Mlon033858.1
Basic Information
- Insect
- Microvelia longipes
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_018340805.1
- Location
- JACMZG010001913.1:39557745-39574977[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.5e-99 3.4e-94 316.6 30.4 1 300 26 326 26 326 0.88 2 2 0.15 5.8e+03 -2.6 0.6 242 260 334 352 327 367 0.35
Sequence Information
- Coding Sequence
- ATGTGCTTTAGCCCCCTTATTACAAACCCCTTATGGCTGAAACTTGTTGCTAATAGTAGTGTTTTACTTTGTAAGGCGGAGGCGAGGCTAGCTGCCAAACGACAGGCTCGGGCTGAAGCCAGGGAGATCCGAATGAGAGAGATAGAGAGACAGCAGAAAGAAAATGACGATTCCTCTATCTATGATACTGCTTCCCCCTATTCATCCACTCCGTCAGACGGAGGAGGGAGTAGGAGCAGTGGAGGTGCAGTCAGACTCAACTCTGTCCCCAGACTTAATAGTTACCAATCTTCTAGAAGATCTAGTGAGGATTCTCTTGAAGAGTCAAATTCACTTAGAGATGTTAGGCACGAGTTACGAGAAGTGGAAGATAAGTTTAGGAAAGCAATGATAGGGAATGCTCAGCTTGATAATGAAAAGACTGCTGCTGCTTACCAAGTTGAATTGTACAAAGATAAATATGAAGAATTAGAGGAATCTTACGCACAGCTACAGaGAGAGCACAGAGAGAAGTGTAGGGAATTAGAACAACTTAGAAGGGATTCTGATAAAATTAGTAAAGAACTATTTTATACCAGGCAAGCTCTTGATGAGAGAGACACTCTTATACAGGAACAAGGTTTGGTGATAGTGGGTGGTGATACAAGTTCATCAGAGTCGTGTGATGAAGATGAAgataataatagtagtaataaacCTCATAGAGAGAAGCATAAGAGAGCTTTGGTTTCGCAAGATAATGCTGCTTTGTTAGACTCAGCTGGCAAGGGATCACTAGaTGTAAGATTGAAAAAATTGGCTGCTGAAAGAAATGACTTGATGGATGAGTTAAGACATGTTAAGTTAGAGTTAGAGGAGGAGAAGGCTAAACTTAGGTCTGCAAGTTCTGCTGATATTGAGGACTTACAGAAAGAAGTAAACAAGCAGATTGGTGACTATAGGTTTAAATTACAGAAAGCAGAACAAGATATAACAACTCTGCAGACCACGGTTACGAGGTTAGAAAGTCAGGTATCAAGGTACAAAACTTCCACTGAAACTCTTGAAAAATCTGAAGAAACTCTGAAAGTAGAACGGAGGAAGTTACTTAGAGAAGTAAGTTGTTACTTTTAG
- Protein Sequence
- MCFSPLITNPLWLKLVANSSVLLCKAEARLAAKRQARAEAREIRMREIERQQKENDDSSIYDTASPYSSTPSDGGGSRSSGGAVRLNSVPRLNSYQSSRRSSEDSLEESNSLRDVRHELREVEDKFRKAMIGNAQLDNEKTAAAYQVELYKDKYEELEESYAQLQREHREKCRELEQLRRDSDKISKELFYTRQALDERDTLIQEQGLVIVGGDTSSSESCDEDEDNNSSNKPHREKHKRALVSQDNAALLDSAGKGSLDVRLKKLAAERNDLMDELRHVKLELEEEKAKLRSASSADIEDLQKEVNKQIGDYRFKLQKAEQDITTLQTTVTRLESQVSRYKTSTETLEKSEETLKVERRKLLREVSCYF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -