Mcic012377.1
Basic Information
- Insect
- Mochlonyx cinctipes
- Gene Symbol
- Smarca5
- Assembly
- GCA_001014845.1
- Location
- JXPH01054089.1:1-2612[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.3e-07 0.00063 20.0 0.0 3 41 3 42 2 42 0.95 2 3 0.00054 0.79 10.1 0.1 3 21 105 124 103 131 0.90 3 3 2 3e+03 -1.4 0.0 30 45 148 163 147 164 0.84
Sequence Information
- Coding Sequence
- TTCACAAACTGGAGCAAACGTGACTTCAATCAATTCATCAAGGCAAACGAAAAATACGGACGGGATGACATTGAAAATATCGCAAAAGAAGTCGAGGGAAAAACTCCCGAAGAAGTCATGGAATACAGCGCAGTATTTTGGGAACGTTGCCACGAGCTACAAGACATTGAGCGTCTAATGGGACAAATTGAAAGGGGAGAAGCGAAAATACAAAGACGAGCTTCCATTAAGAAAGCTTTGGATGGAAAGaTGTCCCGCTATCGCGCTCCCTTCCATCAACTCAGAATCGCATACGGAAATAATAAAGGTAAAAATTACACAGAAGAAGAAGATCGTTTCTTGGTGTGCATGTTGCACAAACTCGGATTCGATAAAGAGAATGTTTACGAAGAGCTTCGAGCAGCTGTACGTTCCGCGCCGCAATTCAGATTTGACTGGTTCTTGAAATCGCGAACAGCATTGGAATTGCAGCGTCGTTGCAATACTCTAATCACATTAATCGAACGAGAGAACCAAGAGATTGAGGAGAAGGAACgtttagaaaagaaaaagaagaatggCCCGATGCCGGGGGTACAAAAAACGACGCAGAAAAGGAAATTGGACGCGACCACAGCACCTGGCGataagaatattaaaaaaaagaaaaaggctTAA
- Protein Sequence
- FTNWSKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELQDIERLMGQIERGEAKIQRRASIKKALDGKMSRYRAPFHQLRIAYGNNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRAAVRSAPQFRFDWFLKSRTALELQRRCNTLITLIERENQEIEEKERLEKKKKNGPMPGVQKTTQKRKLDATTAPGDKNIKKKKKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00225848;
- 90% Identity
- -
- 80% Identity
- -