Basic Information

Insect: Microplitis mediator
Gene Symbol: -
Assembly: GCA_029852145.1
Location: CM056847.1:2060521-2062912[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00031 0.044 15.2 0.1 1 23 266 288 266 288 0.97

2 18 0.003 0.42 12.1 8.2 1 23 294 316 294 316 0.97

3 18 0.57 81 4.9 0.1 1 16 322 337 322 343 0.75

4 18 3.7e-05 0.0054 18.1 2.0 1 23 351 373 351 373 0.97

5 18 4.8e-05 0.0068 17.7 2.8 1 23 379 401 379 401 0.98

6 18 5.2e-07 7.4e-05 23.9 1.2 1 23 407 429 407 429 0.99

7 18 4.4e-05 0.0062 17.9 2.8 1 23 435 457 435 457 0.98

8 18 0.0005 0.071 14.5 4.4 1 23 463 485 463 485 0.97

9 18 0.00034 0.048 15.1 0.1 1 23 491 513 491 513 0.98

10 18 3.9e-06 0.00056 21.2 1.2 2 23 520 541 519 541 0.97

11 18 1e-05 0.0015 19.9 4.4 1 23 547 569 547 569 0.99

12 18 5.9e-07 8.5e-05 23.7 1.3 1 23 575 598 575 598 0.98

13 18 0.11 15 7.2 3.8 3 23 606 626 604 626 0.96

14 18 0.00092 0.13 13.7 4.0 1 23 632 654 632 654 0.99

15 18 0.0026 0.38 12.3 0.5 1 23 660 682 660 683 0.96

16 18 0.00059 0.084 14.3 7.6 1 23 691 713 691 713 0.99

17 18 3.2 4.6e+02 2.5 0.2 2 23 720 741 719 741 0.92

18 18 9.2e-05 0.013 16.8 3.0 3 23 749 770 747 770 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00031	0.044	15.2	0.1	1	23	266	288	266	288	0.97
2	18	0.003	0.42	12.1	8.2	1	23	294	316	294	316	0.97
3	18	0.57	81	4.9	0.1	1	16	322	337	322	343	0.75
4	18	3.7e-05	0.0054	18.1	2.0	1	23	351	373	351	373	0.97
5	18	4.8e-05	0.0068	17.7	2.8	1	23	379	401	379	401	0.98
6	18	5.2e-07	7.4e-05	23.9	1.2	1	23	407	429	407	429	0.99
7	18	4.4e-05	0.0062	17.9	2.8	1	23	435	457	435	457	0.98
8	18	0.0005	0.071	14.5	4.4	1	23	463	485	463	485	0.97
9	18	0.00034	0.048	15.1	0.1	1	23	491	513	491	513	0.98
10	18	3.9e-06	0.00056	21.2	1.2	2	23	520	541	519	541	0.97
11	18	1e-05	0.0015	19.9	4.4	1	23	547	569	547	569	0.99
12	18	5.9e-07	8.5e-05	23.7	1.3	1	23	575	598	575	598	0.98
13	18	0.11	15	7.2	3.8	3	23	606	626	604	626	0.96
14	18	0.00092	0.13	13.7	4.0	1	23	632	654	632	654	0.99
15	18	0.0026	0.38	12.3	0.5	1	23	660	682	660	683	0.96
16	18	0.00059	0.084	14.3	7.6	1	23	691	713	691	713	0.99
17	18	3.2	4.6e+02	2.5	0.2	2	23	720	741	719	741	0.92
18	18	9.2e-05	0.013	16.8	3.0	3	23	749	770	747	770	0.96

Sequence Information

Coding Sequence: ATGTTCACTCTCactgatgatgataaaaataattactggtATGACAAAATGGATTTGAATAACATCATAAAAATACCCTGTGTCAATGACAGTGAAATGAACATCAATTATGATTgtatggaaaatttaaatgtcagtaatttaaataatgcagCGATGGATCCTCAATTCCAACCATTTCCGGAAATGATAGCAGCTACGACAGAAGACAATAACTACATTTCAACATCTTACGAACTTTTGGCCTCACAGAATGACAACTATTTGAATTCATTTCAAAATCCGCCAGTTCAAGATTTGGtaactcaaaatttgaacCTGCCGCCAGTTCCAATCAGTGATTACGCATTGGTCCCGTGTTATTATTTGGTTGTGCCTGAGAATGATCTGATGGCTCCAGCGAATGTCGCTCCAGTCATAGAACCGGTGGCAGAAGAAATTCCTCTAAGTCTCGAAGACGGAAATAATTTCGTTATGGTAAACATGGAAGAAATGAATACAGCaaatgataattttgtttatccTGATGAaaatgatattcaaaattctgaGGAATTATCAACTAATGAacgaaatgaattttttattgatgagaTTTGTCAGACTGGTTCTTCTATCGCGAGTCCTGTAGCTCACGATTTACAATCAATGGATTCTGTAGAGACGGAAAAACTGATTGACGCACCAGCAGAGTCATCACCGacccaaGTCGAACAAAGTCTACCAAATCCATGTGAGGCCGATTCTCCCGCTAATTTTGAATCTCAAGAAACTCAACCAGAGACGGGGAAAAAGTACCAGTGTAAAATTTGTCCGCGAAAATTCAACTGGGCGAATCAGTTAGAAATCCACATGGGGATTCACGTCAGCGACAAACTGCACCACTGTCCAGTTTGTCAAGTCAACTTCTATCAGTTCCATTTTCTGAAACGTCATATGCGCACTCATACGAGTGACAAAAAGTACACGTGTGAAATTTGCCAGGAAGAATTCGACTGGCCGCAGTTTTTAGAGGAACATAACAAACGTTGTTTTGCTGTTGATAATCCCCACATGTGTGATATTTGCCAAGCAGAGTTCAGTACCAGTTACAAACTGAAACAGCACGCGCGCACTCACTCCAAAAAGAAGACATACGAGTGCAATGtctgtcataaaaaattgactaGACAGTTTTTGCTAAACACTCACATGCTTCTGCACACCGGACCCCAACGATACGAGTgtgatatttgtaaaataGAGTTCAGTAGTAATTACAAACTAAAACAGCACATGCGCATGCACACCGAccctaaaaaatatgagtgcagtgtttgtcataaaaaatttatatggcCCTCGCAATTGAATGTTCACATGCGCCATCATACCGGCGAGAAGCGATACGAGTGCGATGTTTGTCATGTCAAATTCACTACCGCCTGTAATTTGAAAAACCACAAGTACATTCACACCGGAAGAAGACCCTACGAGTGTGATATCTGTCACGCTAATTTTGCCAGGCCTCTTGATATTGCCCGGCATATAAAAATTCACTCTGCGGAAAGGAAAGACGAGTGTGAAATTTGTCACCTGAAATTTAAAGGCCCGAGGAATTTGAAGCAGCACATGCGCATACATACCAATGAGAAACCGTTCAAATGTGACAATTGTCAGTCGACATTTTCGCAAAAGTTTTATCTGACAAAACACATGCAGACTCACTACAGCGAAAAATCTTTCGAGTGCGACTACTGTCAGACTAAATTTTCCCAAAAGCCATACTTGATACGTCACATCCGCACGCTGCATTACGGTAATAATCCGTATGGGTGCAATGAGTGCAGTGAAAAATTTCACTCATTGCGGGACTTGCATCAGCACAAAAGTGTACACACTGGTGAGATTCCGTACCAGTGTGacgtttgtaaaaaaatattcttcaaGTTCAAGCATCTGCTGACCCACGAGCGAATTCACGCGGGTGAAAAATTGTACAAGTGTGACATTTGTAACGCGGGGTTCAATCAAATCGGACAGGTTCAAATCCACAAGATCAAACACCACGAGTCGCCGAAGTCTGATGACTTCAAGTGTAAATTTTGTGATGAATCTTTCATGAACTGTCAGTTGCTGAAGCATCATCTCAAGActcataaaaatgataaatttatttactgtacGATTTGTCTCTACAAGACGAGATGGCCGATGTCGCTCAAAGTCCACGTGCTCAATCACTCTAAACCTGGGTTGGTTATTTGTCATGACTGCGGGAGATCATCAAAGCGAAAAAACTTGTTGCTAAGACACAGAAATCGTTTTcacaaaaagtaa
Protein Sequence: MFTLTDDDKNNYWYDKMDLNNIIKIPCVNDSEMNINYDCMENLNVSNLNNAAMDPQFQPFPEMIAATTEDNNYISTSYELLASQNDNYLNSFQNPPVQDLVTQNLNLPPVPISDYALVPCYYLVVPENDLMAPANVAPVIEPVAEEIPLSLEDGNNFVMVNMEEMNTANDNFVYPDENDIQNSEELSTNERNEFFIDEICQTGSSIASPVAHDLQSMDSVETEKLIDAPAESSPTQVEQSLPNPCEADSPANFESQETQPETGKKYQCKICPRKFNWANQLEIHMGIHVSDKLHHCPVCQVNFYQFHFLKRHMRTHTSDKKYTCEICQEEFDWPQFLEEHNKRCFAVDNPHMCDICQAEFSTSYKLKQHARTHSKKKTYECNVCHKKLTRQFLLNTHMLLHTGPQRYECDICKIEFSSNYKLKQHMRMHTDPKKYECSVCHKKFIWPSQLNVHMRHHTGEKRYECDVCHVKFTTACNLKNHKYIHTGRRPYECDICHANFARPLDIARHIKIHSAERKDECEICHLKFKGPRNLKQHMRIHTNEKPFKCDNCQSTFSQKFYLTKHMQTHYSEKSFECDYCQTKFSQKPYLIRHIRTLHYGNNPYGCNECSEKFHSLRDLHQHKSVHTGEIPYQCDVCKKIFFKFKHLLTHERIHAGEKLYKCDICNAGFNQIGQVQIHKIKHHESPKSDDFKCKFCDESFMNCQLLKHHLKTHKNDKFIYCTICLYKTRWPMSLKVHVLNHSKPGLVICHDCGRSSKRKNLLLRHRNRFHKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01003722;
90% Identity: iTF_01003722;
80% Identity: -