Mmed028377.1
Basic Information
- Insect
- Microplitis mediator
- Gene Symbol
- ZFX
- Assembly
- GCA_029852145.1
- Location
- CM056854.1:14307668-14312101[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.4 2e+02 3.7 0.1 3 23 15 35 14 35 0.94 2 15 3.6 5.1e+02 2.4 2.2 1 23 924 947 924 947 0.80 3 15 0.0052 0.75 11.3 0.8 2 23 1034 1056 1033 1056 0.95 4 15 0.0016 0.22 13.0 0.1 2 23 1069 1090 1068 1090 0.97 5 15 1.7e-05 0.0024 19.1 3.1 2 23 1093 1114 1092 1114 0.97 6 15 0.0019 0.28 12.7 0.3 1 23 1120 1142 1120 1142 0.97 7 15 2.8e-05 0.004 18.5 4.5 2 23 1149 1170 1148 1171 0.95 8 15 0.12 18 7.0 3.7 5 23 1184 1202 1183 1202 0.97 9 15 2.5e-05 0.0036 18.6 1.5 3 23 1209 1230 1208 1230 0.97 10 15 0.014 2 10.0 0.5 2 23 1246 1266 1245 1266 0.97 11 15 7.5e-05 0.011 17.1 0.7 1 20 1272 1291 1272 1294 0.92 12 15 9.3e-05 0.013 16.8 2.7 1 23 1302 1324 1302 1324 0.99 13 15 0.0026 0.37 12.3 3.2 1 23 1330 1352 1330 1352 0.97 14 15 4.7e-06 0.00068 20.9 3.9 1 23 1358 1380 1358 1380 0.99 15 15 0.0005 0.072 14.5 6.0 1 23 1386 1408 1386 1409 0.95
Sequence Information
- Coding Sequence
- ATGGAACTCGGCGTTACGACAGATACCGGAGGGGCGGTCGCATGCCCTGTATGTACACTCTACCTCAGAGAGGGTATAAGTCTTCAGAGGCACTTGGACACCCATCCAAAGGAACAAGTTATAGAGGCACTGATAAAAGCCAGTGGCTCGTCGTCAAATTTGTCGTCTCTTCAGTTACCTCAAACCCAAGTGCCTCAGGTACCGCAAACCCTTCAGCCGTCACCGCCGCAACAGCAGGTCAATGCCCAAAGCTCAACTTCAGCTCCAACAGCAGCAGCTGTTGCTGCTGCTCACATTCCTACGCAGGCCCCGTTTCCCATTGGACCTGTCTTTGAGTGTCCACCGATCAATGCAATGATGCCACCACAGTTTGCCtcttttaattatcaacaatttGTCAACAATGGTACTATGATGATTCCACAGTACGCGATGGCACCACCTCAGGCAAATCAGATGATGCAAATGCTCTATAATCCATACATGTACCAACAGCAACAGGTACCGACTGTGCAGATGATTTCACCAGTATCAGCACTTCCAACAACCCGTATTAGGCCGGTAGTCACTGTAGCTAACACTGAAACTACCAGAAATGTTATGATATCTACTAGTACTAATGAACCTAAACAAATAATACCTGAGATGATTTCAGAGGCAAATATGGAAAGAATTTTACCAGACATGGACACTTGTACAAATTCAAATCAACAATCGACAGAAAATACAACAGATATACGACACGATGATCATGACGGTGATAATTTGGTTAGACAACTGGATCATCGAGATCAGCAAACCCAGAGTAATTCACCGAGACGAGTGGCAGATAATAGTGAAGTTGTGAGAAATGATGCTGAATCAGCAGTGCCTGAAGAAGAAAAGTCTGAGAGTATTCTTCCGGATATGGAAGAACCAGAAGTTGATAATACTGGTGATCAATGTAGAAATGAACAGCATTTACAACAGGATCAAGAACATCAGACATTTTCATCTACATATAATCAAATTGACAGTGAAAATAGTGGTACAGATACACGACTAAATCAGCATAGACAAGAACAAGATAAATTTGAGACTCAAGAACCGagtaatattgaaaaattaaactcTTCAAAGTCTATTGAGTCACAAATAAATTCAGCTCAAACTCCGATGGTATTAGAAACATGTCAGCAAAATGAAGAAGAACATCTCGAGCATCTTCTTATTACAATGATCGAGTCTGGTTTTGTTGAGACGCATGAGCAAACAAATGTTGTTCATGAACCCAATTCAGAATCTAACCTTAAAACAATTACAACCCAAAATGAAGAACAAatggaagaagaagaagaacaagaagaagaagaagagatagaagaagaagaggaagaagatgatgatggtgaagaacaagaagaagaatcacaaaataattttacaacgATTGACGaaactaaatatattaatgacAGTGAAGCTTGCGTAGAAAGGGAAAAGTGCATTGACACGATTATTATTGACGAATGTGACTTGGACTATGCATATCGGTATAGACATAGTTTATCAGCGCCTGCGTCTCCAGTATCagcgtcaaaaaaaatatcacggCCTTACACAAGATCAGAGTGTGGTTCAactgaaaatcttaatttttatccAGCTGGTTTTGATGCTACTGCACTGCAAgaagaagaagaagaagaggaagaagaagCTAAACGTGTGGGTGATAATTTTGATGAAGAGGATATGGAGATTGAAGAAATAGCTAGTCCACATACACCAttcattaaacaaaatgatgattttgatAATGCACGTTCTCATACGCCATTATCAGCAATCAGTGGTATCTCTGGTCTTCGAGTACGTAGCGATCTTAGTAAACCATCATCACCAGTTTCGATGCGGTCATTTGATCACATGGAAGGTGATAGTCATGATGAAGAAAGCACTGATTCCATAACAAGTCAGAAACATCAAGTTGATTGTTCACAAGTTGATCACAGTGTAGTAAGGTCAAGTCATGATATATCTGAAGGTGCTTGTATTGATGCTGTAAgaaaatcagaaaataataCCAGTGGAATCTTTCATCAGTCTGTTATTACTGAGCATGTTAGCTCATTTCCAGCAATTCATTCGCAACAATCAATaactaatgataattattcaatatctaatagtaaaattataaCGCGTCAATCAGATTTAAGTTGTGGTTTATCCCAAACAATAGAACCTACTACGACAAGTATCGAATCTAAGAGTTTTCAATCAACATTAACTAAAACAGTAAACAACATACCAACGACTGAGCTTCTTAATATCAACGAAGACGCCCATTCAGGTCCTATGAATGTATTCGAATTTGATGGACTTCAAATTCTTGTTCCTAGTACATTTATAAGTGAATCCTCGCAGAAGGCAATCAGTGCAACAAGTCAACAGTCAATGGCAAGCAGTGAAGGAGGTGCAGGTATTGATGAAGAAGTTAAGAGTGTCAACATGCGGGCTGATGAGACGATGCCACCAAGGGGAGAGCTGTCTGAGCAGGAAAGCAACGGCTGCACGGAACACTCGGCTTGGCAGCTATACGTTGGTCAAGAGTCTTCCCGTATGTCGACATCGTATGATCTGATGGCACGTGAAAGCTGGGAAGAGTCAGAGGGATCTGATAATGAGGCCGGTGTACCCCTATTGGATAGTCGTTCACTCGCTACTCACTTTACTTCCAGCTTATTTCTTGATCGAGATAGAAAAACACCAACAAAACAACGTACATTTAAATGTTCACAATGTTCAGAGGTTTTTGATTGCCCGAAAGAACGACGTGTTCACAGTACAACTGTACACAAAGAAGCTGGTCCAAGTAACAGTTGCAGTAACAGTGATATTGCCGAACAATCTGAAACAAAAGATATAAAACTTCTCGATGGTCCCATGAATCcttttgaggatatttttgttCCTGGTATACATGTTCAACAGGCCTATCAACAGCAACAACCGTTGCTACATCAAATGCAACCACCACAACAATTAAGTGACATCAGTAAAGTTGAAACTGATGAAAAAACAGAAAGTCTTGCTTTAACACAGGGCATAGAAATTTCATGTGCCATGTGTACACAACGTTTTAGTTCTGAACGAAGTTTACAGATGCACAATAGACGTGTTCATGGTACCGAAGTTGCACGACGTCTTCATGATATTTCAAAATGTCAAATATGCAATGAAGAATTTCCTTCAGTCGCTTTATTTAATgctcatttaaaaattcatccgCTTGAATGTTCTCAAtgtggtaaatatttttatcgtaaacaaaatttcaaattacataTGAAACGTCATCTTGGTATTAAACCATTTCCATGTACCGTTTGCGATAAAgcatttttaacaaaacaaaaattagatgAACATATGAATGGTCATACGGGTAATGCACCAGTTAAATGCAATCTCTGTAATGAAACATTCCGCAGATACTCAAATTTAACTCAACATAAAAATCGTcatcatttaaatataaaacgtaaattaaaagattataTATGTCACTGTGGTGAAGTatttcatacaaaaaaaaagcttgCTTGGCACAAGGAAACACACGATGAAAAACCTAAAGCATGTACCTATTGCAATGAAAGATTTATACACATGGCTAGTTTAACACGTCATATGCGACGTGCTCATAATCGTCGTTTTGTACCAGATGCTCAAcgtgaaaatgaaaatgttGAATGTCCAATATGTAAGTGCATCTATTTACGTTCATCATTGTCGGTTCATATGCGTGTACACAATGGAGAACGTCCTTATGAGTGTCAGGTGTGTTCGAAAGCATTCAGTACCAAGTGGAACTTACAATTACATAAATGGACTCATGCAGCACGTAGCACCAAACCCTTTAAGTGCAATCAGTGTAGCGCTGCGTTTTATCGTCACAGCGATTATACAGCACACATGAACTCACATAGAAATGTAAGACCGTATACATGTAATTATTGTGGCGCtcaatttataagaaaatacaattgtttaaGACATGTTAAAGAACATGAAGAAAATAAAGCGTACACGTGTGACGTATGCAATAAAACTTTTCACCGGTCATATTATCTAAAAGAGCATTTACGTGTTCACAGTGGTGCACGACCATACGCGTGTCACATATGCGGTAAATCAAGTAGTACCAAGTCAAATCATAATAAGCACGTGAGAATTCATCATGCTCGTGAGCCTGTaaatactgaaaattaa
- Protein Sequence
- MELGVTTDTGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASGSSSNLSSLQLPQTQVPQVPQTLQPSPPQQQVNAQSSTSAPTAAAVAAAHIPTQAPFPIGPVFECPPINAMMPPQFASFNYQQFVNNGTMMIPQYAMAPPQANQMMQMLYNPYMYQQQQVPTVQMISPVSALPTTRIRPVVTVANTETTRNVMISTSTNEPKQIIPEMISEANMERILPDMDTCTNSNQQSTENTTDIRHDDHDGDNLVRQLDHRDQQTQSNSPRRVADNSEVVRNDAESAVPEEEKSESILPDMEEPEVDNTGDQCRNEQHLQQDQEHQTFSSTYNQIDSENSGTDTRLNQHRQEQDKFETQEPSNIEKLNSSKSIESQINSAQTPMVLETCQQNEEEHLEHLLITMIESGFVETHEQTNVVHEPNSESNLKTITTQNEEQMEEEEEQEEEEEIEEEEEEDDDGEEQEEESQNNFTTIDETKYINDSEACVEREKCIDTIIIDECDLDYAYRYRHSLSAPASPVSASKKISRPYTRSECGSTENLNFYPAGFDATALQEEEEEEEEEAKRVGDNFDEEDMEIEEIASPHTPFIKQNDDFDNARSHTPLSAISGISGLRVRSDLSKPSSPVSMRSFDHMEGDSHDEESTDSITSQKHQVDCSQVDHSVVRSSHDISEGACIDAVRKSENNTSGIFHQSVITEHVSSFPAIHSQQSITNDNYSISNSKIITRQSDLSCGLSQTIEPTTTSIESKSFQSTLTKTVNNIPTTELLNINEDAHSGPMNVFEFDGLQILVPSTFISESSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLMARESWEESEGSDNEAGVPLLDSRSLATHFTSSLFLDRDRKTPTKQRTFKCSQCSEVFDCPKERRVHSTTVHKEAGPSNSCSNSDIAEQSETKDIKLLDGPMNPFEDIFVPGIHVQQAYQQQQPLLHQMQPPQQLSDISKVETDEKTESLALTQGIEISCAMCTQRFSSERSLQMHNRRVHGTEVARRLHDISKCQICNEEFPSVALFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFIHMASLTRHMRRAHNRRFVPDAQRENENVECPICKCIYLRSSLSVHMRVHNGERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEENKAYTCDVCNKTFHRSYYLKEHLRVHSGARPYACHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00379092;
- 90% Identity
- iTF_01004535; iTF_01003738;
- 80% Identity
- -