Mhyp000654.1
Basic Information
- Insect
- Microctonus hyperodae
- Gene Symbol
- ZFX
- Assembly
- GCA_030347285.1
- Location
- JAQQBR010000001.1:6307364-6311911[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.2 84 3.6 0.1 3 23 15 35 14 35 0.94 2 15 3 2.2e+02 2.3 2.3 1 23 975 998 975 998 0.80 3 15 0.0014 0.1 12.8 0.4 2 23 1085 1107 1084 1107 0.95 4 15 0.0021 0.15 12.3 0.1 2 23 1120 1141 1119 1141 0.97 5 15 1.4e-05 0.001 19.1 3.1 2 23 1144 1165 1143 1165 0.97 6 15 0.0016 0.12 12.6 0.3 1 23 1171 1193 1171 1193 0.97 7 15 2.3e-05 0.0017 18.4 4.5 2 23 1200 1221 1199 1222 0.95 8 15 0.1 7.3 7.0 3.7 5 23 1235 1253 1234 1253 0.97 9 15 1.6e-05 0.0012 18.9 1.5 3 23 1260 1281 1259 1281 0.97 10 15 0.033 2.4 8.5 0.2 2 23 1297 1317 1296 1317 0.96 11 15 6.2e-05 0.0045 17.1 0.7 1 20 1323 1342 1323 1345 0.92 12 15 7.7e-05 0.0056 16.8 2.7 1 23 1353 1375 1353 1375 0.99 13 15 0.0022 0.16 12.2 3.2 1 23 1381 1403 1381 1403 0.97 14 15 3.7e-05 0.0027 17.8 6.8 1 23 1409 1431 1409 1431 0.98 15 15 0.00028 0.02 15.0 7.2 1 23 1437 1459 1437 1460 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTCGGCGTCACAGCAGAGACCGGTGGGGCGGTTGCTTGTCCGGTCTGTACACTTTACCTCAGAGAAGGTATTAGCCTTCAACGGCACCTGGACACTCATCCAAAGGAACAGGTTATTGAGGCGTTGATCAAGGCCAGTGGGTCTTCTTCAGGCTCCTCACTTCAGCAGTTACCACAGTCCCAGGTGTCCCAAGTGCCTCAGGTAACGCAGACTATTCACTCAAcgccaccaccgccaccattACCACCACCATTACCGCCACCACCGCCGCCATCATCAACACAACAGACGCAGCAGGTCAATGGCCAAGGTACATCAGCTGCTTCTGCTCACATTCCTGCTCAATCCCCCTATCCAATTGGACCTGTCTTTGAGTGTCCACCAATAAACGCTATGATGCCACCACAATTTGCCTCATTCAGTTATCAACAATTTGTTAACAACGGTACGATGATGATTCCTCAATATGCAATGGCACCACCGCAAGCCAATCAAATGATGCAAATGTTATACAATCCATACAGTATGTATCAACAGCAACAGGTCCCAACTGTGCAAATGATTTCACCAGTTTCGACAATGCCACCGACAAGAATTCGGCCAGTTGTCGCTGTATCAAACGGCGATACTAATACACGAAATGTCATCATAACTGCTAACACTAATGAGCCTAAACAAATATTACCGGAAATAATGGATGAGTCAGATTTGGAGCGAATTATGCCTAATATCGAATCATCTACAAGTCCAAATCAATCAACAGAAATGACAACAGATGTGCGACATGATAATGTTGAGAGTAATGCAAGGCAAATGGAACATCGAGATCAACAAACTCAGAGTACATCACCAAGGCGAATAGATTCgggtgaaattattaaaaatgctaCAATGCCAATGGTTTGTCAATCATCCACTACTGCTGATGAAGAAAAGTCAAAAAGTATATTACCGAACATGGACGAATTAAACACCGAGGAATCGACAACACAATGTCGAGtagaacaaaattttcaacaacagcagcagcagcaaccaTCAAAACAACACCATAGATATTCTCCTATTTATGAGGACGAAACCAACGAACAGAATAATACTAATATGAATGAACGGTTGAGTCACGATTCTATGAGTGAAGATAAGGTGAATGTTTCAGAtacaagaattaaaaaaagtgaGTCTACTAATGAATCAATACAATCGCAACCAAGTTCAGTGAcgattttatcatcatcatcatcatcatcatcatcaacaccaACATTATCGACAATAACAACATCTACAACAATAGAAACAACAGCACCAGCAACAACAGTAGCAACTGAGTCAACTCAACAACATAGTGAAGTTGAGCATCTTGAACAAATTCTTATATCAATGATTGAAACGGGTTATGTGCAAAACAACGAAGTGTCCACGAAAACGACAGATGAACACAACTATAAATCAGTGCCTAGTCCAAAAGCTATAGCAATCCAATCGGAAGATGTGAgctatgaagaaaataataaggacatagataattattatgaaaatattaataattctaagcCATGTATTGATGATAACAATAAGATAGATGAGACGATTGTCATTGAAGATAgtgatattgattatttatatcggTATAAACATAGTTCATCAGCGCCAGCATCACCATCAGTCTCAAAAACTAATCGACAACATTGTTCTTATCCAACGAGATCTGGATACGGTTCAATTGACAATATTAATTCGTATCCAGTTGGTTTCGAGGCTACAACATTACATGCAGacgttgatgatgatgaggacgATGAAGATGAGGATGATGAGGATGACGAAGAGGATGACGATGAGGATgacgaagataaaaatattattgataattttgatgaagAAGATATGGAAATCGAAGAATTAGGAAGTCCACATACGCCATTTACCAAACACGATGATGGTTTGGATAATGGACGACACACGTCATTGTCACATATTAGTGGCATTTCTGGTCTTCGTGTACGGTCTGATTTGAGTAAACCAAGTTCTCCTGTATCAATGCATTCATTTAGTAATATAGATGCCGACAGTCACgatgataatagtaatgattTCGATAATAATtgcgaaaaaaattcattgaattcttCTCAAATCGATCAGAATGCAAGGTCAAActgtgaaataattgaagaagtAATTGACACTGAAAGATTATCTGATTCTACTAGTGgtaattatcatcaatcaGTTATTACTGAGCATATAAGCTCATTTCCAACAATTCATTCACAACAACAGTCAATAgttcatgataattattcaatatcaagtaataataaagtaatgaCTGATAATCCATTAGATATTAGTGGTTTATCGCATACAGGTCCAACAACTAGTGCCGAATCTAAAAGTTTTCAATCAACAACAACCAAGTCCATAAGTCATATACCAACAACAgaacttttaaatattaatgaggaTGCACACTCGGGCCCAATGAATGTATTTGAATTTGATGGTCTTCAAATATTAGTTCCTAGCACATTTATTAGTGATTCGTCACAAAAAGCAATAAGTGCAACGAGTCAACAATCAATGGCAAGCAGCGAAGGGGGTGCCGGCATTGATGAGGAGGTTAAGAGTGTTAATATGCGGGCGGACGAAACGATGCCACCGAGGGGCGAATTATCCGAACAAGAGAGCAATGGCTGCACTGAACATTCGGCGTGGCAgCTATATGTTGGACAAGAGTCATCGCGCATGTCAACGTCTTACGATCTGATGGCACGAGAAAGTTGGGAGGAATCTGAGGGTTCTGATAATGAAACTGGTGTACCACTATTGGACAGTCGTTCACTCGCTACTCACTTTACATCTAGCTTATTTCTTGATCGTGACAGAAAGACACCGACCAAACAGCGAATGTTCAAGTGCTCACAGTGTACAGAGGTGTTTGATTGTCCAAAGGAACGTCGTGTTCATAGCACAACTGTTCATAAAGAAGCGGGTCCGAGCAATAGTAGCAGTAATAGCGGTCTCATTGAACAATCCGAAacaaaagatattaaattacttGATGGACGTATGAATCcatttgaagatatttttgtGCCGGGTCTTCATGTACAACAAACTTATCAACAGCAACAGCCGCTGTTGCATCAAATGCAACCACCTCAGCAGCCTGGCGATGCCAATAAAGTTGATACAGATGAAAAAACGGACGGTTTATCTGTGTCACAAGGTATGGATATACCGTGCGCAATGTGTAATCAACGATTTAGCTCTGAGCGATCATTGCAAATGCACAATAGACGTGTTCATGGCACTGAAGTTGCACGACGTCTTCATGATATCTCAAAGTGTCAAATATGTAATGAAGAATTTCCATCGGTTGTCTTATTTAAtgcacatttaaaaattcatccgCTTGAGTGCTCGCAGTGcggcaaatatttttatcgtaaacaaaattttaaattacatatgaAACGTCATCTTGGAATAAAACCATTCCCGTGTACAGTTTGTGACAAGGCATTTTtaactaaacaaaaattagATGAACATATGAATGGACATACGGGCAATGCACCAGTAAAGTGTAATCTCTGCAATGAAACATTCCGCagatattcaaatttaacgCAACATAAAAATCGtcatcatttgaatattaaacgTAAATTAAAAGATTATATATGTCATTGTGGCGAAGTGTTTCATACAAAAAAGAAGCTTGCATGGCATAAAGAAACTCATGATGAAAAACCTAAAGCATGTACTTATTGCAATGAAAGATTTGTTCATATGGCCAGTTTAACACGTCATATGAGACGGGCACATAATCGTCGTTTTGTGCCTGATGCTCAacgtgaaaatgaaaatgtcgAGTGTCCAATTTGTCATGGCATTTATTTACGCTCATCGCTATCAGTTCACATGCGCGTGCACAGTGAGGAACGTCCTTATGAGTGTCAGGTGTGTTCAAAAGCATTCAGTACCAAATGGAATCTTCAATTACATAAATGGACCCATGCCGCACGCAGCACCAAGCCCTTTAAGTGTAATCAGTGTAGCGCAGCATTTTATCGTCACAGCGACTACACAGCTCACATGAATTCACATAGAAATGTCCGGCCGTATACATGCAATTATTGTGGCGCTCAATTTATAAGAAAGTACAATTGTTTGCGACATGTTAAAGAACACGAAGAGAAAAAGGCGCACACGTGTAAAGTATGTAATAAGACATTTCATCGTTCGTATTATCTCACTGAACATCAGCGTGTCCATAGTGGTGCACGACCGTACACATGTCACATATGTGGTAAATCAAGTAGCACCAAATCCAATCACAATAAACACGTGAGAATTCATCATGCACGTGAGCCTGTAAATaccgaaaattaa
- Protein Sequence
- MEVGVTAETGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASGSSSGSSLQQLPQSQVSQVPQVTQTIHSTPPPPPLPPPLPPPPPPSSTQQTQQVNGQGTSAASAHIPAQSPYPIGPVFECPPINAMMPPQFASFSYQQFVNNGTMMIPQYAMAPPQANQMMQMLYNPYSMYQQQQVPTVQMISPVSTMPPTRIRPVVAVSNGDTNTRNVIITANTNEPKQILPEIMDESDLERIMPNIESSTSPNQSTEMTTDVRHDNVESNARQMEHRDQQTQSTSPRRIDSGEIIKNATMPMVCQSSTTADEEKSKSILPNMDELNTEESTTQCRVEQNFQQQQQQQPSKQHHRYSPIYEDETNEQNNTNMNERLSHDSMSEDKVNVSDTRIKKSESTNESIQSQPSSVTILSSSSSSSSSTPTLSTITTSTTIETTAPATTVATESTQQHSEVEHLEQILISMIETGYVQNNEVSTKTTDEHNYKSVPSPKAIAIQSEDVSYEENNKDIDNYYENINNSKPCIDDNNKIDETIVIEDSDIDYLYRYKHSSSAPASPSVSKTNRQHCSYPTRSGYGSIDNINSYPVGFEATTLHADVDDDEDDEDEDDEDDEEDDDEDDEDKNIIDNFDEEDMEIEELGSPHTPFTKHDDGLDNGRHTSLSHISGISGLRVRSDLSKPSSPVSMHSFSNIDADSHDDNSNDFDNNCEKNSLNSSQIDQNARSNCEIIEEVIDTERLSDSTSGNYHQSVITEHISSFPTIHSQQQSIVHDNYSISSNNKVMTDNPLDISGLSHTGPTTSAESKSFQSTTTKSISHIPTTELLNINEDAHSGPMNVFEFDGLQILVPSTFISDSSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLMARESWEESEGSDNETGVPLLDSRSLATHFTSSLFLDRDRKTPTKQRMFKCSQCTEVFDCPKERRVHSTTVHKEAGPSNSSSNSGLIEQSETKDIKLLDGRMNPFEDIFVPGLHVQQTYQQQQPLLHQMQPPQQPGDANKVDTDEKTDGLSVSQGMDIPCAMCNQRFSSERSLQMHNRRVHGTEVARRLHDISKCQICNEEFPSVVLFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFVHMASLTRHMRRAHNRRFVPDAQRENENVECPICHGIYLRSSLSVHMRVHSEERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEEKKAHTCKVCNKTFHRSYYLTEHQRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01560643;
- 90% Identity
- iTF_01000774; iTF_01001594;
- 80% Identity
- -