Basic Information

Insect: Microctonus aethiopoides
Gene Symbol: -
Assembly: GCA_030347275.1
Location: JAQQBS010000001.1:7179962-7184482[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.5 5.8e+02 1.2 0.2 5 17 259 271 258 275 0.85

2 15 1.2 1.1e+02 3.5 0.1 3 23 286 306 285 306 0.95

3 15 8.2 7.4e+02 0.9 3.7 1 19 333 351 325 354 0.79

4 15 0.00039 0.035 14.5 0.6 1 22 427 448 427 448 0.95

5 15 0.0022 0.2 12.2 0.0 1 23 457 480 457 480 0.95

6 15 1.1 98 3.7 2.7 5 23 493 512 490 512 0.91

7 15 0.096 8.6 7.0 0.5 2 19 533 550 532 553 0.91

8 15 0.88 79 3.9 0.3 2 23 561 583 560 583 0.81

9 15 0.0083 0.75 10.3 4.2 1 23 594 617 594 617 0.94

10 15 0.00047 0.043 14.2 0.1 1 21 643 663 643 664 0.95

11 15 0.0027 0.24 11.9 1.5 1 23 671 694 671 694 0.94

12 15 0.0004 0.036 14.5 0.3 1 19 796 814 796 817 0.94

13 15 0.002 0.18 12.3 5.3 1 23 858 880 858 880 0.99

14 15 0.86 77 4.0 1.6 1 13 892 904 892 907 0.88

15 15 0.0055 0.5 10.9 0.2 3 23 1107 1128 1106 1128 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.5	5.8e+02	1.2	0.2	5	17	259	271	258	275	0.85
2	15	1.2	1.1e+02	3.5	0.1	3	23	286	306	285	306	0.95
3	15	8.2	7.4e+02	0.9	3.7	1	19	333	351	325	354	0.79
4	15	0.00039	0.035	14.5	0.6	1	22	427	448	427	448	0.95
5	15	0.0022	0.2	12.2	0.0	1	23	457	480	457	480	0.95
6	15	1.1	98	3.7	2.7	5	23	493	512	490	512	0.91
7	15	0.096	8.6	7.0	0.5	2	19	533	550	532	553	0.91
8	15	0.88	79	3.9	0.3	2	23	561	583	560	583	0.81
9	15	0.0083	0.75	10.3	4.2	1	23	594	617	594	617	0.94
10	15	0.00047	0.043	14.2	0.1	1	21	643	663	643	664	0.95
11	15	0.0027	0.24	11.9	1.5	1	23	671	694	671	694	0.94
12	15	0.0004	0.036	14.5	0.3	1	19	796	814	796	817	0.94
13	15	0.002	0.18	12.3	5.3	1	23	858	880	858	880	0.99
14	15	0.86	77	4.0	1.6	1	13	892	904	892	907	0.88
15	15	0.0055	0.5	10.9	0.2	3	23	1107	1128	1106	1128	0.95

