Basic Information

Gene Symbol
dmrta2_1
Assembly
GCA_963931805.1
Location
OZ007499.1:35180453-35233177[+]

Transcription Factor Domain

TF Family
DM
Domain
DM domain
PFAM
PF00751
TF Group
Zinc-Coordinating Group
Description
The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-19 5.1e-15 55.9 4.5 14 47 69 102 55 102 0.92

Sequence Information

Coding Sequence
ATGGGGCGGGTTCCAGTGCCTACAAAAAATGTGGACTTCAACGCCATTGAGAATGCAGTCCGTTTGTTCTCCGGCgacgacaattatagcattcTTAAGTGGGTAGCAGATTACGAGGATTACGAGGATTTGTCCCAGTCGCTTTGTTGCAATGATACCACCAAATACCTCTGTGCACGTCGAATTTTGACAGGAACTGCCAAGGTTAGCGCTCTAAAAGGACACAAAAGATATTGTAGATGGCGTGATTGTGTTTGTGCGAAATGTACCCTGATTGCGGAACGTCAACGAGTCATGGCAGCTCAGGTGGCACTACGACGACAACAGGCGCAAGAGGAGAACGAAGCAAGAGAGCTAGGATTATTGTATTCGACAGTACCAAGTGCTCAGTCAAATGGTAATAATCCTGGTGCAAGTTCCGGTCCAGAAACTGGTATTCAAGCTACACCTCAAGGTGTTTTCCATTCTGGAATCCCATCGCCCCCCAGTGATATGGACTCCAATCAACGGATACAGTTCAATGGAAGTGAACCAGATTCAGATCGGTTACGTTCCGATAGACTGTCTATGGGCTATTCACCCGATCGAACGGACGTCGACAGTCCTGGATCCAAACGCGCCCGTCTATCGAATGAGACCGATCAAGATACAGGCTCAGAATCATCGCCAGGCAGTCCACGTCACAAGAATCAGATTTACCAACATTCGGCTAATCTATCACCAACACGTACAGGACCTCCAAGTTCTCCAGAATCTGATTTGGATGTTGATTCAGCTCCCGATGAGGCAACCCCAGAGAATCTTAGCTTAAAAAAAGACGATTCCACATCACCACCATCGACTCCATCAGATAGTTTACACATCCTGCGGAGTTTTAGTAGTAGTAGTCAAGGTTTCATTCCGTATCATCATCACTCACAGTTCATGCCGACATCTATGCCTAGTCATCCAGCACAGCAACAGCAGCATCAGCAACGTTCTCCTGTTGATGTTCTGTTGCGGGTATTCCCCAACAGACGGCGCAGTGAAGTCGAACAGTTATTACAACGATATCGCGGTGATGTTTTACAAGCAATGGAGGCAATATTATCCGGGGAGGATATGGGCAATATGCCACCGACACCCCCGTTTCCAATCAAATCAGCCTTCTCACCGTTGGTACCACCAGGAGTTTTTGGATCAACTAATCGATATCCTTTTATGCAAGCGCACGCCAAAAGATTCTTGACTGCGTCTTATACGGGGACGGGATATTTACCTGGAGTTTTACCACCCGATGTTGATCAATCAGAGTCGAACAGTGGTGCCGCGGATAGAAATAGTAACACTGGAGACTCACAGGATTAA
Protein Sequence
MGRVPVPTKNVDFNAIENAVRLFSGDDNYSILKWVADYEDYEDLSQSLCCNDTTKYLCARRILTGTAKVSALKGHKRYCRWRDCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYSTVPSAQSNGNNPGASSGPETGIQATPQGVFHSGIPSPPSDMDSNQRIQFNGSEPDSDRLRSDRLSMGYSPDRTDVDSPGSKRARLSNETDQDTGSESSPGSPRHKNQIYQHSANLSPTRTGPPSSPESDLDVDSAPDEATPENLSLKKDDSTSPPSTPSDSLHILRSFSSSSQGFIPYHHHSQFMPTSMPSHPAQQQQHQQRSPVDVLLRVFPNRRRSEVEQLLQRYRGDVLQAMEAILSGEDMGNMPPTPPFPIKSAFSPLVPPGVFGSTNRYPFMQAHAKRFLTASYTGTGYLPGVLPPDVDQSESNSGAADRNSNTGDSQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00991829;
90% Identity
-
80% Identity
-