Malt027272.1
Basic Information
- Insect
- Monochamus alternatus
- Gene Symbol
- dmd-4
- Assembly
- GCA_037114965.1
- Location
- CM073430.1:70902388-70908652[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8e-25 1.3e-20 74.4 11.0 1 47 9 55 9 55 0.98 2 2 0.029 5e+02 2.2 1.2 29 35 240 246 238 249 0.87
Sequence Information
- Coding Sequence
- ATGTTGTCTAACAGTAGAACAGCAAGAGTTCCCAAATGTGCTCGATGTCGAAATCACGGAATGATATCAACTTTGAGGGGTCACAAAAAGCagtgcatttataaaaattgcgCTTGTACCAAATGTGGACTCATCAAGGAAAGACAGCGAATAATGGCAGCACAGGTTGCGCTCAAGCGCCAACAGGCGGCGGAGGACGCCATAGCTCTCCATCTAGCATCAGCAGAAAGCGGAACGACCTATGAATACCTCCCTCCAGGTCGAATCTACGGAATGCAAGTCACCTCTCCCGAATCCGACTCATCCGATGCCACCGTAGACCCCCAATCCCCCCCAGAACAAAATCAAGAAGAAGTCTTAGTCAGCCCGGCTTCCATCGACATGCTCGCCAAGCTCTTCCCCAACAAAAAACGAGCTGTTTTGGAGTTGGTTTTGAAGCGGTGCAACCACGATCTTCTCAAGGCCATAGAACACTTTAATTTGAACAACGGTCATAAACAGGACGACTCAGACTCCAGCAGCTCGAAGACTGAATCCGCATCGGCTTTTAGACCTGTTGGAAGCTCGGTTAAAATGTCAAAGCCGTACATCAGTACTCATTCTGGTACGTTGCCCTTCATTTCGAGTAATAAGGTCTTCATGCACAGTTTGTATCCCTTTCTGCCACTGTTCAATCCACAACCAGTGCTGCCAAGTCCGGTGTATGTTCCGGGGTTTTGTGAGTGTGAACAGTGCAAGCATGGGCTCTACGGTAGGATAGATTCTTCTAGGCCGTAG
- Protein Sequence
- MLSNSRTARVPKCARCRNHGMISTLRGHKKQCIYKNCACTKCGLIKERQRIMAAQVALKRQQAAEDAIALHLASAESGTTYEYLPPGRIYGMQVTSPESDSSDATVDPQSPPEQNQEEVLVSPASIDMLAKLFPNKKRAVLELVLKRCNHDLLKAIEHFNLNNGHKQDDSDSSSSKTESASAFRPVGSSVKMSKPYISTHSGTLPFISSNKVFMHSLYPFLPLFNPQPVLPSPVYVPGFCECEQCKHGLYGRIDSSRP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00110578; iTF_01226943; iTF_00722068; iTF_00166133; iTF_01013371; iTF_01163165; iTF_01369437; iTF_01310549;
- 90% Identity
- iTF_00110578;
- 80% Identity
- -