Basic Information

Insect: Microplitis manilae
Gene Symbol: -
Assembly: GCA_030273425.1
Location: CP092724.1:26651750-26654145[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00042 0.065 14.8 0.1 1 23 267 289 267 289 0.97

2 18 0.003 0.47 12.1 8.2 1 23 295 317 295 317 0.97

3 18 1.9 2.9e+02 3.3 0.1 1 16 323 338 323 344 0.74

4 18 3.9e-05 0.0059 18.1 1.5 1 23 352 374 352 374 0.98

5 18 2.8e-05 0.0042 18.5 2.8 1 23 380 402 380 402 0.98

6 18 7.3e-07 0.00011 23.5 1.5 1 23 408 430 408 430 0.99

7 18 0.0002 0.031 15.8 4.1 1 23 436 458 436 458 0.98

8 18 0.00028 0.044 15.3 4.5 1 23 464 486 464 486 0.97

9 18 0.00035 0.054 15.1 0.1 1 23 492 514 492 514 0.98

10 18 4e-06 0.00062 21.2 1.2 2 23 521 542 520 542 0.97

11 18 1.6e-05 0.0025 19.3 6.6 1 23 548 570 548 570 0.99

12 18 1.6e-06 0.00025 22.4 2.8 1 23 576 599 576 600 0.97

13 18 0.11 17 7.2 3.8 3 23 607 627 605 627 0.96

14 18 0.0013 0.2 13.3 5.7 1 23 633 655 633 655 0.99

15 18 0.0027 0.42 12.3 0.5 1 23 661 683 661 684 0.96

16 18 0.0006 0.093 14.3 7.6 1 23 692 714 692 714 0.99

17 18 3.3 5.1e+02 2.5 0.2 2 23 721 742 720 742 0.92

18 18 2.1e-05 0.0033 18.9 2.0 1 23 748 771 748 771 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00042	0.065	14.8	0.1	1	23	267	289	267	289	0.97
2	18	0.003	0.47	12.1	8.2	1	23	295	317	295	317	0.97
3	18	1.9	2.9e+02	3.3	0.1	1	16	323	338	323	344	0.74
4	18	3.9e-05	0.0059	18.1	1.5	1	23	352	374	352	374	0.98
5	18	2.8e-05	0.0042	18.5	2.8	1	23	380	402	380	402	0.98
6	18	7.3e-07	0.00011	23.5	1.5	1	23	408	430	408	430	0.99
7	18	0.0002	0.031	15.8	4.1	1	23	436	458	436	458	0.98
8	18	0.00028	0.044	15.3	4.5	1	23	464	486	464	486	0.97
9	18	0.00035	0.054	15.1	0.1	1	23	492	514	492	514	0.98
10	18	4e-06	0.00062	21.2	1.2	2	23	521	542	520	542	0.97
11	18	1.6e-05	0.0025	19.3	6.6	1	23	548	570	548	570	0.99
12	18	1.6e-06	0.00025	22.4	2.8	1	23	576	599	576	600	0.97
13	18	0.11	17	7.2	3.8	3	23	607	627	605	627	0.96
14	18	0.0013	0.2	13.3	5.7	1	23	633	655	633	655	0.99
15	18	0.0027	0.42	12.3	0.5	1	23	661	683	661	684	0.96
16	18	0.0006	0.093	14.3	7.6	1	23	692	714	692	714	0.99
17	18	3.3	5.1e+02	2.5	0.2	2	23	721	742	720	742	0.92
18	18	2.1e-05	0.0033	18.9	2.0	1	23	748	771	748	771	0.97

Sequence Information

Coding Sequence: ATGTTCACTCTCACTgatgatgataaaaacaattactTGTATGACAAAATGGATTTAAATAACATCATTAAAATACCCTGTGTCAATGACGGTGAAATTAATGTCAACTATGATTgtatggaaaatttaaatgtcagtaatttaaataacgcAGCGATGGATCCTCAGTTCCAACCATTACCGGAAATAATAGCAGCCACGACAGaagataataattacatttcaACATCTTATGAACTTTTGGCCTCGCAGaatgacaattatttaaattcatttcaaaACCCGCCAGTTCAAAATTTGGTTACTCAAGATTTGAACCTGCCGCCTGTTCCAATCAGTGATTACGCATTGGTACCATGCTATTATTTAGTTGTACCTGAGAATGATATGATTCCTCCAGCGAATGTCACTCCAGTGATAGAACCAGTTGCAGAAGAAATTCCTCTAAGTATTGAAGATGGTAATAATTTTGTTGTGGTAAACATGgaagaaattaataaagcaaatgatgataattttgtttatcCTGATGACAATGAAGTCATTCAAAATTCTGAggaatttttaactaatgaacaaaatgaattttttattgatgaaatttGTCAGACTGGTTCTTCTATCGCCAGTCCTGTAGCTCATGATTTACAATCTATAGATTCTGCAGAAATAGAAAAACTGACAGACGCACCAGCAGAGTCACCAACACAAATCGAAGAAAGTCTGCCAAATACATCCGAGGCCGTTTCTTCTAATTTTGAATCTCAAGAAACTCAACCAGAGACGACGGGAAAAAAGTTCCAGTGTAAAATTTGTCCAAGAAAATTCAACTGGGCGAATCAGTTAGAAATCCACATGGGGATTCACCTCAGCGATAAACTGCACCACTGTCCAGTTTGCCAAGTCAACTTCTATCAGTTCCATTTTCTGAAACGTCACATGCGTACTCATACAAGTGACAAAAAGTACGCGTGTGAAATTTGTCAAGAAGAATTTGACTGGCCTCAGTTTTTGGAGGAACACAACAAACGTTGTTACGCTGTCGATAATCCGCACGTGTGTGATGTCTGCCAAGCAGAGTTCAGTACCAGTTACAAACTCAGACAGCACGCGCGCACTCACACCAAAAAGAAGACATACGAGTGCAATATTTGTCATAAGAAATTAACTAGACAGTTTTTGCTAAACACTCACATGCTTCTTCACACCGGGCCCCAACGATACGAGTGTGATATTTGTAAAATAGAGTTCAAAAGTAATTACAAACTCAAACAGCACATGCGCATGCACACCGACCCTAAAAAATACGAGTGCAGTTTTTGCCACAAAAAGTTTATATGGCCCTCGCAATTGAACGTTCACATGCGCCATCATACCGGCGAGAAGCGATACGAGTGTGATATTTGTCATGTTAAATTCACTACCGCctgtaatttgaaaaaccaCAAGTACATTCACACCGGAAGAAGACCGTACGAGTGTGATATCTGTCATGCCAATTTTGCTAGGCCTCTTGATATTGCTCGGCATATAAAGATTCATTCTGCGGAAAGGAAAGACGAGTGTGAAATTTGTCACTTGAAATTTAAAGGCCCGAGGAATTTGAAACAGCACATGCGCATACATACCAATGCCAAACCGTTCAAATGCGACCATTGTCAGTCAACATTTTCGCAAAAGTTTTATCTGACAAAACACATGCAGACTCACTACAGCGAAAAATCTTTCGAGTGCGACTACTGTCAGACTAAATTTTCCCAAAAGCCATACTTGATACGTCACATCCGCACGCTGCATCACGGTAATAATCCATATGGGTGCAATGAGTGCAGTGAAAAGTTCCACTCGCTGCGGGACTTGCATCAGCACAAAAGTGTACACACTGGTGAGATTCCGTACCAATGTGacgtttgtaaaaaaatattcttcaagCACAAGCATCTGCTGACTCATGAGCGAATTCACGCTGGGGAGAAATTGTACAAGTGTGATATTTGTAACGCGGGGTTCAATCAAATCGGGCAGGTTCAGATTCACAAGATCAAACACCATGAGTCGCCCAAGTCTGATGACTTCAAGTGTAAATTTTGCGATGAGTCTTTCATGAACTGTCAGTTGCTGAAACATCATCTCAAGACTCATAAAAAtgagaaatttatttactgtaCGATTTGTCTCTACAAGACAAGGTGGCCGATGTCACTCAAAGTCCACGTGCTCAATCACTTGAAACCTGGACTGTTTATTTGTAATGACTGCGGGAGATCATCAAAGCGAAAAAACTTGTTGCTAAGACACAGAAATCGTTTTCATAAAACGTAA
Protein Sequence: MFTLTDDDKNNYLYDKMDLNNIIKIPCVNDGEINVNYDCMENLNVSNLNNAAMDPQFQPLPEIIAATTEDNNYISTSYELLASQNDNYLNSFQNPPVQNLVTQDLNLPPVPISDYALVPCYYLVVPENDMIPPANVTPVIEPVAEEIPLSIEDGNNFVVVNMEEINKANDDNFVYPDDNEVIQNSEEFLTNEQNEFFIDEICQTGSSIASPVAHDLQSIDSAEIEKLTDAPAESPTQIEESLPNTSEAVSSNFESQETQPETTGKKFQCKICPRKFNWANQLEIHMGIHLSDKLHHCPVCQVNFYQFHFLKRHMRTHTSDKKYACEICQEEFDWPQFLEEHNKRCYAVDNPHVCDVCQAEFSTSYKLRQHARTHTKKKTYECNICHKKLTRQFLLNTHMLLHTGPQRYECDICKIEFKSNYKLKQHMRMHTDPKKYECSFCHKKFIWPSQLNVHMRHHTGEKRYECDICHVKFTTACNLKNHKYIHTGRRPYECDICHANFARPLDIARHIKIHSAERKDECEICHLKFKGPRNLKQHMRIHTNAKPFKCDHCQSTFSQKFYLTKHMQTHYSEKSFECDYCQTKFSQKPYLIRHIRTLHHGNNPYGCNECSEKFHSLRDLHQHKSVHTGEIPYQCDVCKKIFFKHKHLLTHERIHAGEKLYKCDICNAGFNQIGQVQIHKIKHHESPKSDDFKCKFCDESFMNCQLLKHHLKTHKNEKFIYCTICLYKTRWPMSLKVHVLNHLKPGLFICNDCGRSSKRKNLLLRHRNRFHKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01003722;
90% Identity: iTF_01003722;
80% Identity: -