Mcic011362.1
Basic Information
- Insect
- Mochlonyx cinctipes
- Gene Symbol
- Rel_1
- Assembly
- GCA_001014845.1
- Location
- JXPH01027509.1:9517-16284[+]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.4e-50 4.3e-46 157.1 0.9 1 168 108 292 108 293 0.93 2 2 3.2 1.7e+04 -4.2 0.2 115 138 790 812 776 831 0.52
Sequence Information
- Coding Sequence
- ATGTCTACAAtattaaatttggataataataCGTATCGTCATGAATTTTATGACCATCAAACCGTCCTTTCGTCATCACCAACCTACTCAATTTTATCAATGGAGTCGTCATCGCCTAGCGATGGGAAATATTTTACAAACTCCCCATCCAGCGTCAGCAACATGTCACCACAGTCCACCACAAGCGAAGCAAGCAGTTCGtacaatattcaaaatttgaacattacGCCAAATTACGAAATATCAttctacaatccacaaacccaATCACAAACACCAGTCTACTCTTATGTGCTGGCAGCAAATCCAGCAATTCCAATGCTCGAAATAACTGAACAACCTGTTGACAAATTCCGTTTTCGCTATCAGTCTGAAATGCATGGGACACACGGTTCTCTTATGGGATTCAGGACAGAAAAGtctaaaaaaacttttccaacaGTCGAATTGAAGGGTTTCCATGGAAAAGCCAAAATAAGATGCTCCCTTTACCAAGTGGATCCATTACGAAGAAGCGCCCATTCCCATCATTTAGTGATTAAGAATGGGGATGTTGATCTAAACGATCCTCACGACATTGATGTTTCTACCGAAAAAGGATATAAAGCCGTCTTCCAAGGTATGGGAATTATTCATACAGCAAAGAAAAATATCGCTGAAGAGTTGTAcaagaaaatgaagaaagaaaaagcTCTCGAAGAAAATCGGGATCTAACCCTTCGCGAAGAACATCAGCTGCAAAAAGAAGCTTCCGAACAATCAAAGACGATGAATTTAAATCAAGTTTGCTTACAGTTTCAAGCGTTTCAAGTGGATTCAAACACAGGAAATTGGCTTCAAATTTGTGAGCCCGTTTATTCGAATGCTATTAATAATATGAAAAGCGCTTTAACTGGAGAGTTAAAGATCTGTAGATTAAGCACGGCTGTTAGTAGTGTTGATGGTGGTGAAGAAGTATTTATGTTCGTCgaaaaagtttgtaaaaataacataaaaataagattttacgAACAAGATgagtttgaaaatgaaatttggcaCGATTGGGGCGTTTTCTCAGAGGTGGATGTTCACCATCAATACGGGATTGCATTCAAAACTCCTCCCTACAAAGATAAAGAAGTGAGCGAAAATGTTGAAGTTTTCATTCAGCTCTACCGTCCTCGTGACAAATGCACAAGTGAAGGCGTTCCTTTCAAATACAAGCCTCGCAATAGCAACAATAACAGCAGTTCATCAAGAAAAAGGCAACGTGTCAGCTCAACAACATCTTCATTTGAACTTCCAACAGTTCTTGCAAACGTTCCCAGTTGCAGCAATCAAAACAATCACAATATGGAAGACATAACGTTAAGCAAAGAGTTTAATAAAGCAGGAATTATACAGGAAATATTGGATAGTCAAGTGCCGGCAACAATCTCAAATGATATCTCATTTActtcaaatgattttaaaaatttcgtgCAGTGTGATTCGGaagaactcCACAAATTGATCTTCGAAATTGAACAGGGACAAGAACTCTCAAAGCTGGAAACGGATTCTGTGAAAGTGACAGAAGTCAAGAAGGAAGATGAAAATATTCTCAATCTCTACTTGAACAATAAAGAGAAGAGCGAAGACATGAACGCGCTGAAAAAGATTTTCACGATAATCAAACTGTTTTACCgtgattttgaaaaatgccGGAGCTTAATTTCGGCATTGTGGATGTCGGGAAATAAAGAGGGAATCAACTGTCTGAATTCGGCAATCGAGCATAATGATgaagtgatttttgaaaaactaatagATCTTTTAGAAGAGTACAAGCTGCAAGACCTTTTAGACCTTGCAAACATCAGAAATGAAACAAGTTTACATATCGCAATCGTAAATAAACGAttagaaattgtaaaaaaattacttaaatcTGGCGCAAATGTAAACTGTTGCGACTATAACGGAAATTCAGCGCTTCAACGCGCTGTTATTGAATCATCTTCTAATTGCGTTGAGGAAATATTGAAGAATTGTAAAAAACTCAAGATTGATTCATCAAATGACGAGGGATATTCCGCACTTCACTTAGCTGTGAGgagtaaaaatctgaaaatcaccaaaattttagttcaaaatcAAGCTTCTGTACATTTAAAAGGCCTAAAGcttggaaataatattttgcatttggctgttgaaaatGACGCATTAGATTTGGTGCAGTACATTTTAGAGAACGTGGACGAAAATCTATCAAACGAGCCAAACAATTCAGGATACACTCCATTCCAATTAGCCTGCGCTAGAAATTCGTCGAATCCAAGCACAAAATTGATTGTTCGTGAGCTTTTAAAGCACAATCCTGAACTAAAAGAGACAAAAATAGAGGAAGATAGTGAAGAGAACGACGAGGAAACTGAGGAAAATGTTTTGAGCTCAATGAATCTTACCTGCAATAGAGCAGAAGTTATTAATTTCTTAGAAGAACATACCCCAGCTGATGAAAGGCAGGAACAAGTACGAGAATGTGTGATAAAATGTGCCCCAAAATCTCTTTTCGATGAAACGTGCCTAAAGCAGCtgagtaaaattttcaataacgacaaatcttggctaaaattagCTTCTGTTCTTGATTTTGGAGCATTTGTTGATGTCTGGGAAGCATCTGAGAAGCCAGCGGAAAtgctttttaattattttgagatgCAACAAATGCAGCTTGATAATCTGTTGGGCGTTTTTGAAGCTCTCGACAATAAGGATGCAATAAGAGCAATTGATGAAATGATCTGTCGTCAAATGGAAggctaa
- Protein Sequence
- MSTILNLDNNTYRHEFYDHQTVLSSSPTYSILSMESSSPSDGKYFTNSPSSVSNMSPQSTTSEASSSYNIQNLNITPNYEISFYNPQTQSQTPVYSYVLAANPAIPMLEITEQPVDKFRFRYQSEMHGTHGSLMGFRTEKSKKTFPTVELKGFHGKAKIRCSLYQVDPLRRSAHSHHLVIKNGDVDLNDPHDIDVSTEKGYKAVFQGMGIIHTAKKNIAEELYKKMKKEKALEENRDLTLREEHQLQKEASEQSKTMNLNQVCLQFQAFQVDSNTGNWLQICEPVYSNAINNMKSALTGELKICRLSTAVSSVDGGEEVFMFVEKVCKNNIKIRFYEQDEFENEIWHDWGVFSEVDVHHQYGIAFKTPPYKDKEVSENVEVFIQLYRPRDKCTSEGVPFKYKPRNSNNNSSSSRKRQRVSSTTSSFELPTVLANVPSCSNQNNHNMEDITLSKEFNKAGIIQEILDSQVPATISNDISFTSNDFKNFVQCDSEELHKLIFEIEQGQELSKLETDSVKVTEVKKEDENILNLYLNNKEKSEDMNALKKIFTIIKLFYRDFEKCRSLISALWMSGNKEGINCLNSAIEHNDEVIFEKLIDLLEEYKLQDLLDLANIRNETSLHIAIVNKRLEIVKKLLKSGANVNCCDYNGNSALQRAVIESSSNCVEEILKNCKKLKIDSSNDEGYSALHLAVRSKNLKITKILVQNQASVHLKGLKLGNNILHLAVENDALDLVQYILENVDENLSNEPNNSGYTPFQLACARNSSNPSTKLIVRELLKHNPELKETKIEEDSEENDEETEENVLSSMNLTCNRAEVINFLEEHTPADERQEQVRECVIKCAPKSLFDETCLKQLSKIFNNDKSWLKLASVLDFGAFVDVWEASEKPAEMLFNYFEMQQMQLDNLLGVFEALDNKDAIRAIDEMICRQMEG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -