Basic Information

Insect: Monomorium pharaonis
Gene Symbol: bab2
Assembly: GCA_013373865.1
Location: JABXFI010000014.1:7312007-7369702[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.5e-12 1.8e-09 38.0 0.0 1 39 384 423 384 427 0.90

2 4 9.4e-13 1.1e-09 38.6 0.1 2 39 439 476 438 479 0.94

3 4 1.4e-18 1.6e-15 57.3 0.0 1 45 493 538 493 538 0.97

4 4 2.5e-18 2.9e-15 56.5 0.1 1 42 545 587 545 588 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.5e-12	1.8e-09	38.0	0.0	1	39	384	423	384	427	0.90
2	4	9.4e-13	1.1e-09	38.6	0.1	2	39	439	476	438	479	0.94
3	4	1.4e-18	1.6e-15	57.3	0.0	1	45	493	538	493	538	0.97
4	4	2.5e-18	2.9e-15	56.5	0.1	1	42	545	587	545	588	0.97

Sequence Information

Coding Sequence: ATGGTGAGCGGCGGCATGGCCGGGCAGCACTACTGCCTGCGCTGGAACAACTACCAGTCGAACATGACGTCGGTGTTCCACCAGCTCCTGCAGACCGAGGCCTTCGTCGACGTCACCCTGGCATGCAACGAGGCCTCATTGAAGGCGCACAAGGTGGTGCTGTCGGCCTGCAGCTCCTACTTCCAGAAGCTCCTGCTGTCGAACCCCTGCAAACACCCGACGATCATCATGCCGCAGGACGTCTGCTTCAACGACCTCAAGTTTATCATCGAGTTCGTCTACCGCGGCGAGATCGACGTTTCGCAAGCGGAGCTTCAGTCGCTCTTGAAGACGGCCGACCAGCTGAAGATCAAGGGTCTGTGCGAAGTGCCGGAAAACAGGGACGGTCCGCCACCCGTGAGCCTAAGTTCGCCGCCGAGGGAGTCCGGCACTCCGAGGTTGAACTACACGAAACTGAAGAAGCACCATCAGCGATACAAGAGACCCAGAATCGAGCGGCCGGCGTTCGAGTCGCGTTCCACCGATCCGAGACATTACGATCGCTACAAAGAGGAAGGGTTACAACCCAACAACGATTACAGCCGCGATAACAAAgagAACCATCGGGACTGGCAGGTTGAAGATGACGAGTGCACGGAgacagcaacaacagcagtaGCACTGGAAACTTGCCagcgtaataataataacaataacaacaacGGTAACGGCACGAGTAACAACGGTGACATGTTCTGTCACACAGGGCTAGGGCACTATGGCCACCATACGGATCCCGGAGACGTCGATTTGCCCCCCGAGACCCAACCCACTCCACCTAGCGCCACCCTGGTCGGCACCACCATCACCCATCTGAGGGATCCGGATCATCATTCTACAGAGATTCAAAATTGCGACAGCGTCAAGATCAAGTTCGAGACGCTGCACACGATGGACTCCTCAGACACGATCGACATAGACAGTCACATGTCGGATCGGGCGAGCGCAAGTTCGAAGAACGCCGCTGATAACGACAACATGATAATGATAACACCGGAGTTGCTGGGACTGATGCCATCGGGCAGCTCCGGCCAGTCGGACTCGGGTGAGACCAACTCGAGGGGGCACAGTGGACAGTCCAGCTCGCATCATCACAGCTCTAAATCGTGGACGCAGGAGGACATGGACGCGGCTTTAGAAGCGCTAAGGAATCACAACATGAGTCTGACTAAAGCTTCGGCAACATTCGGTATTCCCTCGACGACTCTGTGGCAACGGGCACATCGGCTGGGCATCGACACACCGAAGAAGGACGGTCCGACGAAATCTTGGAGCGACGAGAGTTTGAACAACGCTTTAGAAGCGTTACGCACCGGCTCCATTTCAGCTAACAAGGCGTCCAAAGCGTACGGTATACCTTCCAGCACGTTGTACAAGATCGCTAGGAGAGAAGGTATCAGACTGGCTGCACCATTTAACGCGAGTCCCACCACGTGGACACCTGCCGATCTGGATCGTGCTCTAGAAGCAATAAGATCCGGTCAGACGTCTGTTCAGAGAGCATCGACGGAATTCGGTATACCTACGGGAACTTTATATGGAAGATGCAAGCGAGAAGGAATCGAGCTTAGTAGGAGCAATCCCACGCCGTGGAGCGAAGATGCTATGACTGAAGCTCTCGAGGCCGTCAGATTAGGGCACATGAGCATAAATCAAGCAGCGATCCACTACAATCTGCCGTATTCGTCACTATATGGGCGCTTCAAAAGAGGCAAATACGAGGAACCCGTCGTTGGCGACCTCTCGCAGGACGGCACCAGTCCACATTTCCATCAAAGTCCCAACCAGAATCACTCATCCGCCCTTCCAGATCAAATGCCCTACCCGGGCAGCTGA
Protein Sequence: MVSGGMAGQHYCLRWNNYQSNMTSVFHQLLQTEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCKHPTIIMPQDVCFNDLKFIIEFVYRGEIDVSQAELQSLLKTADQLKIKGLCEVPENRDGPPPVSLSSPPRESGTPRLNYTKLKKHHQRYKRPRIERPAFESRSTDPRHYDRYKEEGLQPNNDYSRDNKENHRDWQVEDDECTETATTAVALETCQRNNNNNNNNGNGTSNNGDMFCHTGLGHYGHHTDPGDVDLPPETQPTPPSATLVGTTITHLRDPDHHSTEIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASASSKNAADNDNMIMITPELLGLMPSGSSGQSDSGETNSRGHSGQSSSHHHSSKSWTQEDMDAALEALRNHNMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGSISANKASKAYGIPSSTLYKIARREGIRLAAPFNASPTTWTPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVVGDLSQDGTSPHFHQSPNQNHSSALPDQMPYPGS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00279879;
90% Identity: iTF_01520386;
80% Identity: iTF_01015954;