575 0.98 7 14 1.1e-07 1.9e-05 25.6 1.6 1 23 580 602 580 602 0.98 8 14 0.0019 0.31 12.4 4.0 1 23 609 631 609 631 0.99 9 14 2e-05 0.0033 18.6 0.2 2 23 651 672 650 672 0.97 10 14 1.8e-05 0.0029 18.7 0.8 1 23 678 701 678 701 0.97 11 14 0.016 2.5 9.5 1.6 1 23 707 729 707 729 0.96 12 14 0.00046 0.075 14.3 3.4 1 23 735 757 735 757 0.98 13 14 1.1e-05 0.0018 19.4 3.0 1 23 763 785 763 785 0.98 14 14 1.6e-05 0.0025 18.9 1.2 1 21 791 811 791 812 0.94
Sequence Information
- Coding Sequence
- ATGAGAATCATTTGCGCTGCATTAAATTGCAAGTATTCTTCGGAAAGCGAGGACTCGTCAAATATcacttttatcaattttccaAATGATGACACAGCCAAGGTATGGGCAGAATGTTGTGGCAGATCAGATTTAGTTGCAAAATCGAGTGCAGAATTGCAttcgaattattatatttgttccCATCACATTGAAGATCGTTGTTATGTAAGCAAAGCTGGTTCTGTTGTTGTGGAAGAAGGTTCCATTCCTACTTTATTTGATACCGACTTGACTATCGATGGTGAGGACTCGATAAATATGTTCGATAAAGCGCAACAACTGCAAGAAGTAGGCGATGATGTTCCTTTAACATATTGCGATATGAATGTCGAGATGGACGAATATCACAATATCTCtgtaaaatttgtcaatttatgTCGAATCTGTGGTAAATCCACTCTGGATGGAATAGACATCTTTGCAGCCAAGGGTGTAGAGCTGAAATTAAAAGAGAGGATAAATTTGCATATGCCTATCTCGATTGACATAAATGACTCGTTGCCGCAGAAAGTATGTACTGATTGCTGTGACAAATTAGAAATTGCACACTCACTAGTTGTTTCATGTTTAAGAACCGATATacgtttaaaacaatttttaaatattgaaagaaagCCAGAATATGAAAATAAGTACAATGTATTGTTTGATGAATGTTCGTTAGAGATAGTTCAACAAATGTGTCTGGATGAAAATACGCATCCTAATCtgtttattgcaaataaaacgataaattCTGATTCAGTAACGAATTTAAGAGGATTGGGAAATAGTGAATGTTCtgaaatacaaaatagtaattttccGAGTATTGCCAAGAATGTTGTGCCATTAGAGCTTGATCCTTTGGTCCATAGTTGTAAAAAAGTTAACGGTAAAAGTAACATGATTATTGTGGAAGAGCTAGCAAAAGTTcaacaagataaaattaaaaatagaagccTTAGTATTTTATGTCTGCAGTGCCAAACTCTCTGTGAAAcgcaagaaatatttgaaaatcataaaatattttgtaataagatGCAAAATATCTCTGGACATGTAGATACGTTTAGAACAGTGAAAAACGGAAAGTTTGAGAACAACCAGATTAATGATACTAAAGTAGAAAATTCCCAGATGTGCAACGAAAGATTTGATGCCAAGCAAGTTatcaataatgttaaaagCTATGAATTAATGCTCTGTACTGTTTGCAACCAAACATTCAAATGTCAGCAGGACTACGATGATCACAAATATCTTCATTTTACTGAAGCGAATAAAAGATGTGGTCATTGTGAAAAAGCATATCAGAATAAAAAGGACTTGTTAGTTCATATTATGGAATCGCATGATGGCCGATTATCATTTAAGTGCTCTATATGCGATAAAACATACGAGAAATGGTCGAGTTTGGATATCCATGAGGCTACTCACCGAACAGATAAGCCCTATCTTTGCGATTTATGCGGAAAAAGCTTTAAGCATTCCAACAATTTGAGGGGACACAAAAGAATTCATTTAGACGAGTCTGTAAAAAAGAGACACGTGTGTGAGATCTGTGGCAACGCATTTAGGTCACGATTTCACCTGCGAGAGCATATGAATCAACACGACGATAACAGACCCTATTCTTGCGAACAATGCGGGAAAGCCTTTTACAAGAGGATTCAATTGCGACAACATAAATTGTCACATGGTTCTAATAAGCACACGTGTCCGATTTGCGGTACAACGTTCAATCGTAGAGGAAACATGAACGCGCATATGAAACGGCactgtaataataatggaGGATATACATGCAGTATTTGTGCCTACAAATGTAAATCTATGAGCGAATTGAAGATACACAGAAAGAAGCATACCGACGAAGAAATAGTGGAGagcattaaaaagaaatgtattgaCAAGGAGATATGGCGTTGTAACATTTGCGATAAAATATTCCCGAAGCGCGCTACTCTGTTAAATCACGAGCGTGTGCACGGAGACGATAAGTTTTACGAATGCGACGATTGTGGCAAGAAATTAGCGAGTAAAAGCTCGCTGATGTATCACAAAAAGTCGATGCATCTAAGGGAGAGGCCGCACATGTGTCATTATTGCGGAGACTCATTCGTTTCGAGAGAGGCGCGGTTGATTCACGAAAGGATACACACGGGCGAACGTCCGTACGTCTGCAAGGTGTGCAATATGCGGTACAGATGTTCCAGCAATCTCAGTCAGCACATGAAGATCCACACGGGTCTGAAGCCACACAAGTGTCACTTTTGCAACAAAGGTTTTGCGCGCAAGGGTGCGTTAACCGTGCACGAGAGAATCCACACGGGCGTTAAGCCTTATTCTTGCAAGACCTGCGGTAAGAGTTTTTCGCAGAAAAACGACATGTTGAAACACGCCAAACGTACAACAACAGATAAATGCAGTGCGGTCGGAGTAACAAGATCTTTAAACGGAAAGAAGAATATAATGAAACATTTCACGATGCACGAACAAAATACCTTAGTAATTTCGAACGTCAATTCATCACATCTTCAGATCTACGTCAATGCTAGTGCCTCTTCggaaattaagtaa
- Protein Sequence
- MRIICAALNCKYSSESEDSSNITFINFPNDDTAKVWAECCGRSDLVAKSSAELHSNYYICSHHIEDRCYVSKAGSVVVEEGSIPTLFDTDLTIDGEDSINMFDKAQQLQEVGDDVPLTYCDMNVEMDEYHNISVKFVNLCRICGKSTLDGIDIFAAKGVELKLKERINLHMPISIDINDSLPQKVCTDCCDKLEIAHSLVVSCLRTDIRLKQFLNIERKPEYENKYNVLFDECSLEIVQQMCLDENTHPNLFIANKTINSDSVTNLRGLGNSECSEIQNSNFPSIAKNVVPLELDPLVHSCKKVNGKSNMIIVEELAKVQQDKIKNRSLSILCLQCQTLCETQEIFENHKIFCNKMQNISGHVDTFRTVKNGKFENNQINDTKVENSQMCNERFDAKQVINNVKSYELMLCTVCNQTFKCQQDYDDHKYLHFTEANKRCGHCEKAYQNKKDLLVHIMESHDGRLSFKCSICDKTYEKWSSLDIHEATHRTDKPYLCDLCGKSFKHSNNLRGHKRIHLDESVKKRHVCEICGNAFRSRFHLREHMNQHDDNRPYSCEQCGKAFYKRIQLRQHKLSHGSNKHTCPICGTTFNRRGNMNAHMKRHCNNNGGYTCSICAYKCKSMSELKIHRKKHTDEEIVESIKKKCIDKEIWRCNICDKIFPKRATLLNHERVHGDDKFYECDDCGKKLASKSSLMYHKKSMHLRERPHMCHYCGDSFVSREARLIHERIHTGERPYVCKVCNMRYRCSSNLSQHMKIHTGLKPHKCHFCNKGFARKGALTVHERIHTGVKPYSCKTCGKSFSQKNDMLKHAKRTTTDKCSAVGVTRSLNGKKNIMKHFTMHEQNTLVISNVNSSHLQIYVNASASSEIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01408479;
- 90% Identity
- iTF_01015890;
- 80% Identity
- iTF_01015890;