Mbra001838.1
Basic Information
- Insect
- Microctonus brassicae
- Gene Symbol
- snpc-4
- Assembly
- GCA_940306215.1
- Location
- OW675801.1:17027864-17030593[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 7.7e-09 7.3e-06 26.2 0.6 1 45 275 321 275 322 0.96 2 4 1.2e-08 1.1e-05 25.6 0.1 3 45 334 380 334 381 0.96 3 4 7.6e-10 7.2e-07 29.4 0.0 1 43 387 430 387 433 0.93 4 4 6.4e-08 6.1e-05 23.2 0.1 3 34 442 474 441 479 0.91
Sequence Information
- Coding Sequence
- ATGTGCGATGAGGAAGATGATTTGGACATTCTTGATGATATCAAAGCACTTGAGCAAGCACTGGGTCAAGAATCATTAACGCTAGCATTtgacaatgaagaaaatgatggtGATGTAGAGGATGAAGCCAATGGCGAGGATGTAGAAGATAATAATGGAGCATTGGTCcttattaattcttcattcgaaaaaataaattcacccaATGTAAAATGCATTAAACAGAAATCAAAATTAGATATTAAATGTGATGACCTTTATGATACTATTGATTCTGCTATCGAAGCCAATGCAAATCTTCTTGCAGCTTATAAATCAGCTCTGATTGCAGTTAATACTCGGTTAGATCAATGTGAAAAACTTTGGCAAGAGGCAGATTAtcaagttaatttaattttacgtGGTGGTAGAGCCAATTGGCGTGTACCGTATTTTAAAGCTGGACAACCGTACTTTAAAGATGAAAATCATTTTCCTGCAACGCCAAATGAAGATCagtcaataaaacaaaaaagagaTGAATTTCCAATTGTTTATGCACGTTTACCGGGAAAATGGTCAGCAAAAGGACGGACAAATTTATGGAATGCAGCACGTGCCAATGCTTCATTGAAATATCTTGAAAAACTTAAATCAATGAATAGAAATAGTGATCATGCATCGATAAACTATGAAATTCCTTCGGATTTTTTACATGTACTCCAAACTTTGGGTGATACTGAACTTGATTGGATGAGAATATCTGTAAAAGATATGAAAAGTCGATATTCTTGGCAAGCATGCAAAGCAATGTGGGATCTTCATATGAAACCAACTAATAATCGAGAAAAATGGCGAAGTAGCGAGGATAATATGTTAAAATCATTGGctaaatgttataaatatcaaaattggaatttaattGCAGAAAAATTGGGAACTAAAAGAACGTGTTATCAATGTTTTGTAAGGTATAATACATTAAATCCACCATCAACATCAAGTTGCAATATAGATATACCGTGGTCACAAATGGAGGATGAACTTTTAAATGAATTAGTTGAAAAATTACGAATTGGTGATATAATACCATGGACATTAGTGACATTTTATTTAGGTAGTAGAACTAAAAGTCAAATTTATTGTCATtggaaatataatttggatCCAACATTGAAAAAAGGTAGATTTACAATTGAAGAGGATCAAATGTTATTAAATGCTGCTAATAAATATGGTAAAAATTTTCCACGAATTGCTGCAGAATATTTTCCACACAGAACAAGTGTACAATTAAATACtcgttttcatttattaatgttaaaaaCTGATGAATCATATAATTCATGGACACATGCTGAAGATAAACAGTTGCTTGGGTTATACGATGAATTTGGTAATAATTGGCGTGTTATtggaaatattatgaataaagatCGAACGTATGTTCGACATCATCATGCAGCGCTCACTCGTCATTTATCAAAGGGAATTGGTCTTGCTGATGTgccgaggaaaaaaaatacaatgaccgctaatgataatgatgaaatggatgatAGTGATATTGAAGACAGAATAAATGAGAATATTGATGCACAATTAATACGTTATTTCCAAAATATACCTAATCCAATTCCACCAACAggcagaaaaagaaaatatcacACAGCTCaacaattagaaaataaaacaaaacaacttcgtgatgtatttaaaaagttaaatgttaattttaaaataccaGATAATTTAGATGACTATGAAGAACTCACAATTAtggataaacaattattaatatcattgaaaCAATCTGGTGGTATAAATTCATCGAATTATACATCCGATCAAATTGAACAATATcgtttaaaaatgttttgtacAAATAAATTGGATGATAATACAGAACAGTTTATTCCACCTGCGCCATTTGGTTTATTTCAAAATGTACGTAAACGTGGAAgatctaaaaaaattaatgctgATACTGTTTGTGATAATtgtaatgttgaattaataatggaATTTGAAACTccagaaaatattaataaaatgttgagTATTAATGAAATGgaattgtttgataaatttaaaaagataatttcacaaaaatgtaaaatgataCAACATCCTGGAaggtttgaagaaaaatatatgaagtCTCTTAGATTGATTCGACAAAAATCATGCGATGATCCGGATCCACAAGAAGGAACTTCAACTTTTATTCCAATGGATGAagaatcaatgaaaaaaatgaatgaaaccTTTATTGAACCGTGCTATTCAACATTACGTGGATATCAATGTCTATTAAAtatgcaaaaattaataaacaaaccTATTTCGGATAATTTTTTACCAGAGGGAATATTCAGTAATAAAGAAAGTAAACacgcattttatttattaaaaaatcgctttcgtgttttatttaaatatccgATTGGTATGACACGAATACCAGTAAGCTATCAAGAAGTAAATGACGTTGATAATGAAGTGGAAAAGGAAGAAGAGatggaggaggaggaggaggaggatgGCGCTGTGGAGATGTCATTTAATGTGCCTGCGTTAGAAGAAGATGCATTTGAAATGTTGCCAGTGTCTCCTAGTAGAGAGCTAGTTGAATTATCAGCAGGAGACGTTGAAGTGTCGACGCCATCGCGACTAAGTTTAAATATGGTTAAAACGTTGcgtaggaaaaataaaaataaaaataataaattaaatattccaaataattga
- Protein Sequence
- MCDEEDDLDILDDIKALEQALGQESLTLAFDNEENDGDVEDEANGEDVEDNNGALVLINSSFEKINSPNVKCIKQKSKLDIKCDDLYDTIDSAIEANANLLAAYKSALIAVNTRLDQCEKLWQEADYQVNLILRGGRANWRVPYFKAGQPYFKDENHFPATPNEDQSIKQKRDEFPIVYARLPGKWSAKGRTNLWNAARANASLKYLEKLKSMNRNSDHASINYEIPSDFLHVLQTLGDTELDWMRISVKDMKSRYSWQACKAMWDLHMKPTNNREKWRSSEDNMLKSLAKCYKYQNWNLIAEKLGTKRTCYQCFVRYNTLNPPSTSSCNIDIPWSQMEDELLNELVEKLRIGDIIPWTLVTFYLGSRTKSQIYCHWKYNLDPTLKKGRFTIEEDQMLLNAANKYGKNFPRIAAEYFPHRTSVQLNTRFHLLMLKTDESYNSWTHAEDKQLLGLYDEFGNNWRVIGNIMNKDRTYVRHHHAALTRHLSKGIGLADVPRKKNTMTANDNDEMDDSDIEDRINENIDAQLIRYFQNIPNPIPPTGRKRKYHTAQQLENKTKQLRDVFKKLNVNFKIPDNLDDYEELTIMDKQLLISLKQSGGINSSNYTSDQIEQYRLKMFCTNKLDDNTEQFIPPAPFGLFQNVRKRGRSKKINADTVCDNCNVELIMEFETPENINKMLSINEMELFDKFKKIISQKCKMIQHPGRFEEKYMKSLRLIRQKSCDDPDPQEGTSTFIPMDEESMKKMNETFIEPCYSTLRGYQCLLNMQKLINKPISDNFLPEGIFSNKESKHAFYLLKNRFRVLFKYPIGMTRIPVSYQEVNDVDNEVEKEEEMEEEEEEDGAVEMSFNVPALEEDAFEMLPVSPSRELVELSAGDVEVSTPSRLSLNMVKTLRRKNKNKNNKLNIPNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01002012;
- 90% Identity
- iTF_01000477;
- 80% Identity
- -