Basic Information

Gene Symbol
Bgb
Assembly
GCA_027564375.1
Location
JAOPUG010000036.1:13273719-13288640[+]

Transcription Factor Domain

TF Family
CBF
Domain
CBF_beta domain
PFAM
PF02312
TF Group
Beta-Scaffold Factors
Description
Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.4e-83 3.5e-78 262.0 1.3 1 165 33 190 33 192 0.97

Sequence Information

Coding Sequence
ATGCACTCGATGAGTGACGCTGCGGCCCTGGCCGGAATGCTGCCCTTCGACTCCATGGCCCTTTACGAGCAGCCCAAACCCAGGTTCATCTTCAAAATGCCGCGGGTTGTTCCGGACCAAAAGGCGAAATTCGAGTCTGACGATCTCTTCAAGCGGCTCAGTAGAGAGAGTGAGGTGAGGTACACGGGCTATCGGGACAGGCCCCTGGAAGAGCGGCAGGTTCGCTTCCAGAACGGATGTCGCGAGGGGCATACGGAGATAGCCTTCACAGCCACAGGAACCAACCTTCAGCTCGTCTTCAACCATTCCCCCTACAGCGACCGCGAGTGTGACTTCCAGAAGGAACGCGGAAAGGTCCACCTAATAGCCCGTTTCATAATGAACGGCGTTTGCGTACGGTGGCGCGGTTGGTTAGACCTGGAAAGGCTGGACGGAGCTGGCTGCCTGGAGTACGACGAGGAACGAGCGGGGCACGAAGATGCTGCCCTCAGAGACCAGATCGAGCGCTACAACCAGAGACTGCGAGACTTCGAGGACAAGCAAAGAGCCTACAGGGATCATTCTCATCAAGATATGGAGCAATTACGAATGGCGAGCAGTCTCCACCATTCAGCAGCACCAAGATGTCATCAACAGTCACCGCGTCATCAACCTCATCCAATGCACAACCTCAAACCTCACTCACAAGGAGCAATCATCTCATAA
Protein Sequence
MHSMSDAAALAGMLPFDSMALYEQPKPRFIFKMPRVVPDQKAKFESDDLFKRLSRESEVRYTGYRDRPLEERQVRFQNGCREGHTEIAFTATGTNLQLVFNHSPYSDRECDFQKERGKVHLIARFIMNGVCVRWRGWLDLERLDGAGCLEYDEERAGHEDAALRDQIERYNQRLRDFEDKQRAYRDHSHQDMEQLRMASSLHHSAAPRCHQQSPRHQPHPMHNLKPHSQGAIIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01024618;
90% Identity
iTF_01006789;
80% Identity
-