Basic Information

Insect: Mochlonyx cinctipes
Gene Symbol: -
Assembly: GCA_001014845.1
Location: JXPH01009502.1:1-7077[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.027 1.1 10.0 1.2 1 23 67 89 67 89 0.98

2 11 1e-07 4.2e-06 27.1 0.5 1 23 95 117 95 117 0.99

3 11 0.00016 0.0067 17.0 3.4 1 23 123 147 123 147 0.92

4 11 0.0016 0.069 13.8 0.6 1 23 186 208 186 208 0.98

5 11 0.001 0.043 14.5 3.0 1 23 214 236 214 236 0.99

6 11 0.023 0.94 10.3 3.0 1 23 332 353 332 353 0.98

7 11 4.4e-06 0.00018 21.9 1.9 1 23 365 387 365 387 0.98

8 11 8.1e-05 0.0034 18.0 0.9 1 23 551 573 551 573 0.99

9 11 1.5e-06 6.2e-05 23.4 6.0 1 23 579 601 579 601 0.99

10 11 2e-05 0.00081 19.9 0.5 1 23 607 629 607 629 0.98

11 11 0.00015 0.0063 17.1 0.5 2 23 635 657 634 657 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.027	1.1	10.0	1.2	1	23	67	89	67	89	0.98
2	11	1e-07	4.2e-06	27.1	0.5	1	23	95	117	95	117	0.99
3	11	0.00016	0.0067	17.0	3.4	1	23	123	147	123	147	0.92
4	11	0.0016	0.069	13.8	0.6	1	23	186	208	186	208	0.98
5	11	0.001	0.043	14.5	3.0	1	23	214	236	214	236	0.99
6	11	0.023	0.94	10.3	3.0	1	23	332	353	332	353	0.98
7	11	4.4e-06	0.00018	21.9	1.9	1	23	365	387	365	387	0.98
8	11	8.1e-05	0.0034	18.0	0.9	1	23	551	573	551	573	0.99
9	11	1.5e-06	6.2e-05	23.4	6.0	1	23	579	601	579	601	0.99
10	11	2e-05	0.00081	19.9	0.5	1	23	607	629	607	629	0.98
11	11	0.00015	0.0063	17.1	0.5	2	23	635	657	634	657	0.96

Sequence Information

Coding Sequence: ATGGATGAAGAACCGACAAGCGTTGAGATTAAAGTGGAGccggatttttattttccggAGCTAGGAGGCAGGTATTTTGAATCGGATGGCGAAGACGAGGATCTACAGGACGAGGAGGACTCTTTGGATTATCTTACGGACAAAAATAAGGATGCTCTAATTGAAAAGTACACAGTGCCCTTGGCAGATGGACGGGGATATAATTGTAAAGTTTGTGCAAAACTTTTGAAGAGTTCAAGTCATATTTTGGGCCATATTCGGACCCACACTGGCGAGAAACCTTTCAAGTGTGACATTTGCGAAAAATCTTTCAGCGAGTCTTCAAGTTTGaagGTACACATCCGTGTCCACACTGGCGAAAAACCTTTTGAATGCGTCGTTTGTAAACGACGATTCACACAGTCCTGTAATCTCCAGTCTCACATCAAAAGATCGTTGCATTACCCAGGGCAAGCACCTAAAAGACAAGGAGAACCATCAGGaagagtttttcagaaactacTTCCGAAAATAGTCCTAAAACCGCCAATTAACCACCCAATAGGAATTCTTCCGTTCAAATGTTGCGTTTGTGAAGAACCATTTTTCGATCAGGACCTTCTAATGATTCACGAAGAGACACATGCGCCAGAAACCCcttttaaatgtaaatattgtttCTCAATGTTTTCCATGCTGAAGAATTTCAGAGCGcacataaaaatacatattggCAGGAATGGCGTACAAAATGAAACAGAAAATAAACCACAAGTGCAGCAAATGAGAAGAAATTTTCCAAATACCCTACAAGCAAGACCACAATTTCCTACAGACATGAAAAATGGCCTAGAATACAAGCCCGTGATCTCACAACTCCAACAACGGCTTCAAATGCTCTCAAATCAAAGACAAATTCAGATACGAGCGCCGATCCAAGCGCCGGCACCTCCGAAAGCAGAAGTTCCGGCATCAAATCAAAAGATTGTTGTAACGGAGAACACAGAAAGACCATATCAATGCCTTGAATGCAAACAAAACTTCCCCAAGAACGAACTTTATCATCACATGAAGGTCCATCTGCACCAGCAAAACATTTTCCAGAAGAAAAAATACGAATGTTCAGTTTGCCAAAAGGTATTTGGAAAGTCGTACAATCTAAAAAGACATTTCATGACGCACGGAGAGTCAACAAGTCcaatcccaccaccacaatctgTTGATCCTGTTCCAATTACGCCAGAAGTTGATTTGGTCCGGATACCGAAAGAGGCTCCTCCAAACCTTATTCCCATTAACAAAAGTGCAAGCACAAATGGGACAAGTAACAATTTTCTgcacaaaatattgaatttaaaaaatgtccaGCTAGTGGCTTCAACGTCGAGCCAGCCAGCCAAAAAGGcgccaattttaataaatattaacaCAGAAGAAGACGATTTGTCCCGTCCACATTCCCAAGCGTCCAGCAACGGGGATAGCAGTTCGAAAGAAGGCGGCTTCATCATCAGCTCTGTAGCTTCTGTTGACCGGAGTtacctaaaaaaattggaccaACTCTCCGCTGAGTTGGTGAGCAAGAAAAAGCCACCCGGTGTTGAAACAGCAGCTTCAGGAAAGATTGCGGTGGTTGATGTGAAGAAATTGCTACAACAAAATCCGAATCCGTTCGAATGTCCATTGTGTCATAAAGTTATGTCTGAGGCGTTCAGCTTAAAGGTGCATATGAGGACGCATACAGGTGAACGCCCCTTCAAATGTAAATTGTGTAACAAAAAGTTCTCCCAGTCGTGCAACCTCAACACCCATATGCGAATACACAGTGGCGAAAAGCCATTCACCTGTGTCGTTTGCTTTAAATCTTTCACAAGGTCAGCATCTTTAAATGGCCACATGGCATCTCATACGTACGGCAAGATAAAATGTGTTGAATGCCATCAAATATTCATAAACGCATACAATTACACGAGGCACATTGAACGAGCACACCCGGATTTTATGTCCAAAATACCAGAGTACAAGGAAAGAGCAATGAAAAGATTTTACGAAAATCAACAAAGAATGATAAATTCGAACAACAGTTCATCGTCGGAAGCTTCCAGCTTTTCATCGTTTTCGCAACTGTTAGCAAAGACGGTGAAACCAGATAAATTTGAACCTGTTTTACCGGTTTCGATGGTGCAATCCaagcaaattattaaaataaaaacagaaaataagacGGAAGAGATTAGTTCGAACTCAGCCAACGACAGTGATTACGATGAATCAGATTATAATGACAGTGATACTGACTGGCCGCCGCCAAGGAGCGTTACTCAGGCGAAAAAACAGAATCTTGATGATATTAGTATCAACAGAGTTAAAACTAGTACTAGGTCTACC
Protein Sequence: MDEEPTSVEIKVEPDFYFPELGGRYFESDGEDEDLQDEEDSLDYLTDKNKDALIEKYTVPLADGRGYNCKVCAKLLKSSSHILGHIRTHTGEKPFKCDICEKSFSESSSLKVHIRVHTGEKPFECVVCKRRFTQSCNLQSHIKRSLHYPGQAPKRQGEPSGRVFQKLLPKIVLKPPINHPIGILPFKCCVCEEPFFDQDLLMIHEETHAPETPFKCKYCFSMFSMLKNFRAHIKIHIGRNGVQNETENKPQVQQMRRNFPNTLQARPQFPTDMKNGLEYKPVISQLQQRLQMLSNQRQIQIRAPIQAPAPPKAEVPASNQKIVVTENTERPYQCLECKQNFPKNELYHHMKVHLHQQNIFQKKKYECSVCQKVFGKSYNLKRHFMTHGESTSPIPPPQSVDPVPITPEVDLVRIPKEAPPNLIPINKSASTNGTSNNFLHKILNLKNVQLVASTSSQPAKKAPILININTEEDDLSRPHSQASSNGDSSSKEGGFIISSVASVDRSYLKKLDQLSAELVSKKKPPGVETAASGKIAVVDVKKLLQQNPNPFECPLCHKVMSEAFSLKVHMRTHTGERPFKCKLCNKKFSQSCNLNTHMRIHSGEKPFTCVVCFKSFTRSASLNGHMASHTYGKIKCVECHQIFINAYNYTRHIERAHPDFMSKIPEYKERAMKRFYENQQRMINSNNSSSSEASSFSSFSQLLAKTVKPDKFEPVLPVSMVQSKQIIKIKTENKTEEISSNSANDSDYDESDYNDSDTDWPPPRSVTQAKKQNLDDISINRVKTSTRST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01011899;
90% Identity: iTF_01011899;
80% Identity: iTF_01011899;