Maru012274.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- -
- Assembly
- GCA_944547385.1
- Location
- CALYMV010001921.1:3530-21986[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.9e-10 7.1e-08 33.2 0.0 4 39 181 217 178 221 0.90 2 4 2.9e-10 3e-08 34.4 0.1 2 39 233 270 232 273 0.92 3 4 1.1e-14 1.2e-12 48.5 0.0 1 45 287 332 287 332 0.97 4 4 5.2e-16 5.4e-14 52.8 0.0 1 38 339 377 339 382 0.93
Sequence Information
- Coding Sequence
- ATGACCGGTAATTCTGATGTTTCGCCAAATCAAAATTTTGAAGATGAGTACCGAGAGGCGACTACAAATTGCAGCATAATGAGGCATTTACAGACCGCCACCGTCACCGATATGAACATGATTTCGAATGAGACAGACTATTCTTTACCGGTGCCCCTACCTCCATCAGCGACTCCGGTCGAGGTCATGGCTTCGGCGGAAGATGGCCATTATTTGCACAATATTTCTACAGTTAGCGAATTAACGACCGGGGTCaaagtcaaatttgaaaatctgGAAACGGACGATCAGGAAACGTTGGATATGGACACGCATATGAGCCTGCATCCGATCAAGATGGAAGACGGTGTGTCGTCGGGTATGAACAGGGATTTTGTGAATCTGCTAACAGGGGAAAATGGCACGAACTTCGGAGAAGATATTCACCACAGTGGTGACGACACGAATGACTCTACAAATAATGCTATGAACGGGGAAGGCTTGCAAAAAGGCATGTATTTGCAGTCGGGAATAAATGGACCAAAAACGTGGTCGCAGCAAGATATGGACAACGCATTGGATGCTCTACGAAATCACAATATGAGTCTGACAAAAGCATCAGCGACATATGGCATCCCATCGACGACACTATGGCAACGCGCCCATAGACTAGGCATAGACACTCCAAAAAAGGAAGGCCCGTCCAAATCGTGGAGCGAGAATAATTTACACAACGCATTACAAGCGCTCAGAACTGGAACAATATCTGCCAATAAAGCCAGTAAGGCCTACGGAATCCCGAGCAGCACCTTATACAAAATAGCGAGACGCGAAGGCATTCGGCTGGCAGCACCGTTCAACGCTGCTCCGACCACTTGGAGACCGGATGACCTGGAACGGGCGCTGGAGTCCATACGATCCGGTCTGTCGTCGGTGCAGAGGGCGTCGACGGAATTTGGAATACCCACAGGTACACTTTATGGACGATGTAAAAGAGAAGGGATAGAGTTATCGAGATCAAATCCAACACCTTGGTCCGAAGATGCAATGAATGAAGCATTGGACGCAGTCCGAGTCGGCCAAATGTCGATAAACCAAGCGGCCATCCATTTCAACTTACCGTATTCTTCGCTGTACGGTCGGATCAAACGTTGCAAATTCGAGATAGAGGGCACTGCTGCAGCGGGCGATGGCGCCATAGTTCCATCGCAGAATCCGACAGGCGATCCGATGGTTCCAGCACTGATCGCAGACCCCGCTCAACATTCTGCACACATACCTCATAATATGCATATGTCGCACCCTCAACACAATATGTTACCTCAAGAGCTGCATTACCCTACGATGGAGCCGCACCTTGACGCGCAGGGTACTCAAGACGATTATTCCAGAAGGTTCTATTCTGTCTACCATCATTCTCTGACAGTTCCTAGCGACGATCACACTGATGCTTCCCACCTAACCACTTCCAATCACGACTGTATATCAACCAGCTGA
- Protein Sequence
- MTGNSDVSPNQNFEDEYREATTNCSIMRHLQTATVTDMNMISNETDYSLPVPLPPSATPVEVMASAEDGHYLHNISTVSELTTGVKVKFENLETDDQETLDMDTHMSLHPIKMEDGVSSGMNRDFVNLLTGENGTNFGEDIHHSGDDTNDSTNNAMNGEGLQKGMYLQSGINGPKTWSQQDMDNALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPSKSWSENNLHNALQALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWRPDDLERALESIRSGLSSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALDAVRVGQMSINQAAIHFNLPYSSLYGRIKRCKFEIEGTAAAGDGAIVPSQNPTGDPMVPALIADPAQHSAHIPHNMHMSHPQHNMLPQELHYPTMEPHLDAQGTQDDYSRRFYSVYHHSLTVPSDDHTDASHLTTSNHDCISTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01008443;
- 90% Identity
- iTF_01008443;
- 80% Identity
- -