Basic Information

Insect: Micropterix facetella
Gene Symbol: -
Assembly: GCA_027564375.1
Location: JAOPUG010000125.1:2329344-2340086[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0006 0.039 15.4 3.3 2 23 138 159 137 159 0.97

2 8 0.047 3 9.5 4.6 1 23 163 185 163 185 0.97

3 8 0.00014 0.0088 17.5 2.1 1 23 190 212 190 212 0.94

4 8 0.0057 0.37 12.4 3.1 3 23 220 241 218 241 0.91

5 8 1.1e-05 0.00074 20.8 1.9 1 23 248 271 248 271 0.97

6 8 0.00078 0.05 15.1 1.7 1 23 277 299 277 299 0.91

7 8 0.00047 0.031 15.7 1.7 1 23 305 327 305 327 0.95

8 8 7.2e-06 0.00047 21.5 3.3 1 23 333 355 333 355 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0006	0.039	15.4	3.3	2	23	138	159	137	159	0.97
2	8	0.047	3	9.5	4.6	1	23	163	185	163	185	0.97
3	8	0.00014	0.0088	17.5	2.1	1	23	190	212	190	212	0.94
4	8	0.0057	0.37	12.4	3.1	3	23	220	241	218	241	0.91
5	8	1.1e-05	0.00074	20.8	1.9	1	23	248	271	248	271	0.97
6	8	0.00078	0.05	15.1	1.7	1	23	277	299	277	299	0.91
7	8	0.00047	0.031	15.7	1.7	1	23	305	327	305	327	0.95
8	8	7.2e-06	0.00047	21.5	3.3	1	23	333	355	333	355	0.97

Sequence Information

Coding Sequence: ATGGAGAGAGCCAAGTGCCTGCTCATTGAATCTATAGAGGACAGAGACAACATCCTGTACTTGGTCTGTGACGATTGTAGTTCACGTCTACGCGAGTCATATACTTTCAAATGCCAGATAGTGGACGCACAGAAATCCTTCCAATCCATAGTAAAAATAGAAGCGGGCGACACTGTGGTGATGAAAGAAGAGAGCGAAGATTACTTTCACGAATTCTCCGATGCGGGACGAGACAGCACTGATGCCGAAGACGATACACCGCTGGCGATGGTCACGAAGAACAAATTGCAAAAACAGAAAAAAATTAAAAGAAAAAAGAGAAAGGGAAAGAGCCCTCGCAAAGTCAGCTTGGCTAAGTCAAACGCTCAGATGGATCGCGAAGTACAAGATAGCCTTGACCAGGAAAATTTGCAGTGTAGGATATGTCACGAGACGTTTCACAATTCTTATCTGTTAAGAATGCATGTGAACATTCACTATCCAAACCACATATGTGAAATTTGCGGCAAAGGTCATGCGACGCACAACCGGCTGCGCAACCACCAGCGCATGCACATAACCGGTAGCTTCACCTGCGCAGACTGCGGTAAAGTATTCACGTCAAAAGGCAAATTTGACAATCACCGCGGGCACCATTTGATGCCGCTGCGCCACCTCTGCCCCAAGTGCCCCGAGCGTTTCTCCTCGCACTACCAACGCCAGAAACACCTCGCCGAAACGCACGACGAAATCCTGAAACGCTACACGTGCGACCAGTGCCCCAAAGACTTCACCACCTCCGGCTCTTTATTcaatcacaagaagcgcaatcacttgaagctgaagacgcatgtatgcatccagtgcgagaaggccttctaccacaagtctgagttaaacgatcacatggtggtgcacacgcgcgagcgcaagtttctatgcacggtgtgcttgaagacgtatccgcgcgcttgtacactgcgcgagcatatgaagatacacaataacgtaaagaatcatgtgtgctcggagtgcgggcgtgcgttcacgcagaagtgcacgctgcgcgggcacatgaaagtgcacgagaagaTTACTAAAATCGCATTGAATCTGCCCGATGAATCGTGA
Protein Sequence: MERAKCLLIESIEDRDNILYLVCDDCSSRLRESYTFKCQIVDAQKSFQSIVKIEAGDTVVMKEESEDYFHEFSDAGRDSTDAEDDTPLAMVTKNKLQKQKKIKRKKRKGKSPRKVSLAKSNAQMDREVQDSLDQENLQCRICHETFHNSYLLRMHVNIHYPNHICEICGKGHATHNRLRNHQRMHITGSFTCADCGKVFTSKGKFDNHRGHHLMPLRHLCPKCPERFSSHYQRQKHLAETHDEILKRYTCDQCPKDFTTSGSLFNHKKRNHLKLKTHVCIQCEKAFYHKSELNDHMVVHTRERKFLCTVCLKTYPRACTLREHMKIHNNVKNHVCSECGRAFTQKCTLRGHMKVHEKITKIALNLPDES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01007930;
90% Identity: iTF_01007930;
80% Identity: -