Mmin010809.1
Basic Information
- Insect
- Molorchus minor
- Gene Symbol
- LRRFIP2
- Assembly
- GCA_029963825.1
- Location
- JAPWTJ010000412.1:127406-132779[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5e-32 1.6e-27 97.4 11.0 1 96 78 163 78 163 0.91 2 4 3.3e-36 1e-31 111.2 4.9 119 229 161 270 161 273 0.96 3 4 8.3e-12 2.6e-07 31.0 0.8 271 300 277 306 270 306 0.89 4 4 0.041 1.3e+03 -0.8 3.1 7 232 338 374 307 381 0.44
Sequence Information
- Coding Sequence
- ATGACAGAGAGTGAAGGTGTGTGCGCAAATTTACGCGACAGTGACACCCAAATTAGCAACCGTGAAGACGGCGATGATGAAATGGTGACCGTTGATGGTGTTACGGTGGCCGAAACGTCGGATTTTCTGGAGGAGAGTGGCAACTTCTGCGATTACAGTGGCGAGTCGAGCAAAGTGTTGGATAATGATAGTGACGTGATTCACTCATATATTCACAACACTACCGATGAAgcgGAAGCAAGACTGTGGGCCAAAAGACAGGCGAGGGCGGAGGCGAGGGAGATACGAATGCGCGAGCTGGAGCGCCAGCAGAAGGAGCAAGAGGAAAATGCCGACAGGCAGTTCGACATGCTGGCCGAGCCGTTGGCCCGGACGCCGAGAGGCCCCTCAGCCGGCAGCCGGTACCTGTCCAGTCGGAGGAGTTCCGAGGACTCTCTGGAAGATGGTGGCAGTCTTAGAGAATTGCGGCACGAACTCAAGGAGTTGGAACTATTAAAAGATAGGTTAGAAGAATTAGAGGAGGAACACTCCCAGCTCAAGAGGGAGCACCGGGAGAAGTGCAGGGAGCACGAGCAGCTAAAGAGGCTGTGCACCAAACTGCAGGATGATCTGGCTGTGACGAGGGCAGAGCTGGAAGAGAGGGACCGGCTCATAGCCGAGAAGGGACTAATTATAGTGGGAGAGGAGGTACCGCCCGACGAGGACGGTACAGTGCATCCACCCAAAAAAGTGCTGGTTAGCATTGAGAATGCGCAGTTATTGGAAGATGCAGGGGATGGCAGTTTAGATGTCCGGTTGGAGAGTCTCCTGAATGGCCCCTTTTCCGATTACGACTACGATGATATTCAAAGGGAAGCTAGTAAGCAACTCGCAGACTACAAGTTCAGGGCGCAGAAGGCTGAGCAGGACGTGGCAACGCTGCAAGCAACTGTCGCCCGACTCGAGAGTCAAGTCATCAGATATAAAACGGCTGCAGAGGTGTCCGAACAGTCGGAAGAAGCCCTCAAGGCAGAGAAGAGAAAACTGCAACGGGAGGCCAGGGACGCGCTGAGCAGAGCCGAGGAATTGGAGACGTCCAACACTCATTTACTTAAGAGATTAGACAAGTTAAAAAACGCCAAATCGGCGTTACTAAAAGAACTGTGA
- Protein Sequence
- MTESEGVCANLRDSDTQISNREDGDDEMVTVDGVTVAETSDFLEESGNFCDYSGESSKVLDNDSDVIHSYIHNTTDEAEARLWAKRQARAEAREIRMRELERQQKEQEENADRQFDMLAEPLARTPRGPSAGSRYLSSRRSSEDSLEDGGSLRELRHELKELELLKDRLEELEEEHSQLKREHREKCREHEQLKRLCTKLQDDLAVTRAELEERDRLIAEKGLIIVGEEVPPDEDGTVHPPKKVLVSIENAQLLEDAGDGSLDVRLESLLNGPFSDYDYDDIQREASKQLADYKFRAQKAEQDVATLQATVARLESQVIRYKTAAEVSEQSEEALKAEKRKLQREARDALSRAEELETSNTHLLKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -