Maet008610.1
Basic Information
- Insect
- Microctonus aethiopoides
- Gene Symbol
- ZFX
- Assembly
- GCA_030347275.1
- Location
- JAQQBS010001422.1:7168971-7173544[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.1 1e+02 3.6 0.1 3 23 15 35 14 35 0.94 2 15 2.9 2.6e+02 2.3 2.3 1 23 986 1009 986 1009 0.80 3 15 0.0014 0.13 12.7 0.4 2 23 1097 1119 1096 1119 0.95 4 15 0.002 0.18 12.3 0.1 2 23 1132 1153 1131 1153 0.97 5 15 1.4e-05 0.0012 19.1 3.1 2 23 1156 1177 1155 1177 0.97 6 15 0.0016 0.14 12.6 0.3 1 23 1183 1205 1183 1205 0.97 7 15 2.2e-05 0.002 18.4 4.5 2 23 1212 1233 1211 1234 0.95 8 15 0.099 8.9 6.9 3.7 5 23 1247 1265 1246 1265 0.97 9 15 1.6e-05 0.0014 18.9 1.5 3 23 1272 1293 1271 1293 0.97 10 15 0.032 2.9 8.5 0.2 2 23 1309 1329 1308 1329 0.96 11 15 6e-05 0.0054 17.0 0.7 1 20 1335 1354 1335 1357 0.92 12 15 7.5e-05 0.0068 16.8 2.7 1 23 1365 1387 1365 1387 0.99 13 15 0.0021 0.19 12.2 3.2 1 23 1393 1415 1393 1415 0.97 14 15 3.6e-05 0.0033 17.7 6.8 1 23 1421 1443 1421 1443 0.98 15 15 0.00027 0.025 15.0 7.2 1 23 1449 1471 1449 1472 0.96
Sequence Information
- Coding Sequence
- ATGGAAGTCGGCGTCACAGCAGAGACCGGTGGGGCGGTTGCTTGTCCGGTCTGTACTCTTTACCTCAGAGAAGGTATTAGCCTTCAACGGCACCTGGACACTCATCCAAAAGAACAGGTTATTGAGGCGTTGATCAAGGCCAGTGGGTCTTCTTCAAGCTCCTCACTTCAGCAGTTACCACAGTCCCAGGTGTCCCAAGTGCCTCAGGTAACGCAGACTATTCACTCAAcgccaccaccgccaccattACCACCACcattaccaccaccaccgccgccATCATCAACACAACAGACGCAGCAGGTCAATGGCCAAGGTACATCAGCTGCTTCTGCACACATTCCTGCTCAATCCCCCTATCCAATTGGACCTGTCTTTGAGTGCCCACCTATAAACGCTATGATGCCACCACAATTTGCCTCATTCAGTTATCAACAATTTGTTAACAATGGTACAATGATGATTCCTCAATATGCAATGGCACCACCGCAAGCCAATCAAATGATGCAAATGTTGTACAATCCATATAGTATGTATCAACAGCAACAGGTCCCAACTGTGCAAATGATTTCACCAGTTTCAACAATGCCACCGACAAGAATTCGGCCAGTTGTCGCTGTATCAAATGGCGATACTAATACACGAAATGTCATCATAACTACTAACACCAATGAGCCTAAACAAATATTACCCGAAATGATGGATGAGTCAGATTTGGAGCGAATTATGCCTAATATTGATTCATCCACAAGTCCAAATCAATCAACAGAAACGACAACAGATGTGCGACATGATAATGTTGAGAGTAATGCAAGGCAAATGGAACATCGAGATCAACAAACTCAGAGTACATCACCAAGACGATTAGATTCGGGtgagattattaaaaatgctACAGTGCCAATGATTTGTCAATCATCCACTACTGCTGATGAAGGAAAGCCAGAAAGTATAGTACCGGACATGGCCGAACAAGACACCGATGAATCGACAATACAATGCAGAGACGAACAACATtttcaacagcagcagcagcagcaacaacaacaacaacaacaccagcagcaacaacagcaaccgTCAAGACAACACCATAGATATTCTCCTATTTATGAGGACGAAACaaacgaagaaaataatacCAACGTGAATAAACGATTGAGTCACGATTCTATGGATGAAGATAAGGTGAATATTTCAGATAcaagaatagaaaaaagtgATTCTACTAATGAATCAATACAATCGCAACCAAGTTCAGTGGcgattttatcatcatcatcaacatcaacacCAACATCACCagcaataacaacaacaacaactgcAACAATAGAAGCAACTGCACCAGTAACAATAGCAGCAACTGAGTCAACTCAACGTAGTGAAGTTGAGCATCTTGAACAAATTCTTATATCAATGATTGAAACGGGTTATGTGCAAAACAACGAAGTGTCCACGAAAACGACAGATGAACACAACAATAAATCAGTGCCTAGTCCAAAAGCTATAGCAATCCAATCGGAAGATGTGAGCtatcaagaaaataataaggacatagataattattatgaaaatattaataattctaagaCATGTATTGATGATGACAGTAAGATAGATGAGACAATTGTCATTGAAGATAgtgatattgattatttatatcggTATAAACATAGTTCATCAGCGCCAGCATCACCATCAGTCTCAAAAACTAATCGACAACATTGTGCTTATCCAACGAGATCTGGATACGGTTCAATTGACAATATTAATTCGTATCCAGTTGGTTTTGAGGCTACAACATTACATGcagatgttgatgatgatgaggacgATGAAGATGAggatgatgaggatgatgaaGAGGATGACGATGAGGATgacgatgataaaaatattattgataattttgacGAAGAAGATATGGAAATTGAAGAATTAGGAAGTCCACATACGCCATTTACCAAACACGACGATGATTTGGATAATGGACGATCACACACGTCATTGTCACATATTAGTGGCATTTCTGGTCTTCGTGTACGATCTGATTTAAGTAAACCAAGTTCTCCTGTATCAATGCATTCATTTAGTAATATAGATGCAGACAGTCACGATGATAATAGCaatgattttgataataatcgtgaaaaaaattcattgaattgttCTCAAATTGATCAAAGTGCAAGGTCAAATTATGAAATACTTGAAGAAGTAATTGACACTGAAAGATTATCTGATTCTACCAGTGGGAATTATCATCAATCAGTTATTACTGAGCATATAAGCTCATTTCCAACAATTCATTCACAACAGCAGTCAATAGttcatgataattattcaatatcaagtaataataaagtaataactGATAATCCATTAGATATTAGTGGTTTATCGCACACAGGTCCAACAACTAGCGCCGAGTCTAAAAGTTTTCAATCAACAACAACCAAGTCCATAAGTCATATACCAACAACAGAActcttaaatattaatgaggATGCACACTCGGGCCCAATGAatgtatttgaatttgatGGTCTTCAAATATTAGTTCCTAGCACATTTATTAGTGATTCGTCACAAAAAGCGATAAGTGCAACGAGCCAACAATCAATGGCAAGCAGCGAAGGGGGTGCCGGCATTGATGAGGAGGTTAAGAGTGTTAATATGCGGGCGGACGAAACGATGCCACCGAGGGGCGAATTATCCGAACAAGAGAGCAATGGCTGCACTGAACATTCGGCGTGGCAGCTATATGTTGGACAAGAGTCATCGCGCATGTCAACGTCTTACGATCTGATGGCACGAGAAAGTTGGGAGGAATCTGAGGGTTCTGATAATGAAACTGGTGTACCACTATTGGACAGTCGTTCACTCGCTACTCATTTTACATCTAGCCTATTTCTCGATCGTGACAGAAAGACACCGACCAAACAACGAACGTTCAAGTGCTCACAGTGTACAGAGGTGTTTGATTGTCCGAAGGAACGTCGTGTTCATAGCACAACTGTTCATAAAGAAGCGGGTCCGAGCAATAGTAGCAGTAATAGCGGTCTTATTGAACAATCCGCCGAAACGaaagatattaaattacttGATGGGCGTATGAATCcatttgaagatatttttgttCCGGGCCTTCATGTACAACAAACttatcaacaacaacagccACTTTTACATCAAATGCAACCACCTCAGCAGCCTGGTGATGCCAATAAAGTTGATACAGATGAAAAAACGGATGGTTTATCTGTGTCACAAGGTATGGATATACCATGCGCAATGTGTAATCAACGATTTAGCTCTGAGCGATCATTGCAAATGCACAATAGACGTGTTCATGGCACTGAAGTTGCACGACGTCTTCATGATATCTCAAAGTGTCAAATATGTAATGAAGAATTTCCATCGGTTGTGTTATTTAATgctcatttaaaaattcatccaCTTGAGTGCTCGCAGTGtggcaaatatttttatcgtaaacaaaattttaaattacatatGAAACGTCATCTTGGAATAAAACCATTCCCGTGTACAGTTTGTGACAAGGCATttttaacaaaacaaaaattagacGAGCATATGAATGGACATACGGGCAATGCACCAGTAAAGTGTAATCTCTGCAATGAAACATTCCGgagatattcaaatttaacgCAACATAAAAATCGtcatcatttgaatattaaacgtAAATTAAAAGATTATATATGTCATTGTGGCGAAGTGtttcatacaaaaaagaaGCTTGCATGGCATAAAGAGACTCACGATGAGAAACCTAAAGCATGTACTTATTGCAACGAAAGATTTGTTCACATGGCCAGTTTGACACGTCATATGAGACGAGCACATAATCGTCGTTTTGTGCCTGATGCTCAacgtgaaaatgaaaatgtcgAGTGTCCAATTTGTCATGGCATTTATTTACGCTCATCGCTATCAGTTCACATGCGCGTACACAGTGAGGAACGTCCTTATGAGTGTCAGGTGTGTTCAAAAGCATTCAGTACCAAATGGAATCTTCAATTACATAAATGGACCCATGCCGCACGCAGCACCAAGCCCTTTAAGTGTAATCAGTGTAGCGCAGCATTTTATCGTCACAGCGACTACACAGCTCACATGAATTCACATAGAAATGTCCGGCCGTATACATGCAATTATTGTGGCGCTCAATTTATAAGAAAGTACAATTGTTTACGACATGTTAAAGAACACGAAGAGAAAAAGGCGCACACGTGTAAAGTatgtaataaaacatttcatcGTTCATATTATCTTACTGAACATCAGCGTGTTCATAGTGGTGCACGACCGTACACATGTCACATATGCGGTAAATCAAGTAGCACCAAATCCAATCACAATAAACACGTGAGAATTCATCATGCACGTGAGCCTGTAAATaccgaaaattaa
- Protein Sequence
- MEVGVTAETGGAVACPVCTLYLREGISLQRHLDTHPKEQVIEALIKASGSSSSSSLQQLPQSQVSQVPQVTQTIHSTPPPPPLPPPLPPPPPPSSTQQTQQVNGQGTSAASAHIPAQSPYPIGPVFECPPINAMMPPQFASFSYQQFVNNGTMMIPQYAMAPPQANQMMQMLYNPYSMYQQQQVPTVQMISPVSTMPPTRIRPVVAVSNGDTNTRNVIITTNTNEPKQILPEMMDESDLERIMPNIDSSTSPNQSTETTTDVRHDNVESNARQMEHRDQQTQSTSPRRLDSGEIIKNATVPMICQSSTTADEGKPESIVPDMAEQDTDESTIQCRDEQHFQQQQQQQQQQQQHQQQQQQPSRQHHRYSPIYEDETNEENNTNVNKRLSHDSMDEDKVNISDTRIEKSDSTNESIQSQPSSVAILSSSSTSTPTSPAITTTTTATIEATAPVTIAATESTQRSEVEHLEQILISMIETGYVQNNEVSTKTTDEHNNKSVPSPKAIAIQSEDVSYQENNKDIDNYYENINNSKTCIDDDSKIDETIVIEDSDIDYLYRYKHSSSAPASPSVSKTNRQHCAYPTRSGYGSIDNINSYPVGFEATTLHADVDDDEDDEDEDDEDDEEDDDEDDDDKNIIDNFDEEDMEIEELGSPHTPFTKHDDDLDNGRSHTSLSHISGISGLRVRSDLSKPSSPVSMHSFSNIDADSHDDNSNDFDNNREKNSLNCSQIDQSARSNYEILEEVIDTERLSDSTSGNYHQSVITEHISSFPTIHSQQQSIVHDNYSISSNNKVITDNPLDISGLSHTGPTTSAESKSFQSTTTKSISHIPTTELLNINEDAHSGPMNVFEFDGLQILVPSTFISDSSQKAISATSQQSMASSEGGAGIDEEVKSVNMRADETMPPRGELSEQESNGCTEHSAWQLYVGQESSRMSTSYDLMARESWEESEGSDNETGVPLLDSRSLATHFTSSLFLDRDRKTPTKQRTFKCSQCTEVFDCPKERRVHSTTVHKEAGPSNSSSNSGLIEQSAETKDIKLLDGRMNPFEDIFVPGLHVQQTYQQQQPLLHQMQPPQQPGDANKVDTDEKTDGLSVSQGMDIPCAMCNQRFSSERSLQMHNRRVHGTEVARRLHDISKCQICNEEFPSVVLFNAHLKIHPLECSQCGKYFYRKQNFKLHMKRHLGIKPFPCTVCDKAFLTKQKLDEHMNGHTGNAPVKCNLCNETFRRYSNLTQHKNRHHLNIKRKLKDYICHCGEVFHTKKKLAWHKETHDEKPKACTYCNERFVHMASLTRHMRRAHNRRFVPDAQRENENVECPICHGIYLRSSLSVHMRVHSEERPYECQVCSKAFSTKWNLQLHKWTHAARSTKPFKCNQCSAAFYRHSDYTAHMNSHRNVRPYTCNYCGAQFIRKYNCLRHVKEHEEKKAHTCKVCNKTFHRSYYLTEHQRVHSGARPYTCHICGKSSSTKSNHNKHVRIHHAREPVNTEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01560643;
- 90% Identity
- iTF_01002285;
- 80% Identity
- -