Mfac039624.1
Basic Information
- Insect
- Micropterix facetella
- Gene Symbol
- -
- Assembly
- GCA_027564375.1
- Location
- JAOPUG010000007.1:7072108-7091128[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.5e-11 7.3e-08 33.0 0.0 4 39 188 224 185 228 0.90 2 4 2.5e-11 2.8e-08 34.4 0.1 2 39 240 277 239 280 0.92 3 4 9.5e-16 1.1e-12 48.5 0.0 1 45 294 339 294 339 0.97 4 4 1.6e-17 1.8e-14 54.2 0.0 1 38 346 384 346 389 0.93
Sequence Information
- Coding Sequence
- ATGCATATAGGCGGCGAACCGTTGGCTTTGTCTGGGTGCGAGCTGAAATTCACTTTCGTTCGCGACATCATATCCTTCCTCGAAGGTCACCACCCTTCCATCGCGATTCGCTTTCACTTGACCATTACCGAAATGAACATGATTTCAAATGAGACAGACTATTCTTTACCGGTGCCCTTACCTCCATCAGCGACTCCGGTCGAGGTCATGGCTTCGGCGGAAGACGGGAATTATTTGCACAATATTTCTACAGTTAGCGAATTAACAACCGGGGTCAAAGTTAAATTGGAAAATCTGGAAACGGACGATCAGGAAACGTTGGATATGGACACACATATGAGCCTGCATCCAATCAAGATTGAAGTTGGCGTATCGTCGGGGATGAACAGGGATTTCATGAATTTGCTGCCAGGGGAAAATGGCTCAAGTTTTGGAGAAGATATCCACCACAGTGGTGATGACACGAATGACTCTACAAATAATGCTATAAACGGGGAAAGCTTGCAAAAAGGCATGTATTTGCAGTCGGGAATAAATGGACCGAAAACGTGGTCGCAGCATGATATGGATAACGCACTGGATGCTCTACGAAATCACAATATGAGTTTGACGAAAGCATCGGCGACATATGGCATCCCATCGACGACACTATGGCAACGTGCCCATAGACTAGGCATAGACACTCCAAAAAAGGAAGGCCCGTCAAAATCGTGGAGCGAGAATAATTTACACAATGCATTACAAGCACTCAGAACTGGAACAATATCTGCCAATAAAGCCAGTAAGGCCTACGGAATCCCGAGCAGCACATTATACAAAATAGCGAGACGCGAAGGTATTCGACTGGCAGCACCGTTCAACGCTGCTCCGACCACTTGGAGACCGGATGACCTAGAACGGGCGCTGGAGTCCATACGATCCGGTCTGTCATCGGTGCAGAGGGCGTCGACAGAATTTGGAATACCTACAGGTACACTTTATGGACGGTGTAAAAGAGAAGGCATAGAGTTATCGAGATCAAATCCAACACCTTGGTCCGAAGATGCAATGAATGAAGCGCTAGATGCAGTCCGGGTTGGCCAAATGTCGATAAACCAAGCGGCCATACACTACAATTTACCGTATTCTTCGCTGTACGGTCGGATTAAACGATGCAAATTTGAGATAGAGGGCACTGCTGCAGCGAGCGATGGCGCAATAGTTCCATCGCAAAGTACGATTGGCGATTCGATGGTACCCGCACTGATCGCAGATCCCGCTCAACATTCCGCACACATACCTCATAATATGCATATGTCGCACCCTCAACACAATATGATACCTCAAGAGCTGCATTACCCTACAATGGAGCCGCTCCTCGACGCGCAGGGTACTCAAGATGATTATTCCAGAAGGTTCTATTCTGTCTACCATCATTCTCTAACAGTTCCTAGCGACGATCACACCGATGCTTCCCACCTAACCACTTCCAATCATGACTGTATATCAACCAGCTGA
- Protein Sequence
- MHIGGEPLALSGCELKFTFVRDIISFLEGHHPSIAIRFHLTITEMNMISNETDYSLPVPLPPSATPVEVMASAEDGNYLHNISTVSELTTGVKVKLENLETDDQETLDMDTHMSLHPIKIEVGVSSGMNRDFMNLLPGENGSSFGEDIHHSGDDTNDSTNNAINGESLQKGMYLQSGINGPKTWSQHDMDNALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKSWSENNLHNALQALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWRPDDLERALESIRSGLSSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALDAVRVGQMSINQAAIHYNLPYSSLYGRIKRCKFEIEGTAAASDGAIVPSQSTIGDSMVPALIADPAQHSAHIPHNMHMSHPQHNMIPQELHYPTMEPLLDAQGTQDDYSRRFYSVYHHSLTVPSDDHTDASHLTTSNHDCISTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006919;
- 90% Identity
- iTF_01006919;
- 80% Identity
- -