Basic Information

Insect: Microplitis deprimator
Gene Symbol: -
Assembly: GCA_964016945.1
Location: OZ024706.1:1505108-1507512[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0003 0.044 15.2 0.1 1 23 270 292 270 292 0.97

2 18 0.008 1.2 10.7 10.4 1 23 298 320 298 320 0.97

3 18 0.55 82 4.9 0.1 1 16 326 341 326 347 0.75

4 18 2e-05 0.0029 18.9 1.6 1 23 355 377 355 377 0.98

5 18 7.6e-05 0.011 17.0 2.4 1 23 383 405 383 405 0.98

6 18 5e-07 7.5e-05 23.9 1.2 1 23 411 433 411 433 0.99

7 18 0.00019 0.029 15.8 4.1 1 23 439 461 439 461 0.98

8 18 0.00027 0.04 15.3 4.5 1 23 467 489 467 489 0.97

9 18 0.00033 0.049 15.1 0.1 1 23 495 517 495 517 0.98

10 18 3.8e-06 0.00057 21.1 1.2 2 23 524 545 523 545 0.97

11 18 9.8e-06 0.0015 19.8 4.4 1 23 551 573 551 573 0.99

12 18 1.5e-06 0.00023 22.4 2.8 1 23 579 602 579 603 0.97

13 18 0.1 15 7.2 3.8 3 23 610 630 608 630 0.96

14 18 0.0012 0.18 13.3 5.7 1 23 636 658 636 658 0.99

15 18 0.0026 0.38 12.2 0.5 1 23 664 686 664 687 0.96

16 18 0.00057 0.085 14.3 7.6 1 23 695 717 695 717 0.99

17 18 3.1 4.7e+02 2.5 0.2 2 23 724 745 723 745 0.92

18 18 4.7e-05 0.007 17.7 3.9 1 23 751 774 751 774 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0003	0.044	15.2	0.1	1	23	270	292	270	292	0.97
2	18	0.008	1.2	10.7	10.4	1	23	298	320	298	320	0.97
3	18	0.55	82	4.9	0.1	1	16	326	341	326	347	0.75
4	18	2e-05	0.0029	18.9	1.6	1	23	355	377	355	377	0.98
5	18	7.6e-05	0.011	17.0	2.4	1	23	383	405	383	405	0.98
6	18	5e-07	7.5e-05	23.9	1.2	1	23	411	433	411	433	0.99
7	18	0.00019	0.029	15.8	4.1	1	23	439	461	439	461	0.98
8	18	0.00027	0.04	15.3	4.5	1	23	467	489	467	489	0.97
9	18	0.00033	0.049	15.1	0.1	1	23	495	517	495	517	0.98
10	18	3.8e-06	0.00057	21.1	1.2	2	23	524	545	523	545	0.97
11	18	9.8e-06	0.0015	19.8	4.4	1	23	551	573	551	573	0.99
12	18	1.5e-06	0.00023	22.4	2.8	1	23	579	602	579	603	0.97
13	18	0.1	15	7.2	3.8	3	23	610	630	608	630	0.96
14	18	0.0012	0.18	13.3	5.7	1	23	636	658	636	658	0.99
15	18	0.0026	0.38	12.2	0.5	1	23	664	686	664	687	0.96
16	18	0.00057	0.085	14.3	7.6	1	23	695	717	695	717	0.99
17	18	3.1	4.7e+02	2.5	0.2	2	23	724	745	723	745	0.92
18	18	4.7e-05	0.007	17.7	3.9	1	23	751	774	751	774	0.97

Sequence Information

Coding Sequence: ATGTTCACTCTCactgatgatgataaaaataattacttgtatgaaaaaatggatttaaataatgtcATAAAAATACCCTGTGTTAATGACAGTGacattaatatcaattatgattgtatggaaaatttaaatgtcagtaatttaaataacgcaGCGATGGATCCTCAGTTCCAGCCATTACCGGAAATAATAGCAGCTACGACAgaagataataattacatttcaaCATCTTACGAACTTTTGGCCTCACagaatgataattatttgaattcatttCAAAACCCGCCAGTTCAAAATTTGGCAACTCAAAATTTGAACCTGCCGCCTGTTCCAATCAGTGATTATGCATTGGTACCATGCTATTATTTGGTTGTGCCTGAGAATGATCTGATTCCTCCAACGAGTGTCACTCCAGTAATAGAACCACTTGCAGAGGAAATTCCTCAAAGTCTTGAAGACGGTAATAATTTTGTTGTGGTAAACATGGAAGAAATGAATAAAGcaaatgatgataattttgtttattctgATGACAATGAAGTTGTTCAAAATTCTGAGGAATTAATAACTAATcaacaaaatgaattttttattgacgaaaTTTGTCAGACTGGTTCTTCTATCGCCAGTCCTGTAGCTCATGATTTACAATCGATAGATTCTGCAGAAATAGAAAAACTGACAGATGTGCCAGCAGAGTCACCAACAcaaGTCGAAGAAAGTCTGCTGCCAAATGCATCTGAGGCCGGTTCTTCTCCTGCTAATTTTGAATCTCAAGAAACTCAACCAGAGACAACGGAAAAAAAGTACCAGTGTAAAATTTGTCCTAGAAAATTCAATTGGGCGAATCAGTTAGAAATCCACATGGGGATTCACATCAGCGATAAATTGCACCACTGTCCAGTTTGCCAAGTCAACTTCTATCAGTTCCATTGTCTGAAACGTCACATGCGCACTCATACGAGTGATAAAAAGTACACGTGTGAAATTTGCCAGGAAGAATTCGACTGGCCTCAATTTTTAGAGGAACATAACAAACGTTGTTACGCTCTCGATAATCCGCACGTGTGTGATATTTGCCAAGCAGAGTTCAGTACCAGTTACAAATTGAAACAGCACGCGCGTACTCACACTAAAAAGAAGACATACGAGTGCAATGTTTGTCATAAACAATTAACAAGGCAGTTTTTGCTAAACACTCACATGCTTCTACACACCGGACCCCAACGATACGAGTgtgatatttgtaaaatagAGTTCAGTAGTAATTACAAACTCAAACAGCACATGCGCATGCACACCGACCCTAAAAAATACGAGTGCAgtttttgtcataaaaaatttatatggcCCTCGCAATTGAACGTTCACATGCGCCATCATACCGGCGAGAAGCGATACGAGTGTGATATTTGTCATGTTAAATTCACTACCGCCTGTAATTTGAAAAACCACAAGTACATTCACACCGGAAGAAGACCCTACGAGTGTGATATCTGTCATGCTAATTTTGCTAGGCCTCTTGATATTGCTCggcatataaaaattcattctgCGGAAAGGAAAGACGAGTGTGAAATTTGTCACTTGAAATTTAAAGGCCCGAGGAATTTGAAACAGCACATGCGCATACATACCAATGAGAAACCGTTCAAATGCGACAATTGTCAGTCAACATTTTCGCAAAAGTTTTATCTGACAAAACACATGCAGACTCACTACAGCGAAAAATCTTTCGAGTGCGATTACTGTCAGactaaattttctcaaaagCCATACTTGATACGTCACATCCGCACGTTGCATCACGGTAATAATCCGTATGGGTGCAATGAGTGCAGTGAAAAATTTCACTCGCTGCGGGACTTGCATCAGCACAAAAGTGTACACACTGGTGAGATTCCGTACCAATGTGacgtttgtaaaaaaatattcttcaagCACAAGCATTTGCTGACACATGAGCGAATTCACGCTGGGGAAAAATTGTACAAGTGTGATATTTGTAACGCGGGGTTCAATCAAATCGGACAGGTACAAATTCACAAGATCAAACACCATGAGTCGCCGAAGTCTGATGACTTCAAGTGTAAATTTTGTGATGAATCTTTCATGAACTGTCAGTTGCTGAAGCATCATCTCAAGACTCATAAAAatgagaaatttatttactgtacAATTTGTCTCTACAAGACAAGATGGCCGATGTCACTCAAAGTCCACGTGCTCAATCACTCGAAACCTGGACTGTTTATTTGTCATGACTGCGGGAGATCATCAAAACGAAAAAACTTGTTGCTAAGACACAGAAATCGTTTTCATAAAACGTAA
Protein Sequence: MFTLTDDDKNNYLYEKMDLNNVIKIPCVNDSDININYDCMENLNVSNLNNAAMDPQFQPLPEIIAATTEDNNYISTSYELLASQNDNYLNSFQNPPVQNLATQNLNLPPVPISDYALVPCYYLVVPENDLIPPTSVTPVIEPLAEEIPQSLEDGNNFVVVNMEEMNKANDDNFVYSDDNEVVQNSEELITNQQNEFFIDEICQTGSSIASPVAHDLQSIDSAEIEKLTDVPAESPTQVEESLLPNASEAGSSPANFESQETQPETTEKKYQCKICPRKFNWANQLEIHMGIHISDKLHHCPVCQVNFYQFHCLKRHMRTHTSDKKYTCEICQEEFDWPQFLEEHNKRCYALDNPHVCDICQAEFSTSYKLKQHARTHTKKKTYECNVCHKQLTRQFLLNTHMLLHTGPQRYECDICKIEFSSNYKLKQHMRMHTDPKKYECSFCHKKFIWPSQLNVHMRHHTGEKRYECDICHVKFTTACNLKNHKYIHTGRRPYECDICHANFARPLDIARHIKIHSAERKDECEICHLKFKGPRNLKQHMRIHTNEKPFKCDNCQSTFSQKFYLTKHMQTHYSEKSFECDYCQTKFSQKPYLIRHIRTLHHGNNPYGCNECSEKFHSLRDLHQHKSVHTGEIPYQCDVCKKIFFKHKHLLTHERIHAGEKLYKCDICNAGFNQIGQVQIHKIKHHESPKSDDFKCKFCDESFMNCQLLKHHLKTHKNEKFIYCTICLYKTRWPMSLKVHVLNHSKPGLFICHDCGRSSKRKNLLLRHRNRFHKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01003722;
90% Identity: iTF_01003722;
80% Identity: -