Mang056233.1
Basic Information
- Insect
- Molanna angustata
- Gene Symbol
- -
- Assembly
- GCA_963576475.1
- Location
- OY754990.1:14094988-14096214[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.27 1.7e+04 -2.3 0.0 22 44 61 83 53 91 0.74 2 11 0.0012 75 5.3 0.0 21 43 88 110 80 118 0.89 3 11 0.014 8.8e+02 1.8 0.2 26 46 121 141 117 147 0.84 4 11 0.0002 12 7.8 0.0 21 47 144 170 138 176 0.83 5 11 0.036 2.2e+03 0.6 0.0 21 43 172 194 167 198 0.81 6 11 0.00017 10 8.0 0.0 21 48 200 227 186 231 0.80 7 11 0.004 2.4e+02 3.6 0.0 21 45 228 252 224 261 0.89 8 11 0.0018 1.1e+02 4.7 0.0 21 46 284 309 271 315 0.81 9 11 0.0006 36 6.3 0.1 21 47 312 338 308 344 0.84 10 11 0.015 9.3e+02 1.8 0.0 21 46 340 365 333 372 0.78 11 11 0.043 2.6e+03 0.3 0.0 20 31 367 378 351 391 0.71
Sequence Information
- Coding Sequence
- ATGGACACTAGCATAGTGATAAAAGAAGAAATTTATTCTCATGAAGAAGATTCCGTAAAAAATGATGATGATTcttctaaaacaaaaaatattcatgaacACATCAACGGTGAGAGAAGTGGGGAAACTTCTCAAAGTAATCTTAtaaagaagagtaaaaaaatacattcacaTACCAATGAAAAATCATTTGAATGTGACGTCTGTGGTAAAATATTTTCTGGAAGAGGTCAGTTGAATAGGCATAAACTAATTCACTCTGGTGAGAAACCATTCAACTGTGACATTTGTGGAAGGAATTTTACTCAGAATGGTGCATTGAAGAGGCACAATCTGACGCACTCTGGTGTAAAAGCCTTTGAATGCGAAGTCTGCCATAAAATTTTCTCGGAAAGGCGTACATTAATAAGACATAAACGAGTTCACTCTGGCGAGAAGCCTTTCGAATGCGACGTCTGCGGAAAGATTTTCGCCGAAAGTTTTAATTTGAAGAAACACAAACGAATTCATACCGGCGAAAAACCGTATGAATGTGATATATGTGGTAAAACGTTTTCTGAAAGTGGTCCGCTGAAGGGACATAAACGAATACATTCTGGTGAAAAACCATTTAAATGCGACATTTGTGGGAAAGTATTTACAGAAAATGGCCATTTAAAGAGACATAAACGATTTCACTATGGTGAGAAACCATTCGCTTGCGACTTTTGTGGTAAGATTTTTACTGAAAGTGGTCATTTGACAAGACATAAACGAATTCACACTGGCGAAAGACCATTCAAATGTGGCAGCTGTGATTTAGCGTTTTCTCATACTAGTGCTTTAAAAAATCATGAACGAATTCACTCTGGTGAGAAACCGTTTGAATGCGACATCTGTGGCAAGATTTTTTCCGAAAGTGGTTCACTAATGAAACACAAACGAATTCACTCTGGTGAAAAGCCATATGAGTGCGacatttgtaaaaaaactttttgtcaAAGTAGTTCATTAGTGAAACACAAACGAATTCACTCTGGCGAGAAGCCATTCGAATGCGACATATGTGGTAAAGCTTTTCCCGACGGTGGTCAATTGACAAGACATAAAAGAGTTCACTCCGGCGAAAAACCATACGAATGCGACATCTGTGGAAAGAAATTTTCTGAACGTGGTCATATGACTAGACACAAACGAACTCATTCCATCGGCAGAAAATCTAAAAAAGGCATTTCGACTAGCcactaa
- Protein Sequence
- MDTSIVIKEEIYSHEEDSVKNDDDSSKTKNIHEHINGERSGETSQSNLIKKSKKIHSHTNEKSFECDVCGKIFSGRGQLNRHKLIHSGEKPFNCDICGRNFTQNGALKRHNLTHSGVKAFECEVCHKIFSERRTLIRHKRVHSGEKPFECDVCGKIFAESFNLKKHKRIHTGEKPYECDICGKTFSESGPLKGHKRIHSGEKPFKCDICGKVFTENGHLKRHKRFHYGEKPFACDFCGKIFTESGHLTRHKRIHTGERPFKCGSCDLAFSHTSALKNHERIHSGEKPFECDICGKIFSESGSLMKHKRIHSGEKPYECDICKKTFCQSSSLVKHKRIHSGEKPFECDICGKAFPDGGQLTRHKRVHSGEKPYECDICGKKFSERGHMTRHKRTHSIGRKSKKGISTSH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01012577;
- 90% Identity
- iTF_01012577;
- 80% Identity
- iTF_01012577;