Basic Information

Insect: Monochamus alternatus
Gene Symbol: BCL11B
Assembly: GCA_037114965.1
Location: CM073429.1:4553744-4569689[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 8.7 6.3e+02 2.6 1.2 1 23 181 204 181 204 0.93

2 6 1.2e-06 9e-05 24.2 3.0 1 23 478 500 478 500 0.96

3 6 4.7e-05 0.0034 19.2 5.8 1 23 506 528 506 528 0.98

4 6 1.9e-06 0.00014 23.6 3.2 2 23 717 738 716 738 0.97

5 6 2.5e-05 0.0018 20.1 3.3 1 23 744 766 744 766 0.99

6 6 0.00016 0.012 17.5 0.4 1 22 774 795 774 795 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	8.7	6.3e+02	2.6	1.2	1	23	181	204	181	204	0.93
2	6	1.2e-06	9e-05	24.2	3.0	1	23	478	500	478	500	0.96
3	6	4.7e-05	0.0034	19.2	5.8	1	23	506	528	506	528	0.98
4	6	1.9e-06	0.00014	23.6	3.2	2	23	717	738	716	738	0.97
5	6	2.5e-05	0.0018	20.1	3.3	1	23	744	766	744	766	0.99
6	6	0.00016	0.012	17.5	0.4	1	22	774	795	774	795	0.97

