Mbra001975.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Microctonus brassicae
Gene Symbol
egg
Assembly
GCA_940306215.1
Location
OW675802.1:925144-928938[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.3e-13 2.9e-09 36.6 0.0 5 70 681 740 678 745 0.85

Sequence Information

Coding Sequence
atgtcaacGAAGAAACCTATGGAAATCATTGAGCTAGACTGTGAGGAGGACATGTCTACtcaaaaatccaaaaatgCTGATAGGAATAGCAAGAAAATCATGAGCACttgtataaatttcaaatgcaTCTCTGGAATAGATATGAAAAAAGCACCAAGTTTTGCTTGTGCTTATTACGGTGTGAATTcagttaagaaaaaaaaacgatttatatgtcaaaaatgttttaatgCTGCAATTGAACATCAAGAAATGTTGGCGAGTGCCCTATTTCGTAAAGAACctttattaaattgtgaatttcCTGATCATACTATGGAAGTAGAAATTTCAGATAGTGatgattcaaatgaaaatacaaaagatGAATCTCATTCAgatgatgaatatatacctGAAGATGTTATTATGAGTATTGGTGAAAATATGGATGATGctttgtcaaatatttttaagcaACACGACATCAATTATCAGGTGGAAGAAGCCCATAAAATTCTTAAATCACAATGGGATAGTATTGATAattcaaatacaaatttgGATCGTGATATTAAAATCATGATAGCTAAAATGGAttcaataagaaataaattgtatgatGAATTTAAGCCTGATATTAGAAATTTACGTGAATTACATATTGATGATAGTTCAGCGGAAAATACTGCTGTGCAACATCATTCTCTCGTAGCTACAAAAAAAGTAACGCAAGTACGTACACCGCCTGCTATAAAAGTGCCTGATAATCAAGTTGAGGTCATGTCTGTTGAACAAAAAGATAAATCTAAAATGGAACATGGTTTACCGCCCCATGGTGCATTAATACGACGTGCTGCCGAAGTAGACAATTCTGTATTGGTAATGAAACATCCATTAATACCATGGAGAAGAGCAAAAGTACTTGCCATTATATCCAGAACACCAATGACTTATCGGGTTAAATATATGCTTAAACGTTACAATAATCAAACTAAAACTGTATTTGGAAAGCAACTAGCTATACATGAACAGTGTCCTGTTGTTATTCCAGTTGCTACAAGAGTCGTGGCACTCTTTAGTGATATAAAAACAAGCAATTATTACAGTGGAGTTATTGCAGAACCGCCAAaagcaacaaataaatatagatatttagtattttttgaTGATGGATATGCTCAATATGTAGcgcataaatttatatacgtcGTGAGCGAGAGTTCGCTACGAGTATGGGAGGATATACCTATTGAATCACGTgattttgttaaaaaatatttagaaactTATCCAGAACGTCCAATGGTAAAATTGCAACAGGGTCAAGTTGTTAAAACTGAATGGAATGGTAAATGGTGGATTGCAAGAGTGATACAAGTTGATGCAAGTTTAGTACAAATGCACTTTGATGCAGATGGACGAACAGAGTGGATTTATCGAGGTTCTGCAAGACTTGGACCTCTTTTCCTGGAACTTTTAAAAGCTAATGCTCGACAACAAGGCCATCATGCATCGATAAATACCCCTAGCCGCCATAGACTAACAGgcacattgaataaaaataatttaccataCGTCGAATATACATCAGCTAGCCTAGAGCAAGAGACAGCTTTGCCTGATCAAACCGGGCAATCTTATCAAATGCCAATTACTCGTGCAACTCATGCTTCATTAGCAAATGCTCTAGGAGATATTGCAAAATCCACAAGTCCCAATACTGTACAAGCATCTAGTGGTGGTACTCCAATAACTACCACTGCTATCACCACCAAAACATCAACAACAGTAACGTCAGCACAACCTACGacaactactactactactactactactacccCAACGCAAGTGCGTGCTGTTGCGAAAAAAAGCACTGCCAAACGACAGAGTACAAATGAAACTCCAAATTATGTAACGAGCGCCGAGTCAAAGCCTTCTCATAGCATTGTGTATTATCAAACacagaataaaatacaaacacgtaaatttattccacataaatgcaacaaaaattgtattaaaggAATATCATTCACACCGGACGATCTTAAAGGTTATTCGCCTCTATCGATTCCGTTGCTCTGCGGTTGGAATCGACAATTGTGTAAATAtcctaaaggaaaaaaagtgaCACTTTATCAAGCGCCCTGTGGCGTTAGACTACGTAATATGGAAGAagttcataattatttacgaGTCACAAATTGCACCATGTCCgttgatttatttgatttcgATTGTTGGGTTCATTGTTTAGCTGAATTTGTTTTAGATAAATGTTTTGTGAATATAAAGGATTTGAGTTATGGCGTTGAAAATGTACCGATTCCATGTGTTAATGAAATAGATCATGCATTACCAGATACCATAAGATATAGCACTGTTCGAGAACCTACTGAAGGAGTAAATCTTAATCTTGATCCTGAATTTTTGTGCTGCTGTGATTGCGAAGATGATTGTCAAGATAAATCTAAATGTCAATGTTGGCAATTAACAATGCAAGGCGCTACATTTGGTGGTAGAGTACCAAATCATGCAGTTGGATATGTTTATAAAAGACTACCAGAACCTGTTACCACCGGtatttatgaatgtaattCAAGATGTAAATGTTCAATTAAAACATGTCTCAATAGAGTTGTTCAACATCCGTTGAGTTTAAAGCTACAAGTATTTAAAACAGCACCTCGAGGTTGGGGTATACGATGCCTCAATGATATTCCAGTGGGTTCATTCATTTGCATTTATGCTGGTAGATTATTGACGGAACAGGGTGCGAATGAGGGAGGAAAAAATTATGGCGATGAATATTTAGCTGAATTGGATTATGTTGAAGTTGTTGAAGGAATAAAAGAAGGCTTTGAAGCTGAGGCGTTTGAACCTAATGATAATTTGGTTGAAGGACCGTTgcctaaagaaaaaaaatccgcTGATGAAGAGCGAAATGTTGctagaaaaaaaacaacaaatgattcagatgaagaatttaatatacaacaaTATAACAGTGAATATACCAGATTAAATTCGGACGTCGATGGATCGATGAAAAGACGCTTGAGAAAGCGCAAGAAAAGCGAAGACATGGGTGGACCAGATTTATTGGAAGATAAAAGTGAAGATGGTAGCATGGGAAAAGATTCAAATGATAAAGGATCGGGCGATCAAGATGGTAGCGATGAAGACGACAAAGATGATAAGGATGATAAAGGAAATGGCAGACGAGAACCCAGTCGATTTGAACCAACTGTTGAACCTTCTCACGTcgaacaatttaaatttaaatctgtGCGTGATTTCTTTGGAGAAGATGAAGCTGTTTACATTATGGATGCAAAAACTACAGGAAATATTGGACGTTATTTGAATCATTCATGTGATCCTAATGTATTTGTCCAGAATGTTTTTGTGGATACACACGATGTTCGATTTCCATGGGTAGCATTTTTTGCTCTCAATTTCATACGAGCTGGACAGGAATTGACTTGGAATTATAGTTACGATGTAGGAAGTATCCCCGGTAAAGTTATTATTTGCAAGTGCGGAGCGTCCAATTGTCGTGGtcgattattataa
Protein Sequence
MSTKKPMEIIELDCEEDMSTQKSKNADRNSKKIMSTCINFKCISGIDMKKAPSFACAYYGVNSVKKKKRFICQKCFNAAIEHQEMLASALFRKEPLLNCEFPDHTMEVEISDSDDSNENTKDESHSDDEYIPEDVIMSIGENMDDALSNIFKQHDINYQVEEAHKILKSQWDSIDNSNTNLDRDIKIMIAKMDSIRNKLYDEFKPDIRNLRELHIDDSSAENTAVQHHSLVATKKVTQVRTPPAIKVPDNQVEVMSVEQKDKSKMEHGLPPHGALIRRAAEVDNSVLVMKHPLIPWRRAKVLAIISRTPMTYRVKYMLKRYNNQTKTVFGKQLAIHEQCPVVIPVATRVVALFSDIKTSNYYSGVIAEPPKATNKYRYLVFFDDGYAQYVAHKFIYVVSESSLRVWEDIPIESRDFVKKYLETYPERPMVKLQQGQVVKTEWNGKWWIARVIQVDASLVQMHFDADGRTEWIYRGSARLGPLFLELLKANARQQGHHASINTPSRHRLTGTLNKNNLPYVEYTSASLEQETALPDQTGQSYQMPITRATHASLANALGDIAKSTSPNTVQASSGGTPITTTAITTKTSTTVTSAQPTTTTTTTTTTTPTQVRAVAKKSTAKRQSTNETPNYVTSAESKPSHSIVYYQTQNKIQTRKFIPHKCNKNCIKGISFTPDDLKGYSPLSIPLLCGWNRQLCKYPKGKKVTLYQAPCGVRLRNMEEVHNYLRVTNCTMSVDLFDFDCWVHCLAEFVLDKCFVNIKDLSYGVENVPIPCVNEIDHALPDTIRYSTVREPTEGVNLNLDPEFLCCCDCEDDCQDKSKCQCWQLTMQGATFGGRVPNHAVGYVYKRLPEPVTTGIYECNSRCKCSIKTCLNRVVQHPLSLKLQVFKTAPRGWGIRCLNDIPVGSFICIYAGRLLTEQGANEGGKNYGDEYLAELDYVEVVEGIKEGFEAEAFEPNDNLVEGPLPKEKKSADEERNVARKKTTNDSDEEFNIQQYNSEYTRLNSDVDGSMKRRLRKRKKSEDMGGPDLLEDKSEDGSMGKDSNDKGSGDQDGSDEDDKDDKDDKGNGRREPSRFEPTVEPSHVEQFKFKSVRDFFGEDEAVYIMDAKTTGNIGRYLNHSCDPNVFVQNVFVDTHDVRFPWVAFFALNFIRAGQELTWNYSYDVGSIPGKVIICKCGASNCRGRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01000548; iTF_00997039; iTF_01560435; iTF_00996345; iTF_01002077; iTF_00451939;
90% Identity
iTF_01002077;
80% Identity
-