Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995238.1:4986491-4993159[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.75 52 5.0 2.0 1 19 28 46 28 50 0.80

2 18 0.0029 0.2 12.6 0.2 2 23 78 100 77 100 0.96

3 18 7.5e-05 0.0052 17.6 3.5 2 23 124 145 123 145 0.97

4 18 0.045 3.1 8.8 0.2 2 23 149 170 148 170 0.95

5 18 0.0023 0.16 12.9 5.2 1 23 175 198 175 198 0.96

6 18 0.66 45 5.2 3.6 2 23 210 232 209 232 0.94

7 18 0.0049 0.34 11.8 0.5 1 23 238 261 238 261 0.96

8 18 6e-07 4.1e-05 24.2 1.7 2 23 266 287 265 287 0.97

9 18 1.6 1.1e+02 3.9 1.6 1 23 334 356 334 356 0.97

10 18 0.007 0.48 11.4 1.6 2 23 384 406 383 406 0.95

11 18 8e-05 0.0056 17.5 2.3 1 23 429 451 429 451 0.98

12 18 0.18 12 7.0 0.6 2 23 456 477 456 477 0.95

13 18 0.00046 0.032 15.1 1.6 1 23 482 505 482 505 0.90

14 18 1 70 4.6 4.0 2 23 515 537 514 537 0.88

15 18 0.00011 0.0076 17.0 0.7 1 23 543 566 543 566 0.97

16 18 0.0075 0.52 11.3 4.1 2 23 571 592 570 592 0.97

17 18 5.3e-05 0.0036 18.0 6.0 1 23 598 620 598 620 0.97

18 18 0.00028 0.019 15.8 0.3 1 23 629 652 629 652 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.75	52	5.0	2.0	1	19	28	46	28	50	0.80
2	18	0.0029	0.2	12.6	0.2	2	23	78	100	77	100	0.96
3	18	7.5e-05	0.0052	17.6	3.5	2	23	124	145	123	145	0.97
4	18	0.045	3.1	8.8	0.2	2	23	149	170	148	170	0.95
5	18	0.0023	0.16	12.9	5.2	1	23	175	198	175	198	0.96
6	18	0.66	45	5.2	3.6	2	23	210	232	209	232	0.94
7	18	0.0049	0.34	11.8	0.5	1	23	238	261	238	261	0.96
8	18	6e-07	4.1e-05	24.2	1.7	2	23	266	287	265	287	0.97
9	18	1.6	1.1e+02	3.9	1.6	1	23	334	356	334	356	0.97
10	18	0.007	0.48	11.4	1.6	2	23	384	406	383	406	0.95
11	18	8e-05	0.0056	17.5	2.3	1	23	429	451	429	451	0.98
12	18	0.18	12	7.0	0.6	2	23	456	477	456	477	0.95
13	18	0.00046	0.032	15.1	1.6	1	23	482	505	482	505	0.90
14	18	1	70	4.6	4.0	2	23	515	537	514	537	0.88
15	18	0.00011	0.0076	17.0	0.7	1	23	543	566	543	566	0.97
16	18	0.0075	0.52	11.3	4.1	2	23	571	592	570	592	0.97
17	18	5.3e-05	0.0036	18.0	6.0	1	23	598	620	598	620	0.97
18	18	0.00028	0.019	15.8	0.3	1	23	629	652	629	652	0.95

Sequence Information

Coding Sequence: ATGACCATCGCAGAAAGACAAAACGCGGCGACATTCCTAGAGTACACCACGATCAAGCCATTTTATTACCAGCAAGGGAATTTCAAATGCTTTTACTGCAACGAAGTGTTTCCTGAAATTCATTCAGTATTAGAACATTCCTTCTTCCATTCCACACCTGACAGATCAAGTTTGCTAAAACAACATTTGAGGAAAGGAAAAAGGGTGATAAAAGTTGATATTTCGAGTCTACAATGCAGAATTTGCGAGCAAAAATACTCTGATTTGGAAGATATCAGGAAGCATCTAAATGTTGTTCACAAAAAGGAGTTCAATTCAGCTGGGAATGGTCTAATGGCATATAATCTTAATCTCGTCAATGGTCTTTTATACTGCCATAAATGTGCTAAGAGTTTTAATACATTCTTCCTCTTGAACAGGCATATGAATGTACACTTTAACGTGGTGTGCGAAGTGTGCGGTCTCGGATTCATGTCACATCAGAGGTTGATCAACCACAGAGTTGTACATCAGAACGGGATACATGTATGTGATAAATGCCACGAAGTGTTCTCAACTAAACTGAAGCTCCGATACCATTTGCTCAAGAAACATGAGGTGAATAACGCAAAAAAAATGAAACCTTTGAAATGTCCACATTGTTTGGAAAGATTCTCGGAGCATTACCGTAAGATGACACACTTGCGGGAAGTACACGGGATTACGTTTACTTTTGAGTGCCCAGTTTGCAAAACCGTGTTTCTCACGCGGCGTGCTTTAACAGAACACACTACCAAGTTACATACACAGAAAATACAGTGTAAAGTTTGTGGGAAATGTTTCGGAACGAAATCTCTGCTGAAAATGCATATACGAGGACATAGTGGTACGAAAACAGAAGATCGACAACGGCAAGGCGCGCTCACCAGCATATGGGAACTGACTTTATCAGAGCGGCAAAATGCCTCCGAACTACTAGAAAACACTACCGTCCGTCCATTTGTTTACTGCAGATACTTCTTTAAATGCTTCTTCTGTCGAGAACAATACTCAGACGTCAAAATTCTTCTTCAACACACTCTTACCCATGAAGTACCCGAGAAAACCAAGATCCTGAAAGAATTGCTACCAAAAGGAAAAAGAACAGTCAAAGTAGATATATCAGAATTGAAATGCAGAATATGTCAACAACATTTTAGCGATTTAGATGAAATTCGGAGTCATTTAACTAAGGAACATGATAAAGAATTCACAAAATCTGGGCATGGGTTGATAGCATATAATTTGAAGTCAGTAGACGGACAATTCTCCTGTCATGTTTGCAGTAAAATATTTCAAACTTTCATTCTGTTAAATCGACATATGAACGTTCATTTCAACAACGCCGTATGCGAGACTTGCGGTGCTGGCTTCATGACTCACCAAAGATTATTACAACACAAAGAAATCCACCTACCAGGCGGTTACCCTTGCGACAAGTGTTCCAAAGTTTATACTACTAACTCTAATCTTAAATTTCACAAAGATAAAGCACACGAAGGAATGATGAAAGCACGAATGCTCCGCTGTCCTCACTGTACCGAAAGATTCTCAGAGCATTTTAGAAAATTGAAACATTTAAAAGATGCGCATGGCATAACGTTTACATATGAATGTGATGTGTGTAAGACCGTGTTTCCCAGCAGACGGGCATTGACGATGCACACGAATAAGTTCCATACAGTAAAGACACGGTGTCAGGTGTGCCAAAAGAGTTTTAGCTGTGTCACGACTTTGAAAAAGCACATGATATCACATACTGGGGAGAGGAGTCATGTATGTGGGCTATGCAAGAAGACGTATAGACATAAAAAGAGTTTAAAGCAACATATGCGGGCACATGTAAACGGGGAGCAATGCATTAAATTCTCATGTTCTGATTGCGGTAGTGGCTTTCCTAACAGAAATGATTTTAACAAGCATGTCAAGGAATGGCATCCGAGAAGCTACTTTGAATATACTGTAAATTAA
Protein Sequence: MTIAERQNAATFLEYTTIKPFYYQQGNFKCFYCNEVFPEIHSVLEHSFFHSTPDRSSLLKQHLRKGKRVIKVDISSLQCRICEQKYSDLEDIRKHLNVVHKKEFNSAGNGLMAYNLNLVNGLLYCHKCAKSFNTFFLLNRHMNVHFNVVCEVCGLGFMSHQRLINHRVVHQNGIHVCDKCHEVFSTKLKLRYHLLKKHEVNNAKKMKPLKCPHCLERFSEHYRKMTHLREVHGITFTFECPVCKTVFLTRRALTEHTTKLHTQKIQCKVCGKCFGTKSLLKMHIRGHSGTKTEDRQRQGALTSIWELTLSERQNASELLENTTVRPFVYCRYFFKCFFCREQYSDVKILLQHTLTHEVPEKTKILKELLPKGKRTVKVDISELKCRICQQHFSDLDEIRSHLTKEHDKEFTKSGHGLIAYNLKSVDGQFSCHVCSKIFQTFILLNRHMNVHFNNAVCETCGAGFMTHQRLLQHKEIHLPGGYPCDKCSKVYTTNSNLKFHKDKAHEGMMKARMLRCPHCTERFSEHFRKLKHLKDAHGITFTYECDVCKTVFPSRRALTMHTNKFHTVKTRCQVCQKSFSCVTTLKKHMISHTGERSHVCGLCKKTYRHKKSLKQHMRAHVNGEQCIKFSCSDCGSGFPNRNDFNKHVKEWHPRSYFEYTVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00063863;
90% Identity: -
80% Identity: -