Mmed008965.2
Basic Information
- Insect
- Microplitis mediator
- Gene Symbol
- -
- Assembly
- GCA_029852145.1
- Location
- CM056847.1:21712689-21714863[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 0.08 98 4.0 4.2 14 40 7 30 2 32 0.88 2 21 0.0021 2.5 9.1 5.8 2 39 24 57 23 58 0.82 3 21 0.0079 9.7 7.3 4.0 4 36 54 81 52 87 0.80 4 21 2.1e-05 0.026 15.5 5.5 4 40 81 113 78 118 0.89 5 21 0.019 23 6.0 3.0 15 38 122 146 114 150 0.81 6 21 0.00063 0.77 10.8 4.4 6 39 142 171 140 175 0.84 7 21 0.0043 5.2 8.1 5.7 13 39 176 199 166 202 0.83 8 21 0.003 3.7 8.6 3.3 13 29 204 220 198 231 0.80 9 21 0.009 11 7.1 2.0 13 29 232 248 222 256 0.77 10 21 0.0072 8.8 7.4 3.0 3 36 251 279 249 285 0.81 11 21 2.6e-05 0.031 15.2 5.4 4 40 279 311 277 314 0.89 12 21 0.0067 8.2 7.5 2.5 15 38 320 340 312 345 0.74 13 21 0.012 15 6.6 2.2 4 29 338 362 335 385 0.77 14 21 0.0038 4.7 8.3 1.4 5 39 383 412 379 416 0.81 15 21 0.75 9.2e+02 0.9 1.9 4 38 409 439 407 442 0.84 16 21 0.016 19 6.3 1.3 14 40 469 492 463 494 0.85 17 21 0.0095 12 7.0 2.1 17 43 500 523 492 524 0.86 18 21 0.031 38 5.3 0.5 14 43 561 587 554 588 0.83 19 21 3.3 4e+03 -1.1 1.6 15 26 591 602 584 604 0.77 20 21 0.074 91 4.1 2.5 15 41 619 642 609 644 0.85 21 21 0.00019 0.24 12.4 4.3 4 43 637 671 635 672 0.90
Sequence Information
- Coding Sequence
- ATGGGTATTCATACCGGTGAAAATATGCATGAGTGTCATAtttgtctaaaaaaattcaatacagCGAGTAATATGAAGTTACACATGCGTATTCATACTGAAAAAACCTCATATGAGTGTAAAGTTTGTAAAAAGAAATTCACTAGAAAACATTCTCTGAAAAGTCACATGGGTATTCATACTAGTGAAAATAAGTCTAAGTGTGAAATTTGTAAACGACAATTTACCAGATACTATTTAAAAAGTCACATGAAAATTCATACCGGCGAAAATATGCATGAGTGTAAtatttgtcgaaaaaaatttagtacaACGAGTAATATGAAGCTCCACATGCGTATTCATACTGGCACAACCTCATATAAGTCATATAAGTGTGACATTTGTAATAAGAAATTCACTAGTAAACGGTCTCAAATAAATCACATGAGTATTCATACCGTCGAAAATAAGTCGGAGTGTAGAATTTGTAAAAAGAAATTCACTAGAAATGAGAATCTAAAAATTCACATGGTTATTCATACCGGTGAAAATATGTGTGAGTGTgaaatttgtaaaaagaaaTTCACTAGAAAAGAGAATCTAAAAATTCACATGGTTATTCATACCGGTGAAAAGATGTATGAGTGTAAGATTTGTAAAAAGAAATTCACTAGAAAAGATTATCTGGGACGTCACATGGTTATTCACACCGGTGAAAAGATGTATGAGTGTGGCAtttgtaaaaagaaatttactacaaaataTCATCTGAAAAGTCACATGGGTATTCATACtagtgaaaataagtctgaGTGTGAAATTTGTAGACGACAATTTAACAGATACTATTTAAAAAGTCACATGAAAATTCATACCGGCGAAAATATGCATGAGTGTAAtatttgtcgaaaaaaatttagtacaACGAGTAATatgaagttccacatgcgtaTTCATACTGGCACAACCTCATATAAGTCATATAAGTGTGACATTTGTAATAAGAAATTGACTAGAAAAGATTATCTGAAAAGTCACATGGGTACTCATACCGGTGAAAATATGTATGAGTGTGACATTTGTAAAAAGAAATTCACTAAAAACGATTATCTGAAAAGTCACATGGGTATTCATACCGGTGAAAATATAAAAGATAATCTAGAACGTCACATGGGTATTCATACTGGTGAAAATAAGTCTGAGTGTGGAATTTGTAAACGACAATTTACCAGATACTATTTAAAAAGACACATGGAATTTCATACTGGCGAAAATATGCAGGAGTGTAATATTAGTCAACGAAAATTTACTACAAAGAAGAATCTGATGAAGCACAAGCGGTGTATTTCTTCTGCTAACATCAGCCAAACAAGTTTGAAGCTACCATTGGTACTAAAAAGCCAGAAGTATATTTCTtccggtaaaaaaatatatgaatgtaatatctgtaaagaaaaatttttggaattatcTAATTTGAAAATGCACATGCGTATACATTTAGGCGATAAGCCGTACGAGTGTAATATTTGTCAACGAAAATTTACTGAAAAGAGTAGTTTGACGAGGCACAAGCAGCGTTTCCATACCACACATGACTGTATTTCTTCTAATAAAAAACCGTATGAGAATAACATCAGTCAAAAAAGTTTGAAGCTTCCGTCGATACTGAAAAGCCTCGAGTATATTTCTtccggtaaaaaaatatatgaatgttATTTCTGTGAAAAAAAGTTCGGTCAAGAGAATAGTCTAACATTTCACATGTATACGCgtcattataacaaaaaaacgtATGAGTGTAAGATTTGTCAAGCAAGTTTCAAACTTCTGATTGAACTTAATTTTCACCTGTTTCTTCACAAATACACAAATTTGTACAAATGTGATATCTGCCGAGAAGCATATATTATAAAGGATTGTTTGAAACAGCATATGTATACACATACCGGCGAAAAATTTTACGAATGCATTGTTTGTCTTAAAGAATTCTCTCGGACTGGTCTGAAACGCCACATCCAGAACATTCACGTTGACTACAATCGATATACAGGTGACAATCCAATCAGTTAA
- Protein Sequence
- MGIHTGENMHECHICLKKFNTASNMKLHMRIHTEKTSYECKVCKKKFTRKHSLKSHMGIHTSENKSKCEICKRQFTRYYLKSHMKIHTGENMHECNICRKKFSTTSNMKLHMRIHTGTTSYKSYKCDICNKKFTSKRSQINHMSIHTVENKSECRICKKKFTRNENLKIHMVIHTGENMCECEICKKKFTRKENLKIHMVIHTGEKMYECKICKKKFTRKDYLGRHMVIHTGEKMYECGICKKKFTTKYHLKSHMGIHTSENKSECEICRRQFNRYYLKSHMKIHTGENMHECNICRKKFSTTSNMKFHMRIHTGTTSYKSYKCDICNKKLTRKDYLKSHMGTHTGENMYECDICKKKFTKNDYLKSHMGIHTGENIKDNLERHMGIHTGENKSECGICKRQFTRYYLKRHMEFHTGENMQECNISQRKFTTKKNLMKHKRCISSANISQTSLKLPLVLKSQKYISSGKKIYECNICKEKFLELSNLKMHMRIHLGDKPYECNICQRKFTEKSSLTRHKQRFHTTHDCISSNKKPYENNISQKSLKLPSILKSLEYISSGKKIYECYFCEKKFGQENSLTFHMYTRHYNKKTYECKICQASFKLLIELNFHLFLHKYTNLYKCDICREAYIIKDCLKQHMYTHTGEKFYECIVCLKEFSRTGLKRHIQNIHVDYNRYTGDNPIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01006476;
- 90% Identity
- iTF_01006476;
- 80% Identity
- iTF_01006476;