Basic Information

Insect: Microvelia longipes
Gene Symbol: RREB1
Assembly: GCA_018340805.1
Location: JACMZG010001863.1:46916451-46921280[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00065 0.08 14.5 0.0 1 23 39 62 39 62 0.98

2 15 0.0043 0.52 12.0 0.1 3 23 70 90 70 90 0.98

3 15 2.2e-07 2.7e-05 25.4 0.8 1 23 96 118 96 118 0.99

4 15 0.0017 0.21 13.2 0.3 1 23 143 166 143 166 0.94

5 15 0.038 4.6 9.0 1.7 2 23 172 194 172 194 0.94

6 15 0.014 1.8 10.3 0.1 1 23 310 332 310 332 0.97

7 15 0.012 1.5 10.5 0.2 2 23 341 362 340 362 0.97

8 15 0.0006 0.073 14.6 3.1 1 23 368 391 368 391 0.97

9 15 0.0089 1.1 11.0 2.1 3 23 612 633 610 633 0.96

10 15 0.00076 0.092 14.3 0.2 3 23 749 769 748 769 0.98

11 15 0.086 10 7.9 6.5 1 23 775 798 775 798 0.97

12 15 0.2 24 6.7 0.5 1 23 813 837 813 837 0.94

13 15 0.099 12 7.7 0.9 1 23 852 875 852 875 0.96

14 15 0.0014 0.17 13.5 0.2 3 23 918 938 916 938 0.96

15 15 0.0039 0.48 12.1 5.6 1 23 944 966 944 966 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00065	0.08	14.5	0.0	1	23	39	62	39	62	0.98
2	15	0.0043	0.52	12.0	0.1	3	23	70	90	70	90	0.98
3	15	2.2e-07	2.7e-05	25.4	0.8	1	23	96	118	96	118	0.99
4	15	0.0017	0.21	13.2	0.3	1	23	143	166	143	166	0.94
5	15	0.038	4.6	9.0	1.7	2	23	172	194	172	194	0.94
6	15	0.014	1.8	10.3	0.1	1	23	310	332	310	332	0.97
7	15	0.012	1.5	10.5	0.2	2	23	341	362	340	362	0.97
8	15	0.0006	0.073	14.6	3.1	1	23	368	391	368	391	0.97
9	15	0.0089	1.1	11.0	2.1	3	23	612	633	610	633	0.96
10	15	0.00076	0.092	14.3	0.2	3	23	749	769	748	769	0.98
11	15	0.086	10	7.9	6.5	1	23	775	798	775	798	0.97
12	15	0.2	24	6.7	0.5	1	23	813	837	813	837	0.94
13	15	0.099	12	7.7	0.9	1	23	852	875	852	875	0.96
14	15	0.0014	0.17	13.5	0.2	3	23	918	938	916	938	0.96
15	15	0.0039	0.48	12.1	5.6	1	23	944	966	944	966	0.98

