Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010000260.1:77067-87301[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00075 0.045 15.3 3.3 2 23 157 178 156 178 0.97

2 8 0.059 3.6 9.4 4.6 1 23 182 204 182 204 0.97

3 8 0.00042 0.025 16.1 2.3 1 23 209 231 209 231 0.94

4 8 0.0091 0.55 11.9 3.7 3 23 239 260 237 260 0.91

5 8 3.5e-05 0.0021 19.5 2.1 1 23 267 290 267 290 0.97

6 8 4.8e-05 0.0029 19.1 1.7 1 23 296 318 296 318 0.96

7 8 0.0013 0.078 14.6 1.0 1 23 324 346 324 346 0.95

8 8 9.1e-06 0.00055 21.4 3.3 1 23 352 374 352 374 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00075	0.045	15.3	3.3	2	23	157	178	156	178	0.97
2	8	0.059	3.6	9.4	4.6	1	23	182	204	182	204	0.97
3	8	0.00042	0.025	16.1	2.3	1	23	209	231	209	231	0.94
4	8	0.0091	0.55	11.9	3.7	3	23	239	260	237	260	0.91
5	8	3.5e-05	0.0021	19.5	2.1	1	23	267	290	267	290	0.97
6	8	4.8e-05	0.0029	19.1	1.7	1	23	296	318	296	318	0.96
7	8	0.0013	0.078	14.6	1.0	1	23	324	346	324	346	0.95
8	8	9.1e-06	0.00055	21.4	3.3	1	23	352	374	352	374	0.97

Sequence Information

Coding Sequence: ATGCGGAGCATAATAAATCACCAATTGCAGTTCACTAAACTGCACTTGAGCGGAGCGTCGCAGCGCTGCGCTGCGCGTCGCGTCAAGCTCGTTGAATCTGTAGAGGACAGAGATAACATGCTGTACTTGGTCTGTGACGATTGCAGCTCACGTCTACGAGAGTCATATACTTTTAAGTGCCAGATAGTGGACGCACAAAAATCCTTCCAATCCCTAGTAAAAATAGAAGTGGGCGACGCTGTGGCGATGAAAGAAGAGAACGAAGATTATTTTCACGACTTCTCCGATGCGGGACGGGACACCACAGAAGACGACACACCGCTGGCGATGGTCACCAAGCACAAATCGCAAAAACCGAAAAagacgaaaagaaaaaagagaAAGGGAAAGAAAATCAAAGTCAGCTTGACCAAGTCAAACGCTCAGATGGATCGCGAAGTACAAGATAGCCTCGACCAGGAAAATTTGCAGTGTAGGATATGCCATGAAaCGTTCCACAATTCATATTTGTTAAGAATGCACGTGAACATTCACTATCCAAACCACATTTGCGAAATTTGCGGCAAAGGTCATGCGACGCACAACCGGCTGCGCAACCACCAGCGCATGCACATAACCGGCACATTCACCTGCGCGGACTGCGACAAGGTGTTCACGTCCAAGGGCAAGTTTGACAATCACCGCGGACACCACTTGATGCCCCTGCGCCACCTCTGCCCCAAGTGCCCCGAGCGCTTCTCCTCGCACTACCAGCGCCAGAAACACCTGGCCCAAACGCACGACCAAATCCTCAAACGCTACACCTGCGACCGGTGCCCCAAAGACTTCACCACCTCCGGATCTCTGTTCAATCACAAGAAGCGCAATCATTTAAAGCTGAAGACGCACGTCTGCGTCCAGTGCGAGAAGGCCTTCTACCACAAGTCCGAGTTGAACGATCACATGGTGGTGCACACGCGCGAGCGCAAGTTTCTGTGCGCGGTGTGCCTGAAGACGTATCCGCGCGCTTGCACGCTGCGCGAACACATGAAGATACACAATAACGTGAAGAATCACGTGTGCTCCGAGTGCGGGCGCGCATTCACGCAGAAGTGCACGCTGCGCGGTCACATGAAAGTGCACGAGAAGATAACTAAAATTGCGATGAATCTGCCCGATGAGTCGTGA
Protein Sequence: MRSIINHQLQFTKLHLSGASQRCAARRVKLVESVEDRDNMLYLVCDDCSSRLRESYTFKCQIVDAQKSFQSLVKIEVGDAVAMKEENEDYFHDFSDAGRDTTEDDTPLAMVTKHKSQKPKKTKRKKRKGKKIKVSLTKSNAQMDREVQDSLDQENLQCRICHETFHNSYLLRMHVNIHYPNHICEICGKGHATHNRLRNHQRMHITGTFTCADCDKVFTSKGKFDNHRGHHLMPLRHLCPKCPERFSSHYQRQKHLAQTHDQILKRYTCDRCPKDFTTSGSLFNHKKRNHLKLKTHVCVQCEKAFYHKSELNDHMVVHTRERKFLCAVCLKTYPRACTLREHMKIHNNVKNHVCSECGRAFTQKCTLRGHMKVHEKITKIAMNLPDES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01008941;
90% Identity: iTF_01008941;
80% Identity: -