Sequence Information

Coding Sequence: ATGAGTTcgaaatcaaatgaatttattttgcaaaatGAAGAAcagaataatcaatttaataatgataaacaaacaGATAATGCAGTTATATTACAACAATCACCATCAGTTTCAAATAGTCAAAATGATCATAATAAATCATTAGattcatcaacatttttatttaatccgCCGTTAGTTAAAATTTGCGCGGTGCCTAATGAGGTTGAAACTTTATTGAATGATTGTGATGAGACTGATGATAGTTTTAGTGACATCAGTAATAACAGCGATGAcagtaatttttctttaatgaCTGATATCTGTATGGATGATTACTCACCGAAAAAATATAGTTTGCGTTCAAGAACagcatataatatttcatatgatgAAACACCAAATCGTTCGATGCAACGAAAATGGGCAATGTTACGAAAGCGTTTTAATTGTCGTAATTGTCGAAttgaattgaagaaattaagtcttccattatcaaataataataataaatcatccaatgaaattattgattatacaAACACCAAAAATGATGAgactattcaaataaattctagACCAACTGTTGgaatggaattaaaaaatcttGATTTAGCTTTAAAGAAATTACAAGATGTATTTCATAAacaagatgaaataataaataatgattcatATAATTCGCCAGGagattcacaaaaattaagtgaatctatgaatattaaaaattcttcatcatctcAAATCATCGCTGTTGGAGATGTaaccacaaataaaattgtttatatgtcAAGTTTGTGTCAAACACGAtttaccacaaaaaaaaaattaatttttcattatttgtgcTTCCATACAAATCCGCGTTATCAAGACTGCGCTGTTTGTCGATCACAATATACAAACATAGCTGAATTAACTGATCATTTATCGCAACATTGCATTGAAATACCTGAATCACAAAACGAAAAATCGCCACTTGATCCAAAAGGCCCATGCGaaaattgtaaagaaaaatacgCATGTAAAGgttgtaaaatgaaattttggtTAGTGTCACATTTACGAGATCATGAACAACATTGTTCATTGGcagatcaaataaaaatgaataattcattgaataatattaatgtttatgaaCAAAATGTTGTTGATAAACCATCGGCAAGTGATAATTCTACAGAGACAAAACAAAATGATGATGCTGTTAATTGCAGCACAAAACCATCAGAATTTACTGATGAATCATctttaactaaaaaatattattcaaaaactgGTGATTCagaacaattatttacatgtaAAGTCTGTCGTTCAGCATTCAGAACCTCTTCGAATCTTGacgaacatataaaaaaattttcgttacGTAGAATGAAAAGTTATTATTGTTATCGTTGCGGTACACCATTTCCTTCCGCTGCATTATTGAGTGCACACTCAAGGGCAGCACATTTACCAGAAGCATCAATATCGAAAATTCATTGCATCATTTGTCAGCAAGAATTTAATGCAAGAAGAACATTACGAGAGCATATGATGCACATTCATcgtgaagaattaaaaaaacatattgaTGATGTACCAAAAGTAATATGGAATCTTGCAAAAACTTGTAGCATAtgtaaaacaatattttctgATCGTAAACGATTTATTGAACATTCTATGTATTATTACgacgatgaaataattgagtgCAGTATGTGCGGAGAAGTATTTTTAGGACGATATAAGGCACATGCCCATACAAAAATCGTTCATTATTCAGCAGAAATGCGTCAGAGTTATACATATTGCTGCAATATTTGTCTCGAGGGTTTCGTTTATCCATCGcatttatattctcatatGTATCATGTTCATGATACTGAAATTCAACATGAACAAAATATACACGATAATGGAACTAAACATGATAATAATCAGCATGGACTATTTTACATGTGCCGAGTTTGTAATGAAACATTTGATACGCCCACGTTATTGACTGATCATCAAAtggaatattcaaatattggcgattttaattgttcaaaatGTCGGCGAAAATTTcagacaaatttattattagaaagaCACATTGAATTAAGTCACTCTGGTCAGACTCATGTTAACCAAATAGAATGTCATTCATGTCATGAAATTTTACATTCTAAATCATCATGGCTGTCTCATTTGAAGCACTTTCATATCAATGCTAATACCGATAATCATTTATCTGAAATGTGGTTACGTAACGAATCTTCTTCGTATAAATCAGTGAAAAATTCGTGTGTTACTTCGTTGCCTGTTGATAATTCGgccaatgaaaatgaaattaataaaactattaaTGCTGTTACTAATGACACGGGTAATAATGAAGACTCACGTGTGTCTAATCAAATGCAAATTGAATATACTTGTGCATTATGTgacatgaaatttataaatagttcaGAGTTAAAAACTCACTCACTTAAATTTGGTAACACTTGTGTTAATAATACCGGAATggtaaatacaaatttttcaattgccagtatttattcagttgaattagaagattatgaaaatttgtgCGATACAAAAGAtgatgGTAATTATGAATGCAATCTTTGTAaacgaaaatttaaatttattggacATTATCAAATACATTATAGAAAACATGAAAATCGACAACGTGAAACAACTACACcagtatattattgtaaaacatgcgatgaaaaatttgtttctgaAAAATCGAAATATTGTCATTTTGCTCATATACATGGTATATTGTTAGAATTACTTCCATCATCTGAATCAAGTATAAAACGACGGTCATCGCCGCGGCAATCAAAGCCACAGGTTcagacaaatttatattcattttttcaacgtAATTCAACCGTTGAAGAATCGAaagaatcaaataatattaatcataatatgGAAACACATGTTGATGTTATCCGCGAAAAAGAAGTGTTGAGTAATCAATCGAAAACGAACATAAATCCAAATATGATTCCGAATCCGATTGTGCAACAAAATTCtttagaaaatattcataaagataattctacaatatttgaaaattcagaggaaatttcaaatttatcaattacgCCTGTTGTAATTCCAGAGAATTTGTTTGAAGAGccaatgaaaattgttgaaacaaataaaaaagttgtggaaggaaatgaaattgtaattgagaatggaaatgaaaatgaaattgtggATGTTGAAAATGAAATCGTAGAAAtcgaagtaataaataaagataaagaaattacagttgatgatgaaattattgaattggaaaatgaatctgcaaataaaaataagtcaGAATTATGTGACGTTTGTGGAGATGCATTTACAAATAGACAGGACTTATTTGATCATCAAAAAGATTCTCATAATATTGAAGTGATTGCAGAGTCACAAAATAATGTACAATGTGAATTCATTGATATCGAATCAATAATTGAGGATGAAAatgaaagtgaaaataataatatggcaACAGATTTTGATAATGACgacattgatataatttttgatagtaCTCGAGGATGTGATGACGATGttgatgctgatgatgataatgatgatggtgatgttACTGAAAAATGCGTAATTACCCATCCAATAAAACCAGAAAAAActtatttaagaaaaaatcGATTAGAGTgTCCTATAAGATTTCCTCGATTAGTTCCACTTCCAAGgaacacatatattataccatTTAATCGACAATTATcacaaaaaacaaatcaacatCACAATAATGATGCACCACGATAA
Protein Sequence: MSSKSNEFILQNEEQNNQFNNDKQTDNAVILQQSPSVSNSQNDHNKSLDSSTFLFNPPLVKICAVPNEVETLLNDCDETDDSFSDISNNSDDSNFSLMTDICMDDYSPKKYSLRSRTAYNISYDETPNRSMQRKWAMLRKRFNCRNCRIELKKLSLPLSNNNNKSSNEIIDYTNTKNDETIQINSRPTVGMELKNLDLALKKLQDVFHKQDEIINNDSYNSPGDSQKLSESMNIKNSSSSQIIAVGDVTTNKIVYMSSLCQTRFTTKKKLIFHYLCFHTNPRYQDCAVCRSQYTNIAELTDHLSQHCIEIPESQNEKSPLDPKGPCENCKEKYACKGCKMKFWLVSHLRDHEQHCSLADQIKMNNSLNNINVYEQNVVDKPSASDNSTETKQNDDAVNCSTKPSEFTDESSLTKKYYSKTGDSEQLFTCKVCRSAFRTSSNLDEHIKKFSLRRMKSYYCYRCGTPFPSAALLSAHSRAAHLPEASISKIHCIICQQEFNARRTLREHMMHIHREELKKHIDDVPKVIWNLAKTCSICKTIFSDRKRFIEHSMYYYDDEIIECSMCGEVFLGRYKAHAHTKIVHYSAEMRQSYTYCCNICLEGFVYPSHLYSHMYHVHDTEIQHEQNIHDNGTKHDNNQHGLFYMCRVCNETFDTPTLLTDHQMEYSNIGDFNCSKCRRKFQTNLLLERHIELSHSGQTHVNQIECHSCHEILHSKSSWLSHLKHFHINANTDNHLSEMWLRNESSSYKSVKNSCVTSLPVDNSANENEINKTINAVTNDTGNNEDSRVSNQMQIEYTCALCDMKFINSSELKTHSLKFGNTCVNNTGMVNTNFSIASIYSVELEDYENLCDTKDDGNYECNLCKRKFKFIGHYQIHYRKHENRQRETTTPVYYCKTCDEKFVSEKSKYCHFAHIHGILLELLPSSESSIKRRSSPRQSKPQVQTNLYSFFQRNSTVEESKESNNINHNMETHVDVIREKEVLSNQSKTNINPNMIPNPIVQQNSLENIHKDNSTIFENSEEISNLSITPVVIPENLFEEPMKIVETNKKVVEGNEIVIENGNENEIVDVENEIVEIEVINKDKEITVDDEIIELENESANKNKSELCDVCGDAFTNRQDLFDHQKDSHNIEVIAESQNNVQCEFIDIESIIEDENESENNNMATDFDNDDIDIIFDSTRGCDDDVDADDDNDDGDVTEKCVITHPIKPEKTYLRKNRLECPIRFPRLVPLPRNTYIIPFNRQLSQKTNQHHNNDAPR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01001661;
90% Identity: iTF_01001661;
80% Identity: -