Sequence Information

Coding Sequence: ATGACAAAAATCGAAAAGCCAGCAGACGCAGACGGCGTAGAAGGAGACCCTCACCAAGACATCCTCACGTGCGGGGTGTGCCAGAAGCCCTTCGCCCTCTCGGACATAGTCCGCTTCATCCAGCACAAGGTTACAGCTTGCAACAAGGAAAACTTCGGCCAGTGCTACTCCAACAACGACAGGGATCGAGACAACGACGATGGCACGCTACCCCTGTCGACCATCAACACCAGGAGGCCGAGCATCTCTGCTCCCATCTCCGGCAAGAAGAGCGCCGGCAGCAGGGTGCATACCCCGCCGCCGGCGTCGCCGAGGTTGCCCGCCCCAGGTGACCTCTGCGTGGACGGAGCGGCTTCCTCGACGCCCAAGAGGAGGGCGTCGTCCCCGTTGACCAGCTCCAGCCTGGAAGAAGACATAAAGCCGAATATTAAGCAGGAGAAGATGGATACTACGATGTCTCCAGAGGAAAATAGTTGTAAGAGGTCGAGGACGGAAGTGGCAGATGCGGAATCCAACACGACGCATAGTGAGCCCAGTAACTACGTGTGTAGTACCTGCAAAGCTCGCTTACACTCAGCCTGGAGACTAGTGCAACACGTACAACATGCCCATGGTATCAAAATCTACGTGGAAAGTTCACCTACAAGTTCCAAAGGTACCAGCAGCAATAACCACAGCGGTGCCAGTTCAGCTAGCAATAGTTCCTCGGGCTGTTCCTCAGGAGGAGCTCCCCCACCACCACCAAACATGAGGCATCATCTGCTACCACCACCGGACTTACACAACCCATTTGGAGTTGGAGGATTGCTCAGGCTTCCCTTACCACCACTTAACCACGGACCGGTACCTCCAGCGCCTCTTTTTTCACGACCTGAACACCATTACAGGATCGACCAGTTGGTCAGCGAGCAATTTCGCCACCATGGCTTGAATCTGGCGGCAGCGGCTGCGGCTGTAGCTGCTGGAGGGGTACCACCTCCACATACAAGCTTCCCCTCGCCAGCGGAACGAGCTAGTTCTGTTAGTAGTCTTCCATCGAGGGAGAGGAGTACCCCCAACCAACCTTTATCATTGGAACCCCAGCTGGATTTTTACTCGCAGCGGTTGAGGCAATTGGCAGGCACCACCAGCCCGGGGGCGGCGCAGGCGAGCTCGCCGTCACCCCGCAAGCACTCACCGCCTTTCGCAAGTCCTTCCCCTTCCCAGCTGCCGCCCACTTCTATCCCCAACAACATTAGCTCGAGCAGTAGCAAcagcaacaacaacaataataataataacagtagcAACAGCGGGAACAGCAGCCGGCCTCCTAGCGCTTCGCCCCCCAATAACAAAGGAGACGACCAGATCACGAATACTCCGAGATCCGCCTCCACTCCTCCAGGGAAACCTGGCTCGCCGAGGAATTCCAACTCTGCGGAACCCATTCACGCTTGTGATTACTGCGGAAAGAAGTTCCGCTACCAAAACAACTTGGAAGTTCACCGTAGAACGCACACAGGAGAACTTCCTTACAAGTGTACCGTATGCGATCACGCTTGTTCGCAAAGTTCGAAACTGAAACGACATATGAAGCTGCACAGAACTCCTGAAGACCGCACCAGCAACGCGGGTTCGGTAGAAACATTAGAAGGCGATGATAGCGAGGAAGAAGACGAAATTGACGAAGAGGAAGAGGAAGAAGATGAGTTGGAAGAAGAGGAGGCGGAAGACCTGAGTGTGCCCAGTCAAATGTCAAAAAACGAGGGTAATCCATCAGCTTCACTCGTCGGTGAACTGATGGATAAATTTGGTTTGAGCAATATCGCCCAATACAGCGAAGCCTACAAGCAGGCCCTCCAAGAGTCCAACACAGCCCTTAAGCTTCAACTGGCCAGCAAAGATAGAGACAACAACAATACCAGCTTGAGCCAACTTAAAATTAGAGACGACTTCGCCAAAGGCTTGTTACCAGTCCCCCCGCCGCAACCCCTACCGCTGTTTCCTCCTTTCAACGACTCCTACGAAGCTACCAAAAGGATGAAACTGGACTTAGAACGTAGCGATTGGTGGCTGCCGGGTTTACCAAGAGAAAGCAAAGGAGTTCCTGGTCCCAGCGCCCTGCTACCCAACCCCTTACTGAAAAAGGAGAGCCGACGCAACGACACTTGCGAGTTTTGCGGCAAAGTgttcaaaaactgttcgaaCTTGACAGTGCACCGGCGATCTCACACGGGAGAGAAGCCCTACAAGTGCGAGTTGTGCTCCTACGCGTGCGCGCAAAGCTCGAAATTGACCCGTCACATGAAAACTCACGGCAGGATTGGGAAAGATGTGTACAGGTGTCGCTTCTGTGAGATGCCCTTCTCCGTGCCCTCTACCCTGGAGAAACACATGAGAAAATGCGTAGTGAACCAGGGTAAGGGACACCTCCTGGGCACCATGCCCATGCTGAGCGGCGACGAAGATTCCTCGACGAGTATTACTTCCAAAGAGGCCGTATGA
Protein Sequence: MTKIEKPADADGVEGDPHQDILTCGVCQKPFALSDIVRFIQHKVTACNKENFGQCYSNNDRDRDNDDGTLPLSTINTRRPSISAPISGKKSAGSRVHTPPPASPRLPAPGDLCVDGAASSTPKRRASSPLTSSSLEEDIKPNIKQEKMDTTMSPEENSCKRSRTEVADAESNTTHSEPSNYVCSTCKARLHSAWRLVQHVQHAHGIKIYVESSPTSSKGTSSNNHSGASSASNSSSGCSSGGAPPPPPNMRHHLLPPPDLHNPFGVGGLLRLPLPPLNHGPVPPAPLFSRPEHHYRIDQLVSEQFRHHGLNLAAAAAAVAAGGVPPPHTSFPSPAERASSVSSLPSRERSTPNQPLSLEPQLDFYSQRLRQLAGTTSPGAAQASSPSPRKHSPPFASPSPSQLPPTSIPNNISSSSSNSNNNNNNNNSSNSGNSSRPPSASPPNNKGDDQITNTPRSASTPPGKPGSPRNSNSAEPIHACDYCGKKFRYQNNLEVHRRTHTGELPYKCTVCDHACSQSSKLKRHMKLHRTPEDRTSNAGSVETLEGDDSEEEDEIDEEEEEEDELEEEEAEDLSVPSQMSKNEGNPSASLVGELMDKFGLSNIAQYSEAYKQALQESNTALKLQLASKDRDNNNTSLSQLKIRDDFAKGLLPVPPPQPLPLFPPFNDSYEATKRMKLDLERSDWWLPGLPRESKGVPGPSALLPNPLLKKESRRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRIGKDVYRCRFCEMPFSVPSTLEKHMRKCVVNQGKGHLLGTMPMLSGDEDSSTSITSKEAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01290764;
90% Identity: iTF_00110916; iTF_00722447; iTF_01227723; iTF_01290764; iTF_00886851; iTF_01370233;
80% Identity: -