Mpha003467.1
Basic Information
- Insect
- Monomorium pharaonis
- Gene Symbol
- -
- Assembly
- GCA_013373865.1
- Location
- JABXFI010000023.1:1279190-1289006[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 6e-06 0.00098 20.2 1.0 1 23 205 227 205 227 0.98 2 32 0.0087 1.4 10.3 3.7 1 23 250 273 250 273 0.96 3 32 0.00059 0.095 14.0 0.5 2 23 280 302 279 302 0.96 4 32 0.0028 0.45 11.8 0.1 1 21 322 342 322 343 0.95 5 32 0.001 0.17 13.2 0.2 2 23 441 462 440 462 0.95 6 32 0.0036 0.58 11.5 0.4 2 23 469 491 468 491 0.91 7 32 0.00018 0.029 15.6 0.2 1 23 564 587 564 587 0.96 8 32 0.051 8.3 7.9 2.9 1 23 593 616 593 616 0.95 9 32 0.12 19 6.7 1.5 1 23 629 651 629 651 0.97 10 32 3.3e-05 0.0054 17.9 0.9 3 23 696 717 695 717 0.96 11 32 4.4 7.2e+02 1.8 0.3 1 23 750 773 750 773 0.88 12 32 0.0059 0.96 10.8 1.0 2 23 780 803 779 803 0.94 13 32 0.87 1.4e+02 4.0 0.0 2 23 812 834 812 834 0.90 14 32 0.04 6.5 8.2 0.1 2 23 841 863 840 863 0.93 15 32 8.6e-05 0.014 16.6 3.2 1 23 871 893 871 893 0.97 16 32 0.018 2.9 9.3 0.9 2 23 936 959 935 959 0.94 17 32 0.0002 0.033 15.4 3.3 1 23 962 985 962 985 0.97 18 32 0.00015 0.024 15.8 0.2 2 23 992 1014 991 1014 0.96 19 32 0.00088 0.14 13.4 3.9 1 21 1041 1061 1041 1062 0.95 20 32 0.0026 0.42 11.9 1.8 2 23 1076 1097 1075 1098 0.93 21 32 0.35 56 5.2 1.1 1 23 1101 1124 1101 1124 0.94 22 32 0.0041 0.67 11.3 0.5 2 23 1131 1154 1130 1154 0.91 23 32 0.2 33 6.0 0.1 2 23 1162 1184 1162 1184 0.95 24 32 3.1 5.1e+02 2.2 0.0 2 23 1191 1213 1190 1213 0.88 25 32 0.22 35 5.9 2.7 2 23 1222 1244 1222 1244 0.96 26 32 0.7 1.1e+02 4.3 0.4 2 23 1250 1272 1249 1272 0.92 27 32 0.016 2.6 9.4 0.1 1 23 1334 1357 1334 1357 0.95 28 32 0.00016 0.027 15.7 1.1 1 21 1383 1403 1383 1404 0.95 29 32 0.31 50 5.4 1.9 2 23 1506 1528 1505 1528 0.94 30 32 0.89 1.4e+02 4.0 0.4 2 23 1535 1557 1534 1557 0.94 31 32 0.67 1.1e+02 4.3 2.5 1 23 1568 1590 1568 1590 0.97 32 32 0.0071 1.2 10.6 0.1 1 19 1594 1612 1594 1615 0.94
Sequence Information
- Coding Sequence