Sequence Information

Coding Sequence: ATGTGTTGTCCGTTATTCTTTGTTATAGACTTGTCATCTAAGCATATGAGTTCTTTTGAAAAGAGCATTTCCAGTTGTAGCGAGGAGGCAGAAACATCAAGTTCTGAGgAAGGATATAGGTGCCCTGGTTGTGAAGTGATAGCTTCATCGCGGGGTGAGTTAACTGCACATCTGCGATCAGCACACGGTAGTGCAGCAACTGGAGGTTGTAGTCTTTGTGGAAAAGTTCTAGGGTCTCAAGCGTCCCTTGACAGACACCTTCTGGTACACTCAGGAGAGAGGCCCTTTAAGTGTCAAGATTGTGGACTTGCTTTTACCACAAACGGGAACATGAACAGGCACTTGCGATCTCATAGACACCCCAAAAGAAAACTTGAATGCAATAACAATGTAGACGAaacgaaaaagaaaacaaaatcggAACCATACTCATGTCCtaagtgtgaaaaagattttgTTTCTCTGCACGTGTTAGAAAGCCACCTTGAAGAAGCTCATCCTGAGTGGGCAGCTAGATGTCACAGTTGTGGATTAGTTTTTAAATCTTATAGAGTTCTAAATTTACATCGGTTTATGGTGCATTATCAACCAGATACCCCTAGACCCGATCTCTCATTTGTAGAATTTTCAACTGAAAAATTTCCCTTAATTGCCGAAGCCATGACTCGCCCAGCTCCATCCCCTCCTCCTCTAGATTCTCAAAAAGATTTCTTCGAAACATTAGACCTAAAGAAATCTCCCGTTAAGAAAGAATCTCCTGAGATTATTACTAATGGCTCCATTAAAGAGGAACCATTAGAGGACGAAAAAGATATGCACATGGCGAATTCTGTAGAAATAACTCCACCTGATTCAAACTATAAAGAAATGGAAGAAGAGCAAGATTGCATTGCATCAGAATTAAGGAAAATGAAAGCTAAGGGCGAATTCCCATGCAGATTATGTCAAGCTGTATTTCCGAACCTTAGGGCATTGAAAGGTCATAATAGAGTACATCTTGCATGTGGAGGCAGAACACTACAGTGCAATATGTGTCCTTATTTTGACAGTGACAAAGCTGCTGTAATAAGGCATATGAGAACGCACAATGGAGATAGACCCTATGAATGTTCTCTCTGTAATTATGCTTTTACTACTAAAGCTAACTGTGAGCGTCATTTAAGAAATAGGCATGCAGCTTCAAAAGATGTCACAAAGAGGTCAATCCTTTATCATCCTGAACCTGATCAGCCTCTTGAAAAAGACTTTAAAGCTGATGTCAAAAGATCCCTTTTCCCTGTAGATGAAGCCTCAATGCATCAGGATTCAGAAAGCCAAAGTGAAGAAGACGACTCAGATAGAGAAGAAGCTCCTTTAGATTTAAGCATGGATGCTTTAGATCTTCGGAAAAAGAAACCTGAAGAAGAACCTGAAGATTTATCCAAGAAATCTTCTGTTAATAatgttaacaataataataacaacataatCAGAGATCTGACTGTTCCTAAGCTTGATGTTTTCTATCCCAACCCTCACTCAATTGCAGCCTTTACTCCGCCATTCTCTCCTTACTACATGCATAACATGCATATGCCTCCAATGTTTTATCAAGAGAGGGAGTTAGCAGAAATGAAAGAAAGGATTCAGAAAGAGTTGATAAGAGGCCTCAGACTTCAGTCTGGTGGAGCAGTCATTCAAGAACCTGTGAACCAGGCCTCGCCATCACCAGaacctccaccacctcctcctccaccaaaAAAAGTAGAGCCTGCAGTTAAGATGGTTATTAAGAATGGAGTTTTAGTACCAAAGCAAAAGCAAAGAAGATATAGGACTGAGAGACCATTTGGTTGTGAACACTGTTCTGCTAGGTTTACTTTAAGATCTAATATGGAGAGACATGTCAAACAGCAACATCCTCAACTTTGGAGTCAAAGACAAAGAGGTGGGGGTGGTAGTGGTAGAAGAAGTAGATCGGAACCTGGTGATCCTGAAGTTAGAGCAGCTCTTGCTGAAGCCATCAAATCTAAAGAGCCTAAACCTAAAGACTCTGATCTTGCTTCAGTATCAAAACTCTTAGACAATGCTTCAACTCAAACATTCAAACAATTTTTCTCGTCTGAAGATGATCCACCTCATAGCGATGAAGAAGGCCTTGTTGCATCTCATTCTGAAGAAAACTCCGGTTCTGATGAAGCCAAgtcTGAAGAAGGAAGCCAGAAAAAGAAAAGTGCTTACTCTTTGGCACCAAACAGAGTAGCTTGCCCTTACTGCTCTCGTGAATTTCCATGGAGCTCAAGTTTAAGACGTCATGTGCTGACTCATACGGGACAGAAACCATTTAAATGCACTCATTGTCCTCTTCTATTTACTACTAAATCTAACTGTGATAGACATTTATTGAGGAAACACTCTACTGGAGCAAGACCAATTTCTTCAAATCATGAGAAACCATTCAGATGTGAAAGGTGTCCTGGTAGCAAGTTTCCAAGTTTAGAATCTTTACGACGCCATACAGCGACACGCCATGAAGGTGATTCACACGACACTTCAGCATGTTCAGAACAGCCATTTAAGTGTCATCTTTGTGAAGGATCATTTAGAGAACGCCAAGAAGCTCTGGATCATCTTCAGATGTTACATCCCCAGGATTATGCTTCTCTTTTAGCTAAGGGTGCTCTTGATTCATCTTCAGGAGATGAAGAAGTAGATGATCCACATCCCAATGATAACCCTAAATTCCCAGATTATACTAATAGAAAGgtTATGTGTGCATTATGCGTTAGAAGATTCTGGTCAGCTGAAGATTTGAGACGTCATATGAGAACACATACTGGTGAAAGACCTTTTTCATGTGATGTTTGTCAAAGACGTTTTACTCTAAAGCACTCCATGTTAAGGCACAGGAAGAAGCATGATCCATCCTCTCCTCCACCGACGTTACTCGGTGCATCACAACGTGATCACATACCTATGCTTCATGCAGCTGCTCAAACTAACAATAATGGTGAAGAAACTGATCTCATCTGTAGTTTACTAGGACTCAGAGACACATCTTTGATTGATAAAATGATTGAAAGGAAAGACCAAGCGGCTTTACTTCTAGGTATTCATACACAAACTCAAACAGCTAGTCCCTGA
Protein Sequence: MCCPLFFVIDLSSKHMSSFEKSISSCSEEAETSSSEEGYRCPGCEVIASSRGELTAHLRSAHGSAATGGCSLCGKVLGSQASLDRHLLVHSGERPFKCQDCGLAFTTNGNMNRHLRSHRHPKRKLECNNNVDETKKKTKSEPYSCPKCEKDFVSLHVLESHLEEAHPEWAARCHSCGLVFKSYRVLNLHRFMVHYQPDTPRPDLSFVEFSTEKFPLIAEAMTRPAPSPPPLDSQKDFFETLDLKKSPVKKESPEIITNGSIKEEPLEDEKDMHMANSVEITPPDSNYKEMEEEQDCIASELRKMKAKGEFPCRLCQAVFPNLRALKGHNRVHLACGGRTLQCNMCPYFDSDKAAVIRHMRTHNGDRPYECSLCNYAFTTKANCERHLRNRHAASKDVTKRSILYHPEPDQPLEKDFKADVKRSLFPVDEASMHQDSESQSEEDDSDREEAPLDLSMDALDLRKKKPEEEPEDLSKKSSVNNVNNNNNNIIRDLTVPKLDVFYPNPHSIAAFTPPFSPYYMHNMHMPPMFYQERELAEMKERIQKELIRGLRLQSGGAVIQEPVNQASPSPEPPPPPPPPKKVEPAVKMVIKNGVLVPKQKQRRYRTERPFGCEHCSARFTLRSNMERHVKQQHPQLWSQRQRGGGGSGRRSRSEPGDPEVRAALAEAIKSKEPKPKDSDLASVSKLLDNASTQTFKQFFSSEDDPPHSDEEGLVASHSEENSGSDEAKSEEGSQKKKSAYSLAPNRVACPYCSREFPWSSSLRRHVLTHTGQKPFKCTHCPLLFTTKSNCDRHLLRKHSTGARPISSNHEKPFRCERCPGSKFPSLESLRRHTATRHEGDSHDTSACSEQPFKCHLCEGSFRERQEALDHLQMLHPQDYASLLAKGALDSSSGDEEVDDPHPNDNPKFPDYTNRKVMCALCVRRFWSAEDLRRHMRTHTGERPFSCDVCQRRFTLKHSMLRHRKKHDPSSPPPTLLGASQRDHIPMLHAAAQTNNNGEETDLICSLLGLRDTSLIDKMIERKDQAALLLGIHTQTQTASP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00743025;
90% Identity: -
80% Identity: -