Maru019486.1
Basic Information
- Insect
- Micropterix aruncella
- Gene Symbol
- PGBD3
- Assembly
- GCA_944547385.1
- Location
- CALYMV010003392.1:209050-287094[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-14 3.4e-10 41.2 0.0 5 271 593 831 589 834 0.79 2 2 0.22 4.5e+03 -1.9 0.1 192 248 1272 1325 1265 1347 0.72
Sequence Information
- Coding Sequence
- ATGTCGCTGTTTCGTAAGCCGAAAAAGCGCTTTCAAAGACGAGCCCTCGCCGACGATGAGGAGGAAAATGCCATGGAAGTGGAAGAATATCCAtcggcgccgccgccgccgacgaTCACTGAGAAGAAACCGAAGGACAAGCCCAAGGCGAAAGCCCTACTGAGCTTCGGCGATGAAGACGAAGAGACGGAAGTGTTTCGAGTCAAGAAATCGTCGCACAGCAAGAAGCTGCAGAGGCAGCTCGACCGGGAGCGGAAAAACCGCGAGCGAGAAACCGGCATTGTGCCCGCGCCGCCCCCCAAAGAAGGCAACGGGGAAACCACACAGGACGTTCCACAAACTGATAATAGTAGGAATAATGATCATTCCGTTAAGccGTCCTACGAAGGTCTGATTCTGAGCGGCCGCGACGCGGTGGCCGCCGGCGCGACCGGCGACGTCCTGGGCTCGGGCAGCGAGGAGAGCGAGGAGGAGGGGGGGCGGGGGGAGGAGGGGGCAAAGGGGGCGCGCAGGATGCCCTTCTCGCACGCCTTCCGGCCTTCGCGCGACGCCGTCCGCGCGATGCTCGACCGAGGACTCATACCCGACGCTGCTACTATACACGCCGCACGCAAGACTAGacaaaagGCTAGAGAAATCACGGGGGCCGATTACGTAGCCCTTCGCAAACCTCGTCCGGAAGAAACGGCCCGGTCGACGTCGATCAACGAGTCGGCGCCGTCTTTAGGCAGCGGGCGgctggtgcgcgaggacggagACGGAGACGGCTCGGACGAGGACGCGGACCGCATGGAGGTGCGCGGGGTCATCGAGGAGAAGAAGGCCTCCGCCGCGGACGACGCGGGAGGGCCCAGGAAAGGCGCACGCAGGAAAGAAGATACCAGGAAGGTTACTCACGCCTCTGACCCTGACAGCGGTGGAGAAGAATGGGAAGCGCAACAAATCCGGAAAGCGGTCACTGGCGCACAGATAATGGCCGCTCAGAATGCGTCTGCGTATTACCACGGCGGCGTAAGTGGCTATGCCATGCCGCCAACCTATTCCGACATACCGCAAATGCCTGGAGGGGTACCTGCTCTTCCGCCGCTGCCACCGCAGGTTAACTTAGCATCTCACCTAATGCCTCTGCTGCCTCCCGGGGAAACTCCAAACCTTCCGAAAACCATTAGTGCTCTGAAAGAGAGGATACAGAACATGAAAGTCGGTCACCTGAAAACAGTGGACCAGGTATCGAAGCTGAACGACGAGATGACAAAATCCGGCGACGCAGCCTTTCGTTCTTCGGACAGCGCCAAGAAGCACAGCACTCGGTACAAACTCTACCAGAAACTTCGGGGCTACTTTACTGATCTACTGGAGTGTCTTGATGAAAAGTTGCCATTACTAGAATCCTTAGAGCAAAGAAGTATAGCTTTACGGAGGAAGCAATATTCATTTCTAGCTGAAAGACGAAGGGCGGATGTCAGGGATCAAGCGCAAGATGCTTTATTACTCACAGCTAAGCCCGGCACGGTAAAACCGCCCGACGGAGAAGAGAAGACGCGACGCGCAGCCGAGCGAGAGGGAAGACGACAGCGCAGACGAAGGGCCAGGGAAATGGCGGCAAACGCTGCCCTCTCCGTCACCAAACCCAGTCATCGCGACGGCGACAGCAGCGATGATGAAATACCGCAAGCCGACGAAGCGTCGTACTCGCAGACCGAAGATTTGATACGGGAAGATGCCTCGCGTCTCTTTTCGGACGCCTTACCGTCGTATTCGAGATTGAGAAGTGTGCTCGCGAGGGCATCTCTGTGGCGGAATAGAGACCGAGCGGCTTACAACGATGCGTTTGTTGCCGACTGTTTACCTAAGCTGGTTGCACCTTATGTTAGAATGGAGCTATTACTGTGGAATCCTATTGCTGGGAAAGATGATATCAATTTTGAGAATATGGCCTGGTACAGATCGTTGATGATGTATAGCGTCGGTCTTCCTCCCGCGGGCGACCCTCGTGATGAAGTTTCCTCCGATTCCGACGTGTCTATGGACGGCGACATGGAAGACCACCTGAAAACGGTCATATCCAAAGACAGCGCGGAAACCTTGGCCGAGGATGCAGACACGATGATCATTCCGAAAGTTATCGCCGGTGTTATAGCGCCTAAGCTAGCTGAATTGATTGAAGCATCTTGGGAACCACTCTCCAATAGGGGTACGGCGCGGCTCATCTCTCTGCTTCACTCTTTGGGCAGCGGATCAAAATTTCCCGGTATACAACCGAGGACTCTACCGGTAGCCAACGCACTGACCGAACGATTAGCTTCGTCCATTTCCAATGATGTATTCGTTCCTGTCCTACCTCGGAGCATTATAGAATCTCGTGGCGGAGCATTCTTCAACCGTCAGGTGAACAGCGCCACCCGACTGCTGAAGAACAGTCTCCGAATGCAGGGAGTGCTGTCTGACGCTGCACTTGAGCGTCTCGTCATCTCGCAGCTTTTGGACCGGTACCTCGTGAGCGCCGTGCGATGCTGCCCTCcggTCAACCCGGATGAGATATACGATATATTACATGATGGAAGTCTTTCGGAGATAGAAGAATTGAACCAGGATGAACTTGAATTTGAGCCAAATAACTTATTCAACCAAACAGCGGAGGAAGGTTCCTCGGATGAAGAGCCTGATGAGAATGTTGCCATGGATAGCTCTCTCTTTTCACCAATGAGTCCTCCGCCGGTGATGCAGTCACCTCCTGCATCGCTACCAAGTACTTCCACACGAACGAGAAAGAATGCTCATCGAGGAAGGTCAGTTCCGACAGTAAAGGACATACGAGGTGAGAGATCGCAATCCGCTACAAACGTACGAGGAATAAGATCAGCGTCTACACCTGGGAGTAGTCAACGTTCGTCGCGAAAACGAATTTGGAAGCAGGTTCCATTTGCAGATAAGTCGCACTCCTATTCTGCACTGCCTGCGAAACCGGTAAGGCATCCAATTGATTACTTTCATGATTATTTTGGCAATGAGTTCTTAGACAAGATAACTCATTGTACTAATTTATATTATCTACGCACAACAGGCCGAGAGCTAAAAAGCACAAGTGCTGAAATTGCAAAGCTTTTTGCTATACATATTATCATGGGCTGTACTCCTTACCCCAGAATTCCAATGTATTGGAGAGCTGGTACGAAGTTGGGGTTGATCTGTGACTTAATGCCAAGGGACAGGTTTCTTACCCTTCGCAATGCGCTCCATGTAGTTGATTCCGACAGTCCGGCTGAAACTGAAAAGGACAATCCGCTATGGAAAGTCCAgccaatgataaataaaataaaggaaacctGCAATCATTTAGAGAGGCTGCCAGGGTTCTATTCCATAGACGAACAGATGATCCCGTTCACAGGCCGCTGTAAACTACGtcaagttgtaaaaaataagcCACGACCTGTGGGcctaaaaaactttgttttgaaTACTAGCGATGGGCTAATGCTAGATTTCGACATTTACAAAGGGGCAAAATCTATGTTTGGCGATACAAATCTCGGTCTTGGACCTTCTATAATATTGCACTTGGCTAAGAGTATTCCACCTGGCAGCTGTGTTTACCACGACCGCTATTTCACCACAGTTCCATTGATTGAAGAGATGGAAAAGTTAAAACTGCACTCTACAGAAACAATAATGCAGAACCGAATTCCTGACCGAGCCACAATCAAATTTACAAAAGATTCCCAGATGAATCGCGGTGACTCTGAGCAGTTTGTTTGCAACTCTACTGTCATTGTCAAATGGAAAGATAACAAGTCAGTGTTACTAGCATCAAACTGTACTGGCTCCGGGGTGACGACTAATGTGAACAGATGGAATAAAACTCTTAAAAGTTATGTCAATGTTTCAGCTCCAAAAATAGTGCAAAATTATAACCAATACATGGGGGGAGTTGACGTACTCGATCAGCAGATGGAGTATTACAGAACCTTCATTAAAACTAAGAAATGGACACTGAAAGTGATAATTCACTTTCTCGATCTCGCCTTGGTAAACTCTTGGAGGCTGTATAAAAACGACTGTTTGGCAAACGGTTTACTAAGAAAAGACACAAAGGCACTACTCGACTTTCGCATGGATGTGGCCGACTCCTTGTCTAGTACACCAGAAAGAGGTCGTATAGAATCTGAGGAAGATGATCATCCGCCGGCTTCTCATCGAAACTACAAAATCTACCGGCCCACCAATGCGCCATCTGAAGCTAAACGGTACGATGGCTACGAGCACTACCCCATCAGTGACGATATAAAAGCACCGAGAACCTGTCGAATGGAAAACTGCGGCAGTCGTTCCAAAATTAAATGTGACAAATGCGACGTATACTTGTGCCTTTCATGCGATAAAAACTGTTTCAAGATTtatcacaaaaattaa
- Protein Sequence
- MSLFRKPKKRFQRRALADDEEENAMEVEEYPSAPPPPTITEKKPKDKPKAKALLSFGDEDEETEVFRVKKSSHSKKLQRQLDRERKNRERETGIVPAPPPKEGNGETTQDVPQTDNSRNNDHSVKPSYEGLILSGRDAVAAGATGDVLGSGSEESEEEGGRGEEGAKGARRMPFSHAFRPSRDAVRAMLDRGLIPDAATIHAARKTRQKAREITGADYVALRKPRPEETARSTSINESAPSLGSGRLVREDGDGDGSDEDADRMEVRGVIEEKKASAADDAGGPRKGARRKEDTRKVTHASDPDSGGEEWEAQQIRKAVTGAQIMAAQNASAYYHGGVSGYAMPPTYSDIPQMPGGVPALPPLPPQVNLASHLMPLLPPGETPNLPKTISALKERIQNMKVGHLKTVDQVSKLNDEMTKSGDAAFRSSDSAKKHSTRYKLYQKLRGYFTDLLECLDEKLPLLESLEQRSIALRRKQYSFLAERRRADVRDQAQDALLLTAKPGTVKPPDGEEKTRRAAEREGRRQRRRRAREMAANAALSVTKPSHRDGDSSDDEIPQADEASYSQTEDLIREDASRLFSDALPSYSRLRSVLARASLWRNRDRAAYNDAFVADCLPKLVAPYVRMELLLWNPIAGKDDINFENMAWYRSLMMYSVGLPPAGDPRDEVSSDSDVSMDGDMEDHLKTVISKDSAETLAEDADTMIIPKVIAGVIAPKLAELIEASWEPLSNRGTARLISLLHSLGSGSKFPGIQPRTLPVANALTERLASSISNDVFVPVLPRSIIESRGGAFFNRQVNSATRLLKNSLRMQGVLSDAALERLVISQLLDRYLVSAVRCCPPVNPDEIYDILHDGSLSEIEELNQDELEFEPNNLFNQTAEEGSSDEEPDENVAMDSSLFSPMSPPPVMQSPPASLPSTSTRTRKNAHRGRSVPTVKDIRGERSQSATNVRGIRSASTPGSSQRSSRKRIWKQVPFADKSHSYSALPAKPVRHPIDYFHDYFGNEFLDKITHCTNLYYLRTTGRELKSTSAEIAKLFAIHIIMGCTPYPRIPMYWRAGTKLGLICDLMPRDRFLTLRNALHVVDSDSPAETEKDNPLWKVQPMINKIKETCNHLERLPGFYSIDEQMIPFTGRCKLRQVVKNKPRPVGLKNFVLNTSDGLMLDFDIYKGAKSMFGDTNLGLGPSIILHLAKSIPPGSCVYHDRYFTTVPLIEEMEKLKLHSTETIMQNRIPDRATIKFTKDSQMNRGDSEQFVCNSTVIVKWKDNKSVLLASNCTGSGVTTNVNRWNKTLKSYVNVSAPKIVQNYNQYMGGVDVLDQQMEYYRTFIKTKKWTLKVIIHFLDLALVNSWRLYKNDCLANGLLRKDTKALLDFRMDVADSLSSTPERGRIESEEDDHPPASHRNYKIYRPTNAPSEAKRYDGYEHYPISDDIKAPRTCRMENCGSRSKIKCDKCDVYLCLSCDKNCFKIYHKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -