Basic Information

Insect: Mimas tiliae
Gene Symbol: -
Assembly: GCA_905332985.1
Location: HG995253.1:475749-477269[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 4.1e-06 0.00028 21.6 2.7 1 23 140 162 140 163 0.96

2 12 0.00015 0.011 16.6 0.0 2 23 181 202 180 202 0.97

3 12 7.3e-06 0.0005 20.7 2.4 1 23 208 231 208 231 0.98

4 12 0.0049 0.34 11.9 1.8 1 23 238 260 238 260 0.98

5 12 7e-05 0.0049 17.7 1.8 1 23 266 288 266 288 0.96

6 12 3.9e-05 0.0027 18.4 1.7 1 23 294 316 294 316 0.97

7 12 6.2e-06 0.00042 21.0 2.8 1 23 322 344 322 344 0.99

8 12 8.5e-07 5.9e-05 23.7 0.6 3 23 352 373 350 373 0.96

9 12 1.4 96 4.1 0.3 6 23 380 397 378 397 0.73

10 12 0.0024 0.16 12.9 0.7 1 23 403 426 403 426 0.94

11 12 0.00063 0.044 14.6 1.1 1 23 432 456 432 457 0.96

12 12 0.00043 0.029 15.2 4.3 1 23 463 486 463 486 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	4.1e-06	0.00028	21.6	2.7	1	23	140	162	140	163	0.96
2	12	0.00015	0.011	16.6	0.0	2	23	181	202	180	202	0.97
3	12	7.3e-06	0.0005	20.7	2.4	1	23	208	231	208	231	0.98
4	12	0.0049	0.34	11.9	1.8	1	23	238	260	238	260	0.98
5	12	7e-05	0.0049	17.7	1.8	1	23	266	288	266	288	0.96
6	12	3.9e-05	0.0027	18.4	1.7	1	23	294	316	294	316	0.97
7	12	6.2e-06	0.00042	21.0	2.8	1	23	322	344	322	344	0.99
8	12	8.5e-07	5.9e-05	23.7	0.6	3	23	352	373	350	373	0.96
9	12	1.4	96	4.1	0.3	6	23	380	397	378	397	0.73
10	12	0.0024	0.16	12.9	0.7	1	23	403	426	403	426	0.94
11	12	0.00063	0.044	14.6	1.1	1	23	432	456	432	457	0.96
12	12	0.00043	0.029	15.2	4.3	1	23	463	486	463	486	0.96

Sequence Information

Coding Sequence: ATGGATGCGAAAATATGTCGAATATGCCTTCACAACCCTGGCACAATAATGTTGTTTGACCAACAAAACCAATACTGTGATAAATTAATGAAGTGTGTGAAAATAGTGCTTTGCGACGGTGATGGGTTGCCGGACGCCATCTGCGCTGGCTGTGCTCAAGACCTGACCGCAGCCTATGAGTTTGTTGTCAAATGCGAGTCGTCGGACAAGGCGTTAAGGTCTTTATCCATAGAGCTGCAGGCAAAATCGGAAATAGAGATTAAAGAGGAAGAGGTTAAATTGGAAACCGCAGATAATATGTTGGATGAGTCGTATGATGATTGGAATAGTGAATATCCTAAACAGGAAAATAAATATGTTAAATTATCAAATAAAATACTTGATTTAGACAACCAGAAAAAAACATTAAGAAACATATACCCTTGTGACACTTGTGGCTCTATGTTTTCATATAAAAAAGCTTTGAAAAAACATATAAAGACTCATCATGGGCTCAGAAAAGATTATAACAAAAAGCATAGAGTCAGATCTGGTCCTATACAATGTGTAGTTTGTGGTCTCATGGTTAAAAGCAGGTCTGCCATGGAGGCCCACATTAGAACTCACACTGGAGAAAAACCATTTACCTGTGATATTTGTCACATGAAATTTAGTGTTAAGGGATCTCTAAAAAAGCACATTGAAACTCGCCATTCAGATAGGGAGAGAAAGTTTATATGTGAGACATGTGGGAGCAGGTTCTTCAGAAAGTGTGAAATAATAGCTCATGTACGAAGACACACTGATGAGAGACCGTATGCTTGTAACTTGTGTTCAAAGAGATTCCGTCAAATATCATCACTTATAAGGCACAAGTTTTCTCATACTGGGGAGCGTCGGCACTCTTGTGCATTATGTCAAAAATCTTTCTACGATAAGTCTGCTATACAAAAGCACATGTCAGTCCACAGCAATGAGAAAAAATATACTTGTCACCTCTGTAACAAGTCAGTTAAAAGTAAAAGTTCCCTCGTCACTCATTTAAAGATTCATTCAAATGAAAAACAAGTAATTTGTAATGTCTGTGGCATGACATTCACTTTAAAAGGCAACCTACAGACACATATGCGGAGGAAACACTCAGAGAAATCTGGGCAATGTACTGTGTGCATGAAAACATACCCAGATTTGGATGTGCATATGCGCAAACACACAGGAGAACGTCCATATGCATGTAAGAGTTGTGATCAAGCATATGCGACTCAACGTAGTTTGTCATACCATATCATGTTTAAGCATGAGAATGCGGATAAGTTCAAATGTTCGATAGGGGAATGTACGAAGACGTTTCCGACAGGGAAGTTGTTGGAGATGCATTTATTGAAGCACCATACTAACCACACGCCGTATGTGTGCCCGCACTGTTCCAGAGGATTCTTCCGGACTTGTGACCTCACACGCCATTTGAAGGGCAGTCACATGGACACCACGAAGATCAGGTTTAAAATGCAAGACCAAGTGATAATAGATGGAGTTAAATGA
Protein Sequence: MDAKICRICLHNPGTIMLFDQQNQYCDKLMKCVKIVLCDGDGLPDAICAGCAQDLTAAYEFVVKCESSDKALRSLSIELQAKSEIEIKEEEVKLETADNMLDESYDDWNSEYPKQENKYVKLSNKILDLDNQKKTLRNIYPCDTCGSMFSYKKALKKHIKTHHGLRKDYNKKHRVRSGPIQCVVCGLMVKSRSAMEAHIRTHTGEKPFTCDICHMKFSVKGSLKKHIETRHSDRERKFICETCGSRFFRKCEIIAHVRRHTDERPYACNLCSKRFRQISSLIRHKFSHTGERRHSCALCQKSFYDKSAIQKHMSVHSNEKKYTCHLCNKSVKSKSSLVTHLKIHSNEKQVICNVCGMTFTLKGNLQTHMRRKHSEKSGQCTVCMKTYPDLDVHMRKHTGERPYACKSCDQAYATQRSLSYHIMFKHENADKFKCSIGECTKTFPTGKLLEMHLLKHHTNHTPYVCPHCSRGFFRTCDLTRHLKGSHMDTTKIRFKMQDQVIIDGVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00858799;
90% Identity: -
80% Identity: -