Basic Information

Gene Symbol
Bgb
Assembly
GCA_018340805.1
Location
JACMZG010001863.1:33716643-33730912[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.1e-34 5.1e-30 105.4 0.3 93 164 1 72 1 74 0.97

Sequence Information

Coding Sequence
ATGgTTCACATACGATCACATTTTATTATGAATGGTGTTTGTGTGAGGTGGAGAGGATGGATTGATCTAGAAAGATTAGATGGAGTAGGATGCCTCGAGTATGATGAAGATCAAGCCGTTATAGAAGATTCAATGCTTAGAGATCAGATAGAAAGATACAATCAAAGATTAAGAGATTTCGAAGAAAGACAAAAAGCATATAGAGCTCAACAAGACAGGATACCTGATCAAGATTTAGAGTTAAGACTTGGTGGTGGGGCCGGGGGCGGTGGACAGACAGGAAGATGCCAACGTGTACCAACTCTCGTCGGACATAACCCACCCTAG
Protein Sequence
MVHIRSHFIMNGVCVRWRGWIDLERLDGVGCLEYDEDQAVIEDSMLRDQIERYNQRLRDFEERQKAYRAQQDRIPDQDLELRLGGGAGGGGQTGRCQRVPTLVGHNPP*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00742539;
90% Identity
iTF_00742539;
80% Identity
-