- ATGGACATATTCGGCCAGGAGGGTAAAAATCGTCAGCTCGTCGACAAAATTCAGTTGTTCCTGCCGTTCAAGGTGATGGAAAATGATTGTTTGCCAAAAGTCCTGTGTTATCGATGTATGTTCAACTTGGAAAATTTCTACGATTTCCGAATTTCGTGTATTAATGCTACTGCCTGGTTGGAAAGAAATAAACCGAAGGAAGGCGCGAGCAATGACGGTACAAATGATGGCGATGGGCACGCAGAGCTTCTTaaaggaaaggaaaatatGCCAGTACTTATCCCAGAAGCCCCCGTAGTCAATCCCAATGCGGCATTAGGTACACCGCCAAGATTAAATTCGGATGGTGAAGCGGATCCCGAAATCGAGGAGATTCTCGACACAAGTGAAGGTACGGATGAAGCTACAGTGATAGACGATTCGGAAGATCGGCGATCGGAATATGAGATGGCATATGAGATGGATATGGAGACGAATCCTAGCGATTTCTTAGAAATGACTCCAATGGTAACCGAAGAGAATGAAGAGGAGTGTGGTACAAACAACGCGAGCGCTGCCGCCACTACTCAGGATACTGCAGTCTTTCCACATGCATCGCAACAACACGAAGTCTACGTCTGCTCTCTATGCAATAAAGCATTTAGTTCCAAGGGTCATTTGTCACTGCACGCAAGGATTCACGTGGGCGAGGGTGATGTGATCGGCGAAAGAGTGATCACTGACGATCATACTTCGTATCAACGACCGTATCAATGTGATCTTTGTCATAAGTCATATTCTACTGCAAAACATCGTTGGGGACATGTTTCTACTACACATCGggGACATCCTGCAGTAACATGTGCGTACTGTTCTCGTATATACTCGACAAGATATAATCTTGATGAGCATATAAAATCGCGACACGCTGGTCTACCACCACCTCCAGAGTTATCTGTTTCTCATTCCCGCACGGAAACTCGATATCAGTGCCAAACGTGTCCGATGGTGTACACGGATTTGGCAGATTTCAATGCACATCGTCAGATATGCATCCAAGAACAACGTACAGATTTGTTGGGGCAGACCGAGGCACAGAACAATAAGATTTTTGCCGACACTTCTGACATTTCGAGCGTAGATTCGGACGATGAGAACAAAGACTTCAGGAACGCCGAGGCTAAATTGGCGAAAAATCCACAGTTAACTATATTGAAACAGGCGTTGACTAAGGGAGACAATTTAAAACGGAATTTCGACGATGATGGTTCGACATCCAACGGCAAgccgaaaaaaataattaagtcagAAGAGGACGAGACAAATCCTCAGAAGAGATGGTATTGCGAATCTTGTCCACAAAGTTTTACATCGGTAGATAATTTGAAGGAACACGAGATCAGACACGACGCCGAGAAGCCGTTTATCTGCATATTATGCAACAAAGATTTTGTTTTGAAATCTTCATTAATTAGACACATTACAACGTCACACGGCGTTGATCCTACCCCTATCATTGACAGTAACAAGTGTCTAAAAACAACAGTAATCTCTCAGAATTGGAACGATCAAATGGACGTCAGCGTTTATGAGCAAAGTGAGATAAAAGAACCACCAGAGCTCTTATCTTCACCTGAGGTaaagATAAATTTGGAGAATGATGACAAAGATTATAAGAACAACCATGAGAATATAGAAATTGAAACAGTATTTGTATGTGAGACTTGTAAGAGAGATTTCAATGACCGAGCGTCATTGTGGTTACATATACGAGCAATGCATAAAGAATACGCTGCATTCACTTGTGGAGTATGTCTAAAGATGTGCTTTAATAATACACAACTTCAAAATCATGTCTATATGTATCATGAAAAGTCTAAACTCTTAATATCAGAACAAAGAAGGTACAGTTGCACAATATGCGGTAGACAGCATGactcaagaaaaaaattaatcactcATGTCTCAATACATAATGTTGATCCTGCCTTTGATCCTGCAAGTTTTGTAAagttaaatagtaattattataatgaaaatttgaatGGTAACGAAGGAAATGAACAAGTATTAGATTTTGATGGAGAAGATGGCGAGAAGGTCGATTGTTACATTTGTTACAAATCTTTTCCGACTGAGGATCACCTAATACGGCATCAGAGAAATGCTCATAAGTCTGATCAAATAGTTTCATTAGGAGACGCCGCGGGTAGTGGAAATACTCTGAGCGTTAATGGTAATGGTAATAGAGCGCAAtaccatttattttttgtttgcgaGGTGTGCGGTAGTTCCCATTCAAGCAAATGGGAGCGCTGGTTGCATATCAATGACACACATAGCAACGAATCTTCTATTAAaTGCGAATTGGAAACTTGCGGAAAAATATTTGCGACAAAGTCGCTACGCAATGAACATCTCCAACATCATGCTATACAAGGACCCTCGCCAAACACCTGCGAGATATGCGGGAAATTATGGCCTACTCGTGTCGATTATTGGAAACACGTGATGGGCGTACACGCGGACACAGTACCTCTAATTTGTGGAGTTTGTCTCAAAGTATTTTCCGACGTTATACAATTAAGCACGCACGTGAAGGCGAAACATTGGCCGCTAACCAGTGGTGATTTTTGTTGTGATATTTGTGGTAGACCGTACTCCAATAAATCGAAGATGTCTCGGCACCGAAAGATCCACGGCTTGGAGGCGGCGGCCATGGACGCCGCATGTGACAATAGCAGTTTCAACGAGATTACCAATGAGTCGGTCACCAATGAGTCGGTGAAGCCTGAGCACAGCAATGGCGCTTCGGAAATAGATTTAAGTTGCGAGCAGTGCCCTGAGCTTAGCTTCACAACACTCGACAGTTTGTGTAATCATCGACGGATAGTGCACAACCTTTTCCCGTGTGACTTATGTAACAAATGCTATGGGAGAACGTCACATTTGTGGAAGCATGTGAACAGGGTGCACAAAGGTCATGTGGATGTGACTTGTCCTTACTGCTCGAAGACGAGCGCGTCGAGAGATCATCTAGCAGCACATATCGCCAAGATTCACAGGTTCATGCCTGCGATGGGTAAAGACACTCAGAACTGTGTCACCTCTAAATCTCTAAGCGTGGAGGATGGTGTTTTGCATTATTGCGAGAAGTGTAATAAGGGCTTTCATAAGCGCTATCTGCTCCGTCGCCACATGAAAGGCTGTCAAAACTATCGTAAGGATCCCGGTGCGTTGTTGACGCGTTGCCGAGCCTGCGAGAGGATATTCAAGGATCGTGCGAGTTTGCAGAAACATATTGAGAATCATCACAGTACGTATACCTGTCACTTGTGCAACGAGACGATCACCTCCAAGCTGGGCATTATGACGCACAATCGCGTCAATCATATGGATCACCCGGATCTGACGTGCGATTATCCGAGCTGTAAGAAACTCTTCCGCACCAAAGAGGATCTGGAAGCCCATCGGAAGGAGCACAAATATCACAGCAACCCGAACGTTTGCGATTATTGTGGTGACACTGTGGAAAACAAACTGAAACTAAAGATGCACATATTATCGTTGCATCGAAACGAGATCGGCGTGTCCTGTGGCGTTTGCCTCATTCCTATGAAGGATCCGAAAGATTTGAAGAAGCACGTCGAAGCGGAGCACAGTAGCGTTCTCTCCAATCCGAACACGTGCCAGGTATGCGGCAAACAATATGCGTCCAAATGGAAGGCCTTCGATCATACAAAGAAGTGTCATGGCAAAGTTTTTATCACGTGCAAACAGTGCTTAGCAGTTTTTACCGACGAGAATGACATACGCGATCACTATGAACATGTACATAACGTTCCGAAGGATCAATTGGCTATTTTTGAATACAGAATGGATATTGGTGCGAAGAGAGAGGGCTATGAAACTCCCGACATTATTGTAAAGGAAGAGCCGGATGACTTGGAATTCGACGAGGAAATGTGCGACGAGAGCTCGAACGACTCTCGCAAACGCAGAAGATCACCAAACGACACATACGACTGTGAGATGTGTCCTGAGATCTTTCTCAATTCGGACACTCTCGCCAAGCACTATCAGAACGTCCATAACACCGACCCCGTCCGTATGTTCAAGAAATTCAAAAAGGATGATAGCAAGCGCAAGATGAGAAACAGAAACAATTTTGAGTGCAAGAATTGCAAGAAGCAGTTTTCTACCAAGACCCTATTCTGGAATCACATTAATGTATGTGCGCGTCGAAACTCGATAGGTGGTAGATTCGACATGCCGAATAATGTCTCGACATCAATTCTGGAGACTCATCTGAAGAACAATAATCAGATTTCACGAGAGGACTCGGTGCCGCTAACGAACGAATCCAACCTAAACATTCCCGactttaatttattcgaaGACATTAATTTGCAGTTGTCGGCCCAAAAACCTGTGCCGAATCTTATGCCATTGTCACAGATGAAGGCGACGGGTAACGGCAAATGCTCGAGAAAAGACTCGCGTAAGGTCTACGACGAATCGACCAATACTGAATGCACATGCGAGGTTTGTGGCAAACAATGGCCTGccaaaaaacatttatggCAACATCTAATTCGATTCCATCGCGCCGAGGCCGCCGTTACGTGTGGCGTATGCTTGAAACTATGTAAATCTTATCAAGATCTGGCCGATCATTTGAAGGCCGAGCACGCCCCTGTTTTGTCGCCGGAGGGAAACAACTTTACCTGCAAGACGTGCGGCAGGTATCACAATGCGAGAAGTAAATTGTTGTTGCACATGAGCATTCACATTGGGAACTTCCGATGTCAAAAATGCCAGCAGAGTTTCGTGAGTGAAGAAAAACTCATCGAGCATGCAGCGAGTTGTAGTGGTAAATCGGAGTTTGAAGATCATGCGGTGGCGGACGAAGATAACGCAAAGAATGACAACGACGAGAAGGGCAGTTTAATCGCTGATGAGACGTCAGTTATCGAAGAAGCAGAGGAAGCAGAAGAGGCGGATTTTGAATCAGAAGGCGAAGGCAGTAGGGATATTCACAATGAAAACAATTCGGAGAATAGCGAAGAAGACAATTCGGATAATAGTGATGATTCAGATAGCGATAGCAATAGTAGTTCGAGCGAAGAAGAAAACGAGaacgaagaggaagaggaagaagaggaggaagaagatgaAAATGAAAACGAAAATGAGTCTGATACAAGGACCACTAGTAGAGCGAGCGGTGACAGTGTATCGTGTAACTCCGAGAGTGATGACGAATCAGATATGGATGAAACGGAAATGAATACAACGGAAAAGAAAACACTACAAATGAGCGATATTGGTAGATTCAGGATATGCAGCGAAGGCATTCAAAGGAACGTGCCGATAGAGAAAAATGTCAAGGAtcagaaaatcgattttaccATTACTGCAACTGCAGTTGTAGAACAAACTAAACAAAGTAATTTGAATGACCTCATGACTTCCGGTGCATCCGCGAATATAGACAAATTTGAGGCGTTTCGTCGCGAGGAATCTGCTAAAGATACGACGAGTGATGTAGACATGTCTAACGATAATGAAGATGATGGCGATAACGAAGAAGATGATGAAGAGAATGAAAatgaggaagaagaagaagacggTGAAGAAAGTGGTGAGGGTGAAGATgacgaagaagaggaggaaggtGAGGCTGAATCTGAATCTGAGAATGAGGATGAGGGTGAAGGTGAAGCCGTAGctgaggaagaaagagaggaagaaagagaggaagaagaggaggaagaggaagaagatgaagatgaagatgatgatgatgatgatgacgacgatgatgatgatgatgatgatggaCCACCCGTGTTAAGTCCAATAATGCCTTTGTTACCGGAAAACGAATCTGAGGAGCACAGCGGTACAACAGATCGCACGAGGCACAAGCTCAGTCCAATGGTTTCGCTGAGTATGGTTAAAGAAGATCTGGAGGAGTGCGAAATAACAGAGATACCAAATGACCCGGAAAATATGTCGAACGCAGCCAGTTTCTTCGTGGCTAATAACAACGATCTGCCCGTAACATGGGACGATAATTTGGACGATAATGGAATCGACAATGCCGAATGCAACTCGGACATTGGTGACAGAGATATGGAGAAAAATGAGGAATTCAGTAAGGAGTatgaaaaaatggaaatgaaCGAGGGCGACGACTTCGAGGAAGATTCTGCGGACGAGAACATAGTGGACAATAGTAGGGAGGATGATGGAGACACTCAAGTGCACGAGATGCATAATCTGGACGGAACTGTGCTAATGGTGACTAATGACGCGGAAGGTAATCAGATTTTAATAGAACAAAATATGTTAGATATCGATAACGAGGACTCGAATATCGAAACAGCGCAGTATATTTATCCAGAAAACACTTATGAAATTGCGGAAGATTACACGCAAAACGAAATCGGCGTTATACAGACGGATGAGGTGCAAGGTGATATGTCCTACGTTCAAGACACTTCGGAAAATGAAGATAATAGTATGGAAGGTGGTGTCGAGGAAACTAGCAGTGACGTGCAAAAACAGTAG
- Protein Sequence
- MDIFGQEGKNRQLVDKIQLFLPFKVMENDCLPKVLCYRCMFNLENFYDFRISCINATAWLERNKPKEGASNDGTNDGDGHAELLKGKENMPVLIPEAPVVNPNAALGTPPRLNSDGEADPEIEEILDTSEGTDEATVIDDSEDRRSEYEMAYEMDMETNPSDFLEMTPMVTEENEEECGTNNASAAATTQDTAVFPHASQQHEVYVCSLCNKAFSSKGHLSLHARIHVGEGDVIGERVITDDHTSYQRPYQCDLCHKSYSTAKHRWGHVSTTHRGHPAVTCAYCSRIYSTRYNLDEHIKSRHAGLPPPPELSVSHSRTETRYQCQTCPMVYTDLADFNAHRQICIQEQRTDLLGQTEAQNNKIFADTSDISSVDSDDENKDFRNAEAKLAKNPQLTILKQALTKGDNLKRNFDDDGSTSNGKPKKIIKSEEDETNPQKRWYCESCPQSFTSVDNLKEHEIRHDAEKPFICILCNKDFVLKSSLIRHITTSHGVDPTPIIDSNKCLKTTVISQNWNDQMDVSVYEQSEIKEPPELLSSPEVKINLENDDKDYKNNHENIEIETVFVCETCKRDFNDRASLWLHIRAMHKEYAAFTCGVCLKMCFNNTQLQNHVYMYHEKSKLLISEQRRYSCTICGRQHDSRKKLITHVSIHNVDPAFDPASFVKLNSNYYNENLNGNEGNEQVLDFDGEDGEKVDCYICYKSFPTEDHLIRHQRNAHKSDQIVSLGDAAGSGNTLSVNGNGNRAQYHLFFVCEVCGSSHSSKWERWLHINDTHSNESSIKCELETCGKIFATKSLRNEHLQHHAIQGPSPNTCEICGKLWPTRVDYWKHVMGVHADTVPLICGVCLKVFSDVIQLSTHVKAKHWPLTSGDFCCDICGRPYSNKSKMSRHRKIHGLEAAAMDAACDNSSFNEITNESVTNESVKPEHSNGASEIDLSCEQCPELSFTTLDSLCNHRRIVHNLFPCDLCNKCYGRTSHLWKHVNRVHKGHVDVTCPYCSKTSASRDHLAAHIAKIHRFMPAMGKDTQNCVTSKSLSVEDGVLHYCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSTYTCHLCNETITSKLGIMTHNRVNHMDHPDLTCDYPSCKKLFRTKEDLEAHRKEHKYHSNPNVCDYCGDTVENKLKLKMHILSLHRNEIGVSCGVCLIPMKDPKDLKKHVEAEHSSVLSNPNTCQVCGKQYASKWKAFDHTKKCHGKVFITCKQCLAVFTDENDIRDHYEHVHNVPKDQLAIFEYRMDIGAKREGYETPDIIVKEEPDDLEFDEEMCDESSNDSRKRRRSPNDTYDCEMCPEIFLNSDTLAKHYQNVHNTDPVRMFKKFKKDDSKRKMRNRNNFECKNCKKQFSTKTLFWNHINVCARRNSIGGRFDMPNNVSTSILETHLKNNNQISREDSVPLTNESNLNIPDFNLFEDINLQLSAQKPVPNLMPLSQMKATGNGKCSRKDSRKVYDESTNTECTCEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCKSYQDLADHLKAEHAPVLSPEGNNFTCKTCGRYHNARSKLLLHMSIHIGNFRCQKCQQSFVSEEKLIEHAASCSGKSEFEDHAVADEDNAKNDNDEKGSLIADETSVIEEAEEAEEADFESEGEGSRDIHNENNSENSEEDNSDNSDDSDSDSNSSSSEEENENEEEEEEEEEEDENENENESDTRTTSRASGDSVSCNSESDDESDMDETEMNTTEKKTLQMSDIGRFRICSEGIQRNVPIEKNVKDQKIDFTITATAVVEQTKQSNLNDLMTSGASANIDKFEAFRREESAKDTTSDVDMSNDNEDDGDNEEDDEENENEEEEEDGEESGEGEDDEEEEEGEAESESENEDEGEGEAVAEEEREEEREEEEEEEEEDEDEDDDDDDDDDDDDDDDGPPVLSPIMPLLPENESEEHSGTTDRTRHKLSPMVSLSMVKEDLEECEITEIPNDPENMSNAASFFVANNNDLPVTWDDNLDDNGIDNAECNSDIGDRDMEKNEEFSKEYEKMEMNEGDDFEEDSADENIVDNSREDDGDTQVHEMHNLDGTVLMVTNDAEGNQILIEQNMLDIDNEDSNIETAQYIYPENTYEIAEDYTQNEIGVIQTDEVQGDMSYVQDTSENEDNSMEGGVEETSSDVQKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_01354773;
- 80% Identity
- -