Basic Information

Insect: Microctonus aethiopoides
Gene Symbol: L
Assembly: GCA_030347275.1
Location: JAQQBS010000003.1:8625112-8630656[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 2.8e-06 0.00025 21.2 0.9 1 23 95 117 95 117 0.98

2 17 0.37 34 5.1 3.9 1 23 123 145 123 145 0.97

3 17 6.1e-07 5.4e-05 23.3 2.3 1 23 151 173 151 173 0.99

4 17 5.7e-05 0.0051 17.1 0.9 1 23 179 201 179 201 0.98

5 17 5.6 5.1e+02 1.4 0.1 9 23 285 300 277 300 0.86

6 17 0.0042 0.38 11.3 2.0 1 23 368 391 368 391 0.93

7 17 0.67 60 4.3 0.1 2 23 402 424 401 424 0.87

8 17 0.8 72 4.1 0.0 3 23 483 503 482 503 0.97

9 17 0.065 5.8 7.5 3.6 3 23 517 537 515 537 0.96

10 17 0.66 60 4.3 2.4 1 23 546 569 546 569 0.92

11 17 0.64 58 4.4 1.2 1 23 574 597 574 597 0.91

12 17 0.15 13 6.4 2.9 1 23 673 695 673 695 0.97

13 17 0.0046 0.42 11.1 3.1 1 23 700 723 700 723 0.94

14 17 0.079 7.1 7.2 0.4 2 23 779 802 778 802 0.89

15 17 0.00023 0.021 15.2 1.9 1 23 820 842 820 843 0.95

16 17 0.039 3.5 8.2 0.1 1 23 852 875 852 875 0.81

17 17 0.012 1.1 9.8 7.9 1 23 1083 1105 1083 1106 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	2.8e-06	0.00025	21.2	0.9	1	23	95	117	95	117	0.98
2	17	0.37	34	5.1	3.9	1	23	123	145	123	145	0.97
3	17	6.1e-07	5.4e-05	23.3	2.3	1	23	151	173	151	173	0.99
4	17	5.7e-05	0.0051	17.1	0.9	1	23	179	201	179	201	0.98
5	17	5.6	5.1e+02	1.4	0.1	9	23	285	300	277	300	0.86
6	17	0.0042	0.38	11.3	2.0	1	23	368	391	368	391	0.93
7	17	0.67	60	4.3	0.1	2	23	402	424	401	424	0.87
8	17	0.8	72	4.1	0.0	3	23	483	503	482	503	0.97
9	17	0.065	5.8	7.5	3.6	3	23	517	537	515	537	0.96
10	17	0.66	60	4.3	2.4	1	23	546	569	546	569	0.92
11	17	0.64	58	4.4	1.2	1	23	574	597	574	597	0.91
12	17	0.15	13	6.4	2.9	1	23	673	695	673	695	0.97
13	17	0.0046	0.42	11.1	3.1	1	23	700	723	700	723	0.94
14	17	0.079	7.1	7.2	0.4	2	23	779	802	778	802	0.89
15	17	0.00023	0.021	15.2	1.9	1	23	820	842	820	843	0.95
16	17	0.039	3.5	8.2	0.1	1	23	852	875	852	875	0.81
17	17	0.012	1.1	9.8	7.9	1	23	1083	1105	1083	1106	0.95

Sequence Information

Coding Sequence: atgTTATTCAAGGGTAATAGTTCACGATTGGAATTTCTTATTGAAAGAATTCAAGCGCACAAAGAATCACCATCACCACTTGCCGATGAAAAATGCCTTTCACGATCAAAagaAGGAACGATGGTTAATGGAAGTTTTTCATGGCGCAGTGAGGAAGACAGTCTTAGAGGTGGTGGTACACCTTCATCATGCACAACATCAACATCAATGAGCTTTGCATCGGAGCctgatattgatattgatacATTACGAATGGGCGATGGGAATAGTATATCTGGACCTTATCCATGTCAATTTTGTGATAAATCATTTCCGACAttgagtttattaaaaaaacatgaacAGAGTCATGGTGATCAAATGCCATATCGTTGCAGTTGGTGTGCAAGATTATTTAAACACAAACGTAGCAGAGATCGGCATGTGAAATTACACACTGGTGATAGACGATATCGTTGCACGCAATGTGAAGCAGCATTTTCACGAAGcgaTCACTTGAAAATTCATATGAAGACACATGACAATCAAAAGCCTTATCATTGCACTGAATGTTCACGAGGTTATAATACAGCAGCAGCATTGACATCTCATATGCAATCCCACAAACGATCACAATCGTCAAATAGTCAATATacaagaataataaatgatgatagACGTAGTGCATCATGGCCAAGTGGTGgtgcatcatcatcaccaatcgttaattcatcattttcaaatattccattgtctacaatacaaaaaaaaatgtcatcaaGTTATTCGtttgattcaataattaatgatcAATCAAATAATCCATTTGCCAAATCATCAATGACATTGGCATGTATGTATTGTGCTAAAGACACATTTACCAGTATGGAACAGCTCCAATTGCATGTTTATACAGCACATGAGGGAATTTCGAATGGTAAAAGTCCATCAATATCACCAATTGATCTCaatgattataattcaaagcgtttgaaaaaaaataatgataaattagaaTTGGAAACTATCGCCATcaccactactactactactgctacTAGTACTACTACTAACCCTATTGCTACTGCAATAAAAGATAAATCAGTTGTCACTAAAGAATCGTTTGACTGCAAACATTGCACaatgaaatttacaaaaataattttattacaaaatcacATGACAGAAGTTCATCGTGATAATATTGCAACTGGATCAATATTATCGTGTCCATTGTGTGGTATTCCATGTGATTCAACTGCATCATACGTCGAGCATTACGTTCTTGAACACTGTAATAATCCAAAAATTCCAACTGAAAAAAATCCAGATGATAGTGcatcaaaaacatttaatgaaaaagaaaatgacgTGTCAAAGCATCAAAGTTCCACTTTAATAAAGgaatatacaatgaaaaatacacaagtaaataatattgataaatattcatctaaTACATTACTTTGTGGACAATGTGGