Basic Information

Gene Symbol
lilli
Assembly
GCA_000572035.2
Location
NW:2406702-2468224[+]

Transcription Factor Domain

TF Family
AF-4
Domain
AF-4 domain
PFAM
PF05110
TF Group
Unclassified Structure
Description
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 0.072 8.1e+02 -1.7 0.2 4 28 23 47 21 51 0.81
2 9 2.5e-09 2.8e-05 22.9 0.7 24 141 68 179 58 201 0.58
3 9 1.2e-09 1.3e-05 24.0 0.8 341 448 279 384 257 395 0.69
4 9 1 1.1e+04 -8.4 23.9 451 500 463 499 430 530 0.46
5 9 1 1.1e+04 -16.6 27.4 119 216 564 663 499 675 0.28
6 9 1 1.1e+04 -5.8 14.9 423 482 649 705 647 713 0.84
7 9 0.044 5e+02 -1.0 10.7 419 502 723 818 717 822 0.66
8 9 0.037 4.2e+02 -0.8 14.6 114 254 1047 1132 939 1193 0.41
9 9 0.12 1.4e+03 -2.5 1.8 131 221 1234 1325 1202 1363 0.50

Sequence Information

Coding Sequence
ATGCCCTCATCCGGAGGTTATTATGACGATAGAAATCCGCTGCTCAAAGGGACCATGTCGAGCGTGGACCGGGACCGGCTTCGAGAGCGTGAGCGGCAGGCACGCGCGGCGATGTCGGTCCAGGCAGAGCAGGCCGCAGCAGCCGGAGGTCCAGAGAACTGCCACAGCCACCACAATCATGGCCATCACCATCATCACGCTAATTCCCACGTGTCTGCAGCTGCCTCGCTCTTCCGCGCCCCCGTCAaggTAAATCCTGACGCGCACGACCGAACAACTCAGCAGATCCAATCCAAGCTGGGGAACTACTCACTGGTAAAGCATCTGCTGGACGAGCCAAAGAGACTGATAGGAATTGAAGGTGTACCAGCTAGTCCAGCGCCGGGGTCGAGCTCATCTACACGTTTATCTTCGAGCACAAGTTGTAGGAGTTCGCCGTCATcacaagaatttaaaaaacctgGTGGTAATGGTCCACgaacatcatcatcatcgtcatcatcatcatcaacaacCGGCTCAACTTCGAGCCATACCTCCCAGCGCGGTGGTTTTATAAAACCCGCGGATGGGAAACCACCTTATGGTGGTCGAGGTGGCTATCCCGGACAACCAGTAAAACACGGTGGCAGTAGCAACGATCACAGAAGCCACGGGATCCTTCCCGCAAAGGGTCCACCTCCGTCAATCGCTGGTAATGCCAATTCTACCGGAAACAGCGGTGGTTTAACCTCTTCCGGAAATTGTCCTCCTGCCCCTGGTAATTCGGGTAATTTGAGCAGAGTTCACGCAGCTGCTTCCAGACTCCCAAGGTTACCTCTTGACAACgGAGTAAGACATGGCTCGGATCCAGCAGACTTGGAAAACATCCTCAAGGAAATGACGATGCCGCCCATACCACTTACAGCTATTGCACAGACACCAAGAAAAGAACTGGAATCCAAGTTCACATTCAACCCTGTACTAGCTAAGCTGACTGAGATACCGCCTGAACCTATCAAGCCGCCAcaACGTGAACGACATGGGACCACACGTTTATCAGcTGATCTTGAACGAGATTTAAGTCTCTCGGAAGACAGTGAAGATGAAGGCGTCAAGACGTCAATTTCTCGAGTACCAAGATCCACTGCAAGTCCAAGTATAAACGCTGATCATTCAACACCACTGGCACCAGCTATGACACCGGTCCCTGCACCTCTAGCACCGATGTCGCCCAGAGCATTGTCACCATTGGTGACTTTATCACCTCCGCGACCCATAAGCCCGCTCAGGACCCCACCTAAGCACACAGTGTCCGAGCGATTGCTGTCGCCGTCATCCAGCTCACCGAGAAAAGGCTCGCCGATAATGCCGATGAGGCCTCCTAGTCCTCCTGGCCAAGCGCCCTTGAGTTCCGGCAGCGCCAGCTCCAGTTCCGACTCTGGATCAGACTCGGGTACTGACAGCAGTGATGATTCTGAGGATGAAAACGCACCTCTACCACCGAAAGGTCCTTCCACACCGCCTTCCGTGTCTCCAAAAGTCCCGGTGGAAGACCCTCCTCCTGCAGAGGAGTCTAAGCCTCGTTGGAATCTCAGTAGTTTCTTCAACAAAACTGCCGTGCAAGCTGGTGACAAAAATTCAGAGAATAAAACTGCTCAgAATGAAGCAGCTCGCCGTGACAGTTCACCTGAGGAAGCCTCTCTGGATATGAGAATACGCCGGTCGGATGGAGCTCATCATAACAACGAGTGGCAGCTCGATGAAGCGTTAAAAAGAACTAGAAACGCGACGATGTTGACGGTCCTGAGTGATGGTGATCAAAATTCCGACTCggagaaaaagaagaaagaagAATCGAGATCTCAAATTCAAGATAAACCAAAAGCACCAGATGTGCGAAAACGCGGTCGTCCACGTAAAACAGCTAAAGAAACGGTCAAGAGTCCGAGAAGTCATAGAATGTCGTCAGAGGAATCTAAAGCCAGCTCTAAACGCAGTAAACCTCGTAGTGCAAGTAATCCTAAGAAAAAAACTACAGCAATACCGCTGCCAAGGGTTCCACTTGATAACAGCGACGAGTTAAGTGACTCAAGATCACGTGACAGATCGAGTGACTCGGAGTGCGAGCAGTCGAGAATATCTCCAGCCTCGACAGTGATCCCAGTTGACAAACGAAGATCACGGTTAAGTATCTCCTCGAGTGAGGACGAGAAAACGACGAATAAGCACAGCGCTTCGGAAGACGACGCGCGGTGGAGAAGACTCTCGTCAAAGCGCAATAAGCTAACAGATTCTCCAACTAAGAAGCAAGACAAGAAGAAGAGCCCCAACAAAGTTAAACCTCAGCGTCCCAGGTCAAGGATAACAAATAATTCAGGCTGTGCCTCTGATTCCGACAGTGAATTAGAGACGACGCTGAGGAACAATCGCGTACAGCCAGTCGCGAGAGTACCACCGAGACCCAGAGCCCCACTTACAAGAGTTACCTCACCTGACAACTCCGACAGTGACAACAGTCCGACGCCAAAACTACAAGAAGAGGACGCCGGCAATGTGCAGGATAAGAAAAAGAATGATACACTTAGGAAACTATTTTCAAGTGCCAAGGGCGGTGCGAAAGGTGGCGGTAAGGGCGGGAAAGGTGGGAAAGGTGGTGGCAAATGTGGAATTTACGTCGAAGAATACACTGCGAGTACGCCGACGGGCGGTGAAAGTCCATACAAAAGACCGTCGTCGCAATCTTCCGCTACAGCAAACTTCCCACCCTTGAAATATGTCAATGGAGTACCCATACTTGTGTGTAAAGTCGATCTTAGCCGACTTTCTCATGTCCCACGGCCGTCGCGAGGTCAAGAATTGAGACAGCGAACAGAATTACCGGACACAAGGCCGGCTTCCCGACAATCTGCCAAATCCGAGCGACCGCCTACGCCGGAGGAGGGTGAAATTATCGATACCCCTACACCACCACCGTCCATCGACTTCAGGACACACGTTGATAATCATCACGCCACGACTGATCAAGCTGTGTTATCAAAAAGTAAACGTACTGAGAGTAAGAGTGAATTAGTAGTAACTTTAGCTGGGGCGGATTCGAAAAATCGCGCGATACCTGGTGGCAGTGGATTATCTAGTGGCCCTACGAACTCCAGTGCCGGTGCTAGTGCTAATGTTATCACAGATAATACTGGGGACCGAGTGCCGAAACGTAAGCGCAACGCCAGTTGCAGTTCTGTATCTAGTTTAAATATGTGTTCAATGGACAGTAAAGTTAAATCCACAAGTGAGcacaaagaaaagaaaaaaagaaaacgacATCACACTGACAAAGACTCAAACTCATCCAGATCATCTTCCCGACaaCAAAATGACATCCAACCCACAAATCACGAGCGGGAAGAAAGATCTGACGTTAATTTGCTGCCTCCACCGGCGGCACCACCTCAACGCGTCTACTATTCTTACTTCAATCATCAAAATGACGTTTTGGAGGATCAGGATAGGGACCAGAACCAGTACCTGACGGAAGCTAAAAGATTAAAGCACAGTGCGGATGAGGAATGCGAACTGACGGCCCAGGGTATGCTGTACTTGGAGGCAGTATTGTATTTCCTTCTTACAGGCCACGCCATGGAGTCAGATCCAGTAACTGAAAGATCCTCTTTTACCATGTACAGAGACACACTTAGTCTTATAAAATACATCTCATCAAAGTTCAAGAGCCAACAGAACAATTCACCTGAGAGCAGTATCCATAACAAGTTGGCTATCTTGAGTTTATGGTGCCAgtctcttatttatttaaaactctaCAAAATGCGGCAACACGAAGTTAAGGAGAACGCTAAAATTCTCGCAGAGTACACGCAAAAAGTGAGCAcgCCTGCACAACCGACACTCGTGCATGCTGAAGGCCAAGGAACTCCATCGTTGTCTCCAACACCATCGCCGGCAGGTTCGGTTGGTTCCGTTGGTAGCCAGAGTTCCGGATACAGCAGCGGTGAGCTCGCGAATCGCGGTAACGTCGTCTCAGGACAGCCCTCAGCTTCGACTTTTGTCAGCGTTCCGCTTGCGATTCACTCGATGCTGGTAAAGCAGAATCAACATTTCTCATTATTAACTAATTGTCACGATTTGTGGGATCAGGCGACCCTATTAGTTACGGACAAACATCgagattttttcattgaattagACGAAAAACTTGGTCCGCTGACATTAAGAAGTTCATTACGGGACTTGGTGCGTTACGTACAAGCTGGAATTAAGAAGTTAAGAGCTCTCTGA
Protein Sequence
MPSSGGYYDDRNPLLKGTMSSVDRDRLRERERQARAAMSVQAEQAAAAGGPENCHSHHNHGHHHHHANSHVSAAASLFRAPVKVNPDAHDRTTQQIQSKLGNYSLVKHLLDEPKRLIGIEGVPASPAPGSSSSTRLSSSTSCRSSPSSQEFKKPGGNGPRTSSSSSSSSSTTGSTSSHTSQRGGFIKPADGKPPYGGRGGYPGQPVKHGGSSNDHRSHGILPAKGPPPSIAGNANSTGNSGGLTSSGNCPPAPGNSGNLSRVHAAASRLPRLPLDNGVRHGSDPADLENILKEMTMPPIPLTAIAQTPRKELESKFTFNPVLAKLTEIPPEPIKPPQRERHGTTRLSADLERDLSLSEDSEDEGVKTSISRVPRSTASPSINADHSTPLAPAMTPVPAPLAPMSPRALSPLVTLSPPRPISPLRTPPKHTVSERLLSPSSSSPRKGSPIMPMRPPSPPGQAPLSSGSASSSSDSGSDSGTDSSDDSEDENAPLPPKGPSTPPSVSPKVPVEDPPPAEESKPRWNLSSFFNKTAVQAGDKNSENKTAQNEAARRDSSPEEASLDMRIRRSDGAHHNNEWQLDEALKRTRNATMLTVLSDGDQNSDSEKKKKEESRSQIQDKPKAPDVRKRGRPRKTAKETVKSPRSHRMSSEESKASSKRSKPRSASNPKKKTTAIPLPRVPLDNSDELSDSRSRDRSSDSECEQSRISPASTVIPVDKRRSRLSISSSEDEKTTNKHSASEDDARWRRLSSKRNKLTDSPTKKQDKKKSPNKVKPQRPRSRITNNSGCASDSDSELETTLRNNRVQPVARVPPRPRAPLTRVTSPDNSDSDNSPTPKLQEEDAGNVQDKKKNDTLRKLFSSAKGGAKGGGKGGKGGKGGGKCGIYVEEYTASTPTGGESPYKRPSSQSSATANFPPLKYVNGVPILVCKVDLSRLSHVPRPSRGQELRQRTELPDTRPASRQSAKSERPPTPEEGEIIDTPTPPPSIDFRTHVDNHHATTDQAVLSKSKRTESKSELVVTLAGADSKNRAIPGGSGLSSGPTNSSAGASANVITDNTGDRVPKRKRNASCSSVSSLNMCSMDSKVKSTSEHKEKKKRKRHHTDKDSNSSRSSSRQQNDIQPTNHEREERSDVNLLPPPAAPPQRVYYSYFNHQNDVLEDQDRDQNQYLTEAKRLKHSADEECELTAQGMLYLEAVLYFLLTGHAMESDPVTERSSFTMYRDTLSLIKYISSKFKSQQNNSPESSIHNKLAILSLWCQSLIYLKLYKMRQHEVKENAKILAEYTQKVSTPAQPTLVHAEGQGTPSLSPTPSPAGSVGSVGSQSSGYSSGELANRGNVVSGQPSASTFVSVPLAIHSMLVKQNQHFSLLTNCHDLWDQATLLVTDKHRDFFIELDEKLGPLTLRSSLRDLVRYVQAGIKKLRAL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01006055;
90% Identity
iTF_01006055;
80% Identity
-