Mbra001958.1
Basic Information
- Insect
- Microctonus brassicae
- Gene Symbol
- -
- Assembly
- GCA_940306215.1
- Location
- OW675802.1:832752-839701[+]
Transcription Factor Domain
- TF Family
- AF-4
- Domain
- AF-4 domain
- PFAM
- PF05110
- TF Group
- Unclassified Structure
- Description
- This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental disabilities [1]. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.7e-08 0.0015 18.0 5.2 27 141 31 137 22 223 0.55 2 2 5.1e-08 0.001 18.6 1.1 328 381 220 272 210 293 0.76
Sequence Information
- Coding Sequence
- ATGTCGGTCCAAGCCGAGCATGCGGCAGCGGTCGGAGGTCCAGAAGCCTGTCATACTCATCataatcataataatcatGGGAATTCTCATGTGTCTGCAGCCGCATCACTTTTTCGCGCTCCTGTCAGAgTTAATCCTGATGCATATGATCGTACAACGCAACAAATTCAATCAAAGCTCGGCAATTACTCGCTGGTTAAGCATCTGCTAGAAGAGCCAAAGAGATTAATCGGAATTGAAGGGGTTCCAGCTAGTCCAGCGCCATCATCGGGATCATCTGTTAGATCTATATCATCGAACTCGAGTACAAGTTCAAGCGGTAGTTCATGCAGAAATTCTCCATCAACGCAAGAATTTAAAAAGCCGGGCTGTAGTGGTCCAAGATCATCAGGCACGTCTTCAAGTCATGGATCACAtagaggaggaggaggaggaaaTGGCAGTGGTGGTCTTGTCAAACCTGTGGACAATAAACCACCTTACGTTGGTCGAGGTGGTTATCCAGGTCAACAAGTCAAGTTGAGTGGAAACAATAATGATCATAGGAATCACGGTCTTTTATCGGCAAAAGGACCACCTTTAACCTCTTCCGGAAACGGTCCTCAAACTCCCCTCAATTCAACAAACTCTAGTAGAGTTCACGTGGCCGCTTCCAGACTCTCTAGGTTACCTCTCgataatGGAACGAGACATTTGTGTAATGAGAGCACAACGGACTTGGAGAATATTCTCAAGGAAATGACGATGCCGCCCACTCCACTTACTGCAATTGCGCAGACACCAAGGAAGGAGCTCGATTCCAAGTTCACATTTAATCCCGTATTACCCAAGTTAGCTGATTTATCGCCGACATCAGCAGCATCCAAACAATCACGTGAGTTCAATGTATTTCTTatactttattaa
- Protein Sequence
- MSVQAEHAAAVGGPEACHTHHNHNNHGNSHVSAAASLFRAPVRVNPDAYDRTTQQIQSKLGNYSLVKHLLEEPKRLIGIEGVPASPAPSSGSSVRSISSNSSTSSSGSSCRNSPSTQEFKKPGCSGPRSSGTSSSHGSHRGGGGGNGSGGLVKPVDNKPPYVGRGGYPGQQVKLSGNNNDHRNHGLLSAKGPPLTSSGNGPQTPLNSTNSSRVHVAASRLSRLPLDNGTRHLCNESTTDLENILKEMTMPPTPLTAIAQTPRKELDSKFTFNPVLPKLADLSPTSAASKQSREFNVFLILY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01000538;
- 90% Identity
- iTF_01000538;
- 80% Identity
- -