Basic Information

Insect: Micropterix facetella
Gene Symbol: -
Assembly: GCA_027564375.1
Location: JAOPUG010000125.1:6790590-6817290[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.026 1.7 10.3 4.1 2 23 208 229 207 229 0.96

2 14 0.0027 0.17 13.4 2.2 1 23 233 255 233 255 0.99

3 14 0.00085 0.055 15.0 0.5 1 23 260 282 260 282 0.98

4 14 0.26 17 7.1 6.0 3 23 289 310 287 310 0.94

5 14 0.14 9.2 8.0 0.6 1 23 316 339 316 339 0.98

6 14 0.0009 0.058 14.9 0.5 1 23 346 368 346 368 0.97

7 14 4.9e-06 0.00032 22.0 1.0 1 23 374 396 374 396 0.97

8 14 8.6e-06 0.00056 21.2 1.2 1 23 402 424 402 424 0.99

9 14 4.8e-05 0.0031 18.9 2.3 2 23 450 471 449 471 0.97

10 14 4e-05 0.0026 19.1 1.0 1 23 475 497 475 497 0.98

11 14 0.0087 0.56 11.8 1.1 1 23 502 524 502 524 0.95

12 14 0.039 2.5 9.7 0.9 3 23 531 552 530 552 0.92

13 14 0.0038 0.25 12.9 1.7 1 23 558 581 558 581 0.95

14 14 4.7e-05 0.003 18.9 0.6 3 23 590 610 588 610 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.026	1.7	10.3	4.1	2	23	208	229	207	229	0.96
2	14	0.0027	0.17	13.4	2.2	1	23	233	255	233	255	0.99
3	14	0.00085	0.055	15.0	0.5	1	23	260	282	260	282	0.98
4	14	0.26	17	7.1	6.0	3	23	289	310	287	310	0.94
5	14	0.14	9.2	8.0	0.6	1	23	316	339	316	339	0.98
6	14	0.0009	0.058	14.9	0.5	1	23	346	368	346	368	0.97
7	14	4.9e-06	0.00032	22.0	1.0	1	23	374	396	374	396	0.97
8	14	8.6e-06	0.00056	21.2	1.2	1	23	402	424	402	424	0.99
9	14	4.8e-05	0.0031	18.9	2.3	2	23	450	471	449	471	0.97
10	14	4e-05	0.0026	19.1	1.0	1	23	475	497	475	497	0.98
11	14	0.0087	0.56	11.8	1.1	1	23	502	524	502	524	0.95
12	14	0.039	2.5	9.7	0.9	3	23	531	552	530	552	0.92
13	14	0.0038	0.25	12.9	1.7	1	23	558	581	558	581	0.95
14	14	4.7e-05	0.003	18.9	0.6	3	23	590	610	588	610	0.97

Sequence Information

Coding Sequence: ATGTCCGATGTCACGGAGGGGTGTAAACGAGGAACGGAGCCGTCGATAAAGTATAGCGAGTTCAGCGACGAGGAGGTTTGTAGCTGCTGCTTAACCGGCGGAAAATTGCTAAATATGCACAAAACTTTTGATAACAACGGAGATATTGAGAGTTACATTGAGGCCATCAACCGCTGCTACAACTCCCAGATCCTAGATCCTCTGGAGCCGGCTGAACGGCACCACATTTGCGAGGAGTGCATCACCAGGCTGATAGAGTCCTTCAATTTTAAGCGACAGATAACCGAAGCTCAGAAGTCGCTGCATGACTATTTTGATGATCAAGTTAGTCCCTGGGAAGATGAAAAGGACGATCCTTCGAAATTTGACGCTTATCTCCTTTTAGACTGCGATGACATCAAACCGGATGATGAAGACGGTGAAATGGACCACAACTATGATGATGATATAGGAAATCGAACCCAAAGGCGAAAGCCCGTACAGCGGAAGCCGAGAGATCCGAACAAACCTTACAACAAACCCGGACCTCGACCTAAAAAGGAGCAAGTCGTTAAGCCTCGCAAGGTGTACATAAACCGCGAAGACGCAAAGGTGATGGAGGCCATGGACAAAGAGAACATACAGTGCAGGGTGTGTCTGAAGAAGTACCGCAGCGTACACCACCTCAGCCAGCATATGAACGACCACTTTGTCAACTACACATGCGACATTTGCGGCAAGGGCCACGCCACATCCACGCGCTTCATGAACCACATGCGGCGCCATGCCACCGGCGACTTCAAGTGCAGCGTCTGCGGCCTGACGTTCGATACTGTCAGCCGCCTCGACAACCACAGAGCCAAACATCGCTCCGGGAAACACTTATGCCACACATGCAACCGCCGCTTCCTATCATTCTACTCCTTAAAGAAACATCTCATAAAAGAGCACGACGAACAAGCGAATTACCCTTGCAAACTCTGCAGCGTCGTCTGCTTAACATCCGGTTTGTTGGTCTCGCACGTCAGAACGAAGCACACAGTGCGTGAGCGATCCTTTGCATGCGAATTCTGCGATAAAGAATTCTTCGAGAAGCGTGCCGTCAAGAAACACATGATCATTCACACTGGGCAAAGAAGCCATGTTTGCACCGAGTGCAACAAAGCGTACATTCGCAAAGAAACCCTCGCTCAACACATGAAAGTACACCGAAATATAAGGGACTACGTATGCTCTCTGTGCGGCCAGGCTTTCGTTCAAAAATGCTCACTCGACTGGCATATGAGAAAGCACGGCTTTGGCTCTGGTAAAGTAATTCTAAAATACCGTGACGCCGAGAAGTACAAAGCGATGGACAAGGAGAATATCCAGTGTAAAGTGTGTCAAGTGAAATTCCGCAACCTGCACAATCTGACGCAACACATGAACGAGCATTTCATCAATTACACGTGCGAGAAGTGCGGCAAGGGATTTGCGACGAAGAAGAGCTACTCGGGCCACGCAAGGCGCCACCTCGTCGGCGAGTTCACGTGCAACGTCTGCAACAAGGCCTTCGATACGATAAGCAAGCGGGACAATCACAGAGCGAAGCACAGGCCGGGGCTGCGGCTTTGCCGGCGCTGCCCGAAGCAGTTTGGCTCTTTCTACACGCTACAAAAGCACCTAGTGAACGATCACGGAGAGGGCAAGGGGTACAACTGCGAGATGTGCGATGTCGTCTGCTACACCGCCAGTTCGCTGGTCACTCACATTCACAACAACCACACCATACGCGAGAGGAAATACGGATGCGAATACTGCGACAAAGAATTCTTCAGCAAATTTAATTTGAAAAGCCATTTGGCTGTACACAGAGTAACCAAACAGGAACATCCACATATGGAATGA
Protein Sequence: MSDVTEGCKRGTEPSIKYSEFSDEEVCSCCLTGGKLLNMHKTFDNNGDIESYIEAINRCYNSQILDPLEPAERHHICEECITRLIESFNFKRQITEAQKSLHDYFDDQVSPWEDEKDDPSKFDAYLLLDCDDIKPDDEDGEMDHNYDDDIGNRTQRRKPVQRKPRDPNKPYNKPGPRPKKEQVVKPRKVYINREDAKVMEAMDKENIQCRVCLKKYRSVHHLSQHMNDHFVNYTCDICGKGHATSTRFMNHMRRHATGDFKCSVCGLTFDTVSRLDNHRAKHRSGKHLCHTCNRRFLSFYSLKKHLIKEHDEQANYPCKLCSVVCLTSGLLVSHVRTKHTVRERSFACEFCDKEFFEKRAVKKHMIIHTGQRSHVCTECNKAYIRKETLAQHMKVHRNIRDYVCSLCGQAFVQKCSLDWHMRKHGFGSGKVILKYRDAEKYKAMDKENIQCKVCQVKFRNLHNLTQHMNEHFINYTCEKCGKGFATKKSYSGHARRHLVGEFTCNVCNKAFDTISKRDNHRAKHRPGLRLCRRCPKQFGSFYTLQKHLVNDHGEGKGYNCEMCDVVCYTASSLVTHIHNNHTIRERKYGCEYCDKEFFSKFNLKSHLAVHRVTKQEHPHME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01007685;
90% Identity: -
80% Identity: -