Bpol009303.1
Basic Information
- Insect
- Bombus polaris
- Gene Symbol
- Smarca5
- Assembly
- GCA_014737335.1
- Location
- JACXIO010000100.1:10221-10960[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.4e-07 0.00035 20.9 0.0 3 41 34 73 33 73 0.96 2 3 0.00099 1 9.8 0.0 3 21 136 155 134 159 0.90 3 3 4.5 4.6e+03 -1.9 0.0 31 45 180 194 178 195 0.83
Sequence Information
- Coding Sequence
- AGAATTCAAAAAGAAGAACAACGTAAGATAGACGAAGCTCAACCATTAACCGATGAAGAAGTTGCAGAAAAAGAGAAACTGCTTACTCAAGGCTTCACAAACTGGACGAAGAGAGATTTTAATCAATTCATAAAAGCTAATGAAAAATACGGTCGTGATGATATTGAGAACATAGCCAAGGAAGTAGAAGGAAAAACTCCTGAAGAAGTGATGGAGTACTCGGCTGTTTTTTGGGAAAGATGTCATGAGTTACAAGATATAGATAGGGTAATGGCTCAAATTGAACGAGGAGAAGCAAAAATACAGAGACGAGCTGGGATTAAGAAAGCCTTAGACGCGAAAATGGCAAGGTACCGTGCACCTTTCCATCAGTTGAGGATGGCGTACGGAACGAACAAAGGTAAAAATTACACCGAAGAAGAAGATCGATTCCTCGTGTGTATGTTGCACAAGCTGGGCTTTGACAAGGAAAACGTATATGAGGAACTTCGTGCCACGGTCAGATCGGCGCCACAATTTCGTTTTGACTGGTTCGTAAAGTCTCGTACAGCTTTAGAACTTCAGCGGCGGTGCAACACGCTAATTACGCTCATCGAGCGCGAGAATCAAGAACTGGAGGAGAGAGAGAGACAGGAAAGGAGAAAAAAAGGCGGCAGTATTGGTGCAAAACCTGCGTCCAAGCGAAAACAAGAGAACCTACCAGCACCACAAGACAAACCGCGGAAAAAGAAGAAATAA
- Protein Sequence
- RIQKEEQRKIDEAQPLTDEEVAEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIENIAKEVEGKTPEEVMEYSAVFWERCHELQDIDRVMAQIERGEAKIQRRAGIKKALDAKMARYRAPFHQLRMAYGTNKGKNYTEEEDRFLVCMLHKLGFDKENVYEELRATVRSAPQFRFDWFVKSRTALELQRRCNTLITLIERENQELEERERQERRKKGGSIGAKPASKRKQENLPAPQDKPRKKKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01011164; iTF_01467037;
- 90% Identity
- iTF_01467037;
- 80% Identity
- -