Mman003465.2
Basic Information
- Insect
- Microplitis manilae
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_030273425.1
- Location
- CP092721.1:8158952-8161395[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.3e-109 6.5e-105 351.8 35.7 3 300 34 330 31 330 0.96 2 3 0.011 2.1e+02 2.1 2.1 122 171 330 379 329 383 0.90 3 3 0.1 2e+03 -1.1 5.4 195 238 362 404 350 405 0.61
Sequence Information
- Coding Sequence
- atgaacacAATGGAGTCAGCGATAACTGGTCGAAGACGTGCTGCTAGTCGGCATTCTGCCGAGGATCAGGCTCTTGATCAAATAGCAAAAGAGGCTGGTGAGAGATTAGCAGCACGAAGACAAGCTAGAGCTGAAGCGCGAGAAATTCGAATGAGAGAGTTGGAGAAACAGCAGAAAGAAGCTGAACAAAACGCTGATCGTGTTTATGATATGTGTaatgCTGATGGAACAAGGACTATGAGGGTAACGCCAGATCCTGTAAGGGCTTCACGCTTAttaacaaattcaaataattttcagtcAAGTCGTAGGTCTTCCGAAGATTCCTTAGAGGATGCTGGCCAAAGTAGAGATTTAAgaTtagagctcaaagagctcgaagaaaaatttagaaaagcAATGATTGCTAACGCTCAACTTGATAATGAAAAATCGTCCTATGTTTATCAAGTGGATTTATTGAAAGATCAATTAGAAGAATCGGAAGAATCGGCTGCTACATTGCGGCGAGAACTCAGGGAAAAAACTAGTGAGGCTAAATTACTTCAGCGCGATTGTCAACGGTTGAAAGAGGACTTTGAAATGTGCAAAACATTGCTAGAGGAAAGAGATAGACTTATagaaGAAAATGGATTGGTTATAATTGAGGATGAGGTCAGTGATGACGAAGATGCAGGAACGTCCAATGGAATTgtaaatcgtaaaaaaaaagtactagtCAGTACGGAAGCTGCTGAATTGTTACAGAATGCTGGTGAAGGATCTTTAGatGTTCGGTTGAAAAAGTTTGGTGCGGAGAAAAAAGAATTACAAGATGAAATTCGACACCTAAGATTAGAATTGGAAGAAGCCAAAAGTCGATTAAGATCCGAAAGATCGTCTGGATCAGTATTAgGATTAACAGACTCAGAAGACGTCCAAAGGGAAGCGAATAAATTATTGGCggattacaaatttaaattacaaaaagcCGAGCAAGATATGTCGACGTTACAAGCGACTGTCGCGAGATTAGAGAGTCAAGTTATCCGTTATAAATCTGCGGCAGAAGCTTCTGAAAAAGCTGAAGACGACTTAAAAGTCGAGAAACGAAAATTGCAGAGAGAAgTAAGGGAATCGCAGGGTCGTGTTGAAGAATTAGAAACAGCAAATTCACATTTACAAAGACGATTAGACAAATTGAAAAACGCAAAGTCCGCGTTGTTAAAAGAACTCTGA
- Protein Sequence
- MNTMESAITGRRRAASRHSAEDQALDQIAKEAGERLAARRQARAEAREIRMRELEKQQKEAEQNADRVYDMCNADGTRTMRVTPDPVRASRLLTNSNNFQSSRRSSEDSLEDAGQSRDLRLELKELEEKFRKAMIANAQLDNEKSSYVYQVDLLKDQLEESEESAATLRRELREKTSEAKLLQRDCQRLKEDFEMCKTLLEERDRLIEENGLVIIEDEVSDDEDAGTSNGIVNRKKKVLVSTEAAELLQNAGEGSLDVRLKKFGAEKKELQDEIRHLRLELEEAKSRLRSERSSGSVLGLTDSEDVQREANKLLADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDDLKVEKRKLQREVRESQGRVEELETANSHLQRRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_01003522;
- 80% Identity
- iTF_01003522;