Basic Information

Insect: Micropterix aruncella
Gene Symbol: -
Assembly: GCA_944547385.1
Location: CALYMV010003290.1:126888-154567[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.034 2.1 10.1 4.1 2 23 261 282 260 282 0.96

2 14 0.0035 0.21 13.2 2.2 1 23 286 308 286 308 0.99

3 14 0.0011 0.067 14.8 0.5 1 23 313 335 313 335 0.98

4 14 0.34 21 7.0 6.0 3 23 342 363 340 363 0.94

5 14 0.18 11 7.8 0.6 1 23 369 392 369 392 0.98

6 14 0.00054 0.033 15.8 0.5 1 23 399 421 399 421 0.97

7 14 6.4e-06 0.00039 21.9 1.0 1 23 427 449 427 449 0.97

8 14 1.1e-05 0.00068 21.1 1.2 1 23 455 477 455 477 0.99

9 14 4.5e-05 0.0027 19.2 2.8 2 23 503 524 502 524 0.97

10 14 5.1e-05 0.0031 19.0 1.0 1 23 528 550 528 550 0.98

11 14 0.0079 0.48 12.1 1.3 1 23 555 577 555 577 0.96

12 14 0.05 3 9.6 0.9 3 23 584 605 583 605 0.92

13 14 0.005 0.3 12.8 1.7 1 23 611 634 611 634 0.95

14 14 1.6e-05 0.00098 20.6 0.7 3 23 643 663 641 663 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.034	2.1	10.1	4.1	2	23	261	282	260	282	0.96
2	14	0.0035	0.21	13.2	2.2	1	23	286	308	286	308	0.99
3	14	0.0011	0.067	14.8	0.5	1	23	313	335	313	335	0.98
4	14	0.34	21	7.0	6.0	3	23	342	363	340	363	0.94
5	14	0.18	11	7.8	0.6	1	23	369	392	369	392	0.98
6	14	0.00054	0.033	15.8	0.5	1	23	399	421	399	421	0.97
7	14	6.4e-06	0.00039	21.9	1.0	1	23	427	449	427	449	0.97
8	14	1.1e-05	0.00068	21.1	1.2	1	23	455	477	455	477	0.99
9	14	4.5e-05	0.0027	19.2	2.8	2	23	503	524	502	524	0.97
10	14	5.1e-05	0.0031	19.0	1.0	1	23	528	550	528	550	0.98
11	14	0.0079	0.48	12.1	1.3	1	23	555	577	555	577	0.96
12	14	0.05	3	9.6	0.9	3	23	584	605	583	605	0.92
13	14	0.005	0.3	12.8	1.7	1	23	611	634	611	634	0.95
14	14	1.6e-05	0.00098	20.6	0.7	3	23	643	663	641	663	0.97

Sequence Information

Coding Sequence: ATGGAGGGATGTAAGCGTGGAACGGAACCGTCGATAAAGTATAGCGAGTTCAGCGACGAGGAAGTTTGCAGCTGCTGTTTAACCGGCGGAAAATTGCTGAATATGCACAAAACTTTCGATAACAATGGAGATATCGAGAGCTACATTGAGGCCATCAACCGCTGCTACAACTCCCAAATCCTGGATCCTCTGGAGCCGGCGGAACGGCACCACATTTGCGAGGAGTGCATCACCCGGCTTACGGAGTCCTTTAATTTTAAGCGCCAGATCACCGAAGCACAGAAGTCGCTGCATGACTATTTTGATGATCAagTTAGTCCCTGGGAAGATGAAAAAGACGATCCTTCAAAATTCGACGCTTACCTCCTTTTGAACTGCGATGACATCAAACCGGATGATGAAGACGCTGAAATTGAACATAACTACGATGATGATATAGggCTCTTGGATTATGCCGCTGATCAACAATCTGACGAAGATTCCACACCATTAGCGCAGCTGGGAGCCTACGGTTCAAATTCCGTCAAAGTGGAGGATGAAGATATCAATCCGGAAATCGCCTCGAGAAAGATGAAAACGAGAGGCAACCACTACAAAAACAGATCTATGAgaaatcgACCCCAAAGGCGAAAGCCCGCACAGCGAAAGCCGAGAGACCCGAACAAACCTTACAACAAACCCGGACCTCGACCTAAAAAGGAGCAAGTCGTTAAACCTCGCAAGGTGTACATAAACCGCGAAGACGCAAAGGTGATGGAGGCCATGGACAAAGAGAACATACAGTGCAGGGTGTGTCTGAAGAAGTACCGCAGCGTGCACCACCTCAGCCAGCACATGAACGACCACTTTGTCAACTACACGTGCGACATCTGCGGCAAGGGCCACGCTACGTCCACGCGATTCATGAACCACATGCGGCGCCACGCCACCGGCCACTTCAAATGCAGCGTCTGCGGCTTGACCTTCGATACGGTCAGCCGCCTCGACAATCATCGAGCGAAACACCGCTCCGGCAAACACTTATGCCATACTTGCAACCGCCGCTTCTTATCATTCTACTCCCTAAAGAAACATCTCATAAAAGAGCACGACGAGCAGGCGAACTACCCTTGCAAACTATGCAGCGTCGTCTGCTTAACGTCCGGCTTGTTAGTCTCGCACGTTCGAACGAAGCACACGGTGCGCGAGCGATCGTTCGCGTGCGAGTTCTGCGACAAGGAATTCTACGAGAAGCGCGCCGTCAAGAAACACATGATCATCCACACTGGACAGCGGAACCACGTTTGCACCGAGTGCAATAAGGCGTACATTCGCAAAGAGACCCTCGCTCAGCACATGAAAGTACACCGGAACATAAGGGACTACGTGTGCTCTCTATGCGGACAGGCTTTCGTTCAGAAATGCTCGCTCGACTGGCATATGAGGAAGCACGGCTTTGGCTCTGGTAAAGTGATCCTAAAATACCGCGACGCCGAGAAGTACAAAGCGATGGACAAGGAGAACATCCAGTGCAAAGTGTGCCAGATGAAATTCCGCAACCTGCACAATTTGACGCAACACATGAACGAGCACTTCATCAATTACACTTGTGAGAAGTGCGGCAAGGGCTTTGCGACGAAGAAGAGTTACTCGGGCCACGCGCGGCGCCACCTTGTCGGCGACTTCAAGTGCAACGTCTGCAACAAGGCCTTCGACACGATAAGCAAGCGCGACAACCACAGGGCCAAGCACAGGCCGGGCCTGCGGCTCTGCCGGCGCTGCCCCAAGCAGTTTGGCTCTTTCTACACGCTGCAGAAACATCTGGTGAACGACCACGGGGAGGGCAAAGGGTACAACTGCGAGATGTGCGATGTCGTCTGCTACACGGCCAGCTCGCTGGTCACTCACATCCACAACAACCACACCGTACGCGAGAGGAAATACGGATGCGAATACTGCGACAAAGAATTCTTCAGCAAATTCAATCTGAAAAGCCACATGGCGGTACACAGAGTCGCCAAACAGGAACATCAACATATGGaatga
Protein Sequence: MEGCKRGTEPSIKYSEFSDEEVCSCCLTGGKLLNMHKTFDNNGDIESYIEAINRCYNSQILDPLEPAERHHICEECITRLTESFNFKRQITEAQKSLHDYFDDQVSPWEDEKDDPSKFDAYLLLNCDDIKPDDEDAEIEHNYDDDIGLLDYAADQQSDEDSTPLAQLGAYGSNSVKVEDEDINPEIASRKMKTRGNHYKNRSMRNRPQRRKPAQRKPRDPNKPYNKPGPRPKKEQVVKPRKVYINREDAKVMEAMDKENIQCRVCLKKYRSVHHLSQHMNDHFVNYTCDICGKGHATSTRFMNHMRRHATGHFKCSVCGLTFDTVSRLDNHRAKHRSGKHLCHTCNRRFLSFYSLKKHLIKEHDEQANYPCKLCSVVCLTSGLLVSHVRTKHTVRERSFACEFCDKEFYEKRAVKKHMIIHTGQRNHVCTECNKAYIRKETLAQHMKVHRNIRDYVCSLCGQAFVQKCSLDWHMRKHGFGSGKVILKYRDAEKYKAMDKENIQCKVCQMKFRNLHNLTQHMNEHFINYTCEKCGKGFATKKSYSGHARRHLVGDFKCNVCNKAFDTISKRDNHRAKHRPGLRLCRRCPKQFGSFYTLQKHLVNDHGEGKGYNCEMCDVVCYTASSLVTHIHNNHTVRERKYGCEYCDKEFFSKFNLKSHMAVHRVAKQEHQHME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01008775;
90% Identity: -
80% Identity: -