Malt027336.1
Basic Information
- Insect
- Monochamus alternatus
- Gene Symbol
- -
- Assembly
- GCA_037114965.1
- Location
- CM073430.1:71882004-71883965[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-08 3.6e-06 28.1 0.0 1 40 14 54 14 58 0.89
Sequence Information
- Coding Sequence
- ATGCCgaagtttattaataaaaatatacgagGGCAATGGGACGAAGAGCATATGAGAACAGCAATTAGAAAAGTGCTTGATAACGAGTTAGCAATAAGAGATGCGGCAAAACGTTATGGTGTTCCTAAAAGTACTCTTGCTGATAAAGTAAAACACTTGAAAAATAACGAAGAAACACAACTTATTCCAAGTCTTGGACGATATCGCTGCACATTTCCCGCCAACTATGAACAGGAGCTTGTGAACCACATGCGGGATTTGGATAGTCGCCTAATGCCCCTCACCAAAAAAGAATTCTTAAAACTTGCGTTTGATGTGGCGGAGCGCTTAAAAATTCCACATAGATTCAACAGGGAAAAAAAGACTGCTGGGAAAGACTTTTACTACACTTTTCTCCAGCGCCATCCAGAGCTGTCTTTAAGAAATGCCGAGTCAACGAGTTTGCAGAGAGCAGTAGGCTTCAATCGACCACAAGTTGcaagattttttaacaaacttgaagatctaatgcaaaaatataactTCCGAgccaataaaattttcaacgcTGATGAAACCGGTGTGTCTACAGTCCACGAGTGTCGGCACAAAGTCGTCTCAATAAAAGGCAAGAAACAAGTTGGCAAAATGACTTCTGGAGAAAGGGGCCGCACTATAACCGTCTTATTGTGTATCAATGCAGCAGGAGATCAATTCATACCTCCACTATTCATTTTTcctaggaaaaaaattattgaccgACTGAAAATTGGAGCTCCGGAGAATGCCATGTTCCATGCACAGGACTCTGGCTGGATGAAtggtgacattttttttaaatggattcaggaatttgtaaaattcacACGTCCATCTGAAGAGGAGCCAGTTCTTCTAATTGTCGATGGGCATTGCAGCCATAAAGATTTACAAGTCATCAACTTTGCCCGGAAAAACCATATCCATATGTTAAGCTTACCCCCTCATTGCACCCATAAGCTGCAACCTTTGGATGTGTGTGTAATGAAGCCATTCAAGGATGCCTACAATGAAGCAGCGTCACGATGGATGAGGCAAAATCCGTTTATGAGAATTAGTGATTATGAAATCGCAGGCCTGGTGAACGACGCCTTTACGAAAATTTGCAGGATGGACTTATCTAAGAAGGGTTTTGAGTGTAGCGGAATTTATCCATTGAATTCGCAGATTTTCACGGACTTGGATTTTATTGCATCGCAAGGATTGGACGTCCCAGAACCAAGGGAAATTCATGCATCTACATCCACTATTGTTAAGAGATGTAACGAGACAGAAAGCGAGACAATAGACTCTCTAGAATTTCCAAAAATACCAACTTTACCAAATACTCCACCAAAGCTCAACGAACAAGAACTTCCTGgtacatctgaaaataaaacgCCCTCAAAAAAAGTCGTAAAACTGTGCACGTTAAATGAAACTTGCCAACCTTCGACTTCCAAAACCAGCCCCCAACGTTCTGAACAAAGAAATCCCACCATAGGCAGCAGAAAATCATCACAAAAAAATACTTTGGATCCAAAtacgatttttgaaaaaagtattagtGATCTTCTTAAAGAAATTTCACCAATTCCCAATGCTGCTGAACGTAGAATGGTTTCAAGAAAAAGACGTGCTGAAAAAAGTGAAGTGCTTACTTCCACTCCAtttaaaaatgagctggaagagaaaaataaaaataaggctaAAGgagtaaagaaaaatttaagtgAAAATGTTATTCTAgttgagaaaaaaattgcacaacagaagaaaaaaaaagCGCATAAAGAGAAGACTAAAGAAACCCAAGAACAAGAAAATGGGGAAACTTATTGTGTCATTTGTCAAGAATGTTTCGACGAAGACTGGATCCAGTGTTGTGAGTGTAAAAACTGGGTTCATGAGGCTTGTTCTGACGTGGAAAAAGGTCAGAAGTATTACAAGTGTGAtaactgttaa
- Protein Sequence
- MPKFINKNIRGQWDEEHMRTAIRKVLDNELAIRDAAKRYGVPKSTLADKVKHLKNNEETQLIPSLGRYRCTFPANYEQELVNHMRDLDSRLMPLTKKEFLKLAFDVAERLKIPHRFNREKKTAGKDFYYTFLQRHPELSLRNAESTSLQRAVGFNRPQVARFFNKLEDLMQKYNFRANKIFNADETGVSTVHECRHKVVSIKGKKQVGKMTSGERGRTITVLLCINAAGDQFIPPLFIFPRKKIIDRLKIGAPENAMFHAQDSGWMNGDIFFKWIQEFVKFTRPSEEEPVLLIVDGHCSHKDLQVINFARKNHIHMLSLPPHCTHKLQPLDVCVMKPFKDAYNEAASRWMRQNPFMRISDYEIAGLVNDAFTKICRMDLSKKGFECSGIYPLNSQIFTDLDFIASQGLDVPEPREIHASTSTIVKRCNETESETIDSLEFPKIPTLPNTPPKLNEQELPGTSENKTPSKKVVKLCTLNETCQPSTSKTSPQRSEQRNPTIGSRKSSQKNTLDPNTIFEKSISDLLKEISPIPNAAERRMVSRKRRAEKSEVLTSTPFKNELEEKNKNKAKGVKKNLSENVILVEKKIAQQKKKKAHKEKTKETQEQENGETYCVICQECFDEDWIQCCECKNWVHEACSDVEKGQKYYKCDNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01014297;
- 90% Identity
- iTF_01014297; iTF_01014304; iTF_01014298;
- 80% Identity
- -