Mdep001838.1
Basic Information
- Insect
- Microplitis deprimator
- Gene Symbol
- TFIP11
- Assembly
- GCA_964016945.1
- Location
- OZ024706.1:11067158-11067764[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-12 4.3e-08 34.1 0.1 14 70 3 59 1 95 0.83 2 2 0.25 3e+03 -1.5 0.0 141 186 82 129 76 136 0.70
Sequence Information
- Coding Sequence
- ATGATAAAGTACTACAATGATTATAAAACACATGAACTGGATGAATTGGGGAGCAGTTTGGTTGTGCCGACATTCAAGAGTTGTCTGGCTAGTTGGAACCTGACGCTGAAGCCAAGACATTATTTAAAGTCAATGAAAGAGTGGAAAGACATACTGAACATTGATAACGCACTGGTacatgaaatgaaaaaaatgctgAATGATGGACTCTTCCTATTTGGCAAGTCTCGAGTGAACACAGCCAGTGCCTCAACTCAACCACGTattgaaAGATTCGCCGAAGCTGAACGTACTGCTTCGCTGATATTTCAAGGCTTCAAAGATCTTGTGCAGGAGTGCGAAAAACGTGGGATCCTATTCATGCCGATGGTGAATCGTTTTCACGAAGTTAAACAAATGTACAAAATTGGCAACGTACAGATCTACAATCGGGTTCCTACTCATCACAGCGCCTTATTAGACATGGCAGGACTCTAA
- Protein Sequence
- MIKYYNDYKTHELDELGSSLVVPTFKSCLASWNLTLKPRHYLKSMKEWKDILNIDNALVHEMKKMLNDGLFLFGKSRVNTASASTQPRIERFAEAERTASLIFQGFKDLVQECEKRGILFMPMVNRFHEVKQMYKIGNVQIYNRVPTHHSALLDMAGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -