Mtil018995.1
Basic Information
- Insect
- Mimas tiliae
- Gene Symbol
- -
- Assembly
- GCA_905332985.1
- Location
- HG995238.1:5011144-5016306[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.0071 0.49 11.3 0.6 1 21 64 84 64 85 0.95 2 21 0.84 58 4.8 0.1 3 23 114 134 112 134 0.94 3 21 0.0017 0.12 13.3 0.8 2 23 156 177 155 177 0.97 4 21 0.0014 0.096 13.6 0.4 1 23 181 203 181 203 0.95 5 21 0.037 2.5 9.1 0.2 1 23 208 231 208 231 0.90 6 21 0.051 3.5 8.6 1.3 1 23 237 260 237 260 0.94 7 21 0.0086 0.59 11.1 0.9 1 23 267 290 267 290 0.95 8 21 1.4e-05 0.00099 19.8 1.7 1 23 297 319 297 319 0.97 9 21 0.082 5.7 8.0 0.2 1 23 400 423 400 423 0.96 10 21 0.99 68 4.6 0.0 2 23 450 471 449 471 0.95 11 21 0.18 13 6.9 3.6 1 23 493 515 493 515 0.98 12 21 8.7e-06 0.0006 20.5 1.1 1 23 519 541 519 541 0.98 13 21 0.019 1.3 10.0 0.4 1 23 575 598 575 598 0.87 14 21 0.052 3.6 8.6 0.5 3 14 607 618 605 620 0.91 15 21 0.67 46 5.1 0.5 1 23 670 692 670 692 0.93 16 21 1.5 1.1e+02 4.0 0.1 2 23 718 740 717 740 0.92 17 21 0.0072 0.5 11.3 1.5 1 23 762 784 762 784 0.98 18 21 0.00044 0.03 15.2 3.6 1 23 788 810 788 810 0.97 19 21 0.23 16 6.6 0.1 1 23 815 838 815 838 0.94 20 21 0.095 6.6 7.8 1.4 1 23 844 867 844 867 0.93 21 21 0.032 2.2 9.3 0.1 1 23 873 896 873 896 0.96
Sequence Information
- Coding Sequence
- ATGCGCGAACTTCGTTTAACAACAGATGAGAATCTTAAAATCAAGACAAATAAAGCGCCGAAAGAAAAAACAAAGAAAAACAAATACAAAAGAAGTGCACGTTCTGAAGCTAGGATAATCACTAAGAAAAACGCTGCAGCTATATTGGAGTGTTGGACGATGTGCCCATTCAGATGGAAAAAGAACCGATTCAGGTGTGCATATTGCGAAAATTACTTCACTGATTCCCAGTCATTGAGGACACACGTGAAGCTGTGTTCGACACAACACACCATCAATGATATTTACAACAAGTACAAAGAGATGCCGTTAATCAACATCGATGTCGTTGGAAGTATTTGCGTATTCTGTTCCGTTCCGTTCACTGATGTAAAACAAATGCGAGACCACGTTATACAACACGGGCTTGACTTTGACTGCAGCCATCCTGAAGGAGTCCTTCCCTTCTATTTAGACAAGGAATGGAAATGTGTTATATGTGAGAAGCAGTTCAACAATTTTTTAAAGCTTTATGAGCATATGAACACACACTATCAGCATTATATATGTGCGACGTGTGGCAAAGGTTTTATGACGTCACAGAGGTTAAGGAAGCATTCTGAAGTTCATATAAGTGGTTCATTCCCTTGCAACCTGTGTGAAAAAGTGTTTACTATGAGAGGGGCGCGAGATTCGCATAAAGCAACGGCGCATGCGAAAGGACCGCGGTACGAATGTCCGCACTGCAGTTTGAGATTCAAAATATATTACGAAAGAATGGAGCATCTCAAAGAAGCTCACAGACAGACTGAAGTGTTATATCGTTGCGTTCACTGCGAGCTGTCCTTTAAAACGAGCGGCAAACGAGCCGCCCACGTGTCATCGGTACACTTTCCACCGGAATACGACTACGACTGTATGTACTGTGAGAAGCTGTTTAAGTCGAACTATGACCTTAAAAGACATATGGCCAGACATTCAGGAGAAAGAAACTTTCATTGCCATATTTGTCCCGCCGCCGAGGCGGAGTTAGGCATTAAACGAGGTAGGAAGTTAAAGGAAGTAGTGACACCGCGGCAGATGCGTAGACGGCGTCGCGCCAACAACGAGCTACCCGAAGAATCGGAGAAACGCATCGCTAAAACAATGATGCGGCGGAATGCTATGACTATTTTAGAATGTTCCACCGCCTGGGCCTTTAGATGGTTCCACGGTGCATTTTACTGCTCTTACTGTGAAGCCAAATACGTGGATATAAATCCATTAAGAGAACATGTCCGTCTGAATCACTTAAACCAGCCACCCACGAAAAATATTTTCTCTAAGTTAACGGAAAATAACATGGTTAAAGTCGATGTAGCTGACCTTAGTTGCAGGCTTTGCAATCGCGTATTGAGCGGAATAGGGCCTTTGAAAGAACACTTGTTGATACACAATAAGCCTCTGAATACTGATTACAGCGACGGAGTACTTCCTTTCAAGCTTGACGATGACGGCTTTTATTGTCAGATATGTTTCACTCACTTTTATAATTTCGCCCGGGTCAATGAGCACATGAACAGCCATTATCAGAACTATATTTGCGACACATGCGGCAAGGCGTTCGTATCTAAATCTCGGTTTAGGAAGCACGTGCAATCACATGAGAAAGGGAGCTTCCCTTGCGGCTCGTGCGACGAAGTGCTGGAGACGCGAGCTTCCAGAATGTTCCATAGGATGCGCGTACATCGCAAAGGCATTCGGTACACGTGTCCTCGGTGCCCTGAAGTGTTCTCATCATATCACGTCAGAGTACGCCATCTTATAGACGTTCACGACCAGCAGAAGATCGAATATGGTTGTGATATTTGTGGAAAAACTTTCGAAACGAGCTCCAAACGATTGAGTGAAGACTTGAAGAAACCAGAAGGTGGCGCGGTTAGAGTGGTGTGGAAGCGTAAGAGAGGGGTATTGATCGAGGATAAGGCAAATGCCGCTATGATCCTAAAGTATTCCAACGCCGTTGTATTCAGATGGCAGAGAGGGAAGTTTATGTGCGCATATTGCCCTCAAAAATGTATTAACGTTGCTGAAGTTCGTTCACATTCAACGATACACAATAATAAACTCGACATTTTTGAAAAACCACAAGTACGGAACACGTTTCCGTTAAGAATCGACGTAACTGATCTATCTTGCGAAATTTGCAAACAAGGAGTACAAAGTATAGACGGTTTCAAAACTCATATAGCTCAAGCGCATTCGCATAAAGTGAACCCAAAGTATACTGACGGGGTGATACCATTTGTTCTGACTGAAAAACATTTCAAATGCGTCCACTGCGGTGCACAATTCGAAGGGTTCATGAAACTGTTCATTCACATGAACAGTCATTATCAGAGTTTTATTTGTCATATATGTGGAAAAGGGTACTCAGCGAAACACAAGTTGCGTTCTCATAGAGAGAGTCATGAGTTAGGAGAATTCCAATGCACCAGGTGTGATATGGTGCTACCCAGTCGACCGGCTAAGAACAGGCATGTGGCATCGGTGCATGCACGCAAGGAGAAGTACAGATGCCCTTTATGCGATATGTATTTTGATTCGTACCACTCTAGAGTGACCCATTTGGGTAAAATTCACGGGCAGAAGGCTGAATACCGATGCAACTTATGTCCAGCGGTATTCGGGACAGCTGCCTTAAGATATTCACATATAAAGTTGACTCATATGAAGAAGAAGAAGAAAAATTCATAA
- Protein Sequence
- MRELRLTTDENLKIKTNKAPKEKTKKNKYKRSARSEARIITKKNAAAILECWTMCPFRWKKNRFRCAYCENYFTDSQSLRTHVKLCSTQHTINDIYNKYKEMPLINIDVVGSICVFCSVPFTDVKQMRDHVIQHGLDFDCSHPEGVLPFYLDKEWKCVICEKQFNNFLKLYEHMNTHYQHYICATCGKGFMTSQRLRKHSEVHISGSFPCNLCEKVFTMRGARDSHKATAHAKGPRYECPHCSLRFKIYYERMEHLKEAHRQTEVLYRCVHCELSFKTSGKRAAHVSSVHFPPEYDYDCMYCEKLFKSNYDLKRHMARHSGERNFHCHICPAAEAELGIKRGRKLKEVVTPRQMRRRRRANNELPEESEKRIAKTMMRRNAMTILECSTAWAFRWFHGAFYCSYCEAKYVDINPLREHVRLNHLNQPPTKNIFSKLTENNMVKVDVADLSCRLCNRVLSGIGPLKEHLLIHNKPLNTDYSDGVLPFKLDDDGFYCQICFTHFYNFARVNEHMNSHYQNYICDTCGKAFVSKSRFRKHVQSHEKGSFPCGSCDEVLETRASRMFHRMRVHRKGIRYTCPRCPEVFSSYHVRVRHLIDVHDQQKIEYGCDICGKTFETSSKRLSEDLKKPEGGAVRVVWKRKRGVLIEDKANAAMILKYSNAVVFRWQRGKFMCAYCPQKCINVAEVRSHSTIHNNKLDIFEKPQVRNTFPLRIDVTDLSCEICKQGVQSIDGFKTHIAQAHSHKVNPKYTDGVIPFVLTEKHFKCVHCGAQFEGFMKLFIHMNSHYQSFICHICGKGYSAKHKLRSHRESHELGEFQCTRCDMVLPSRPAKNRHVASVHARKEKYRCPLCDMYFDSYHSRVTHLGKIHGQKAEYRCNLCPAVFGTAALRYSHIKLTHMKKKKKNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341576;
- 90% Identity
- -
- 80% Identity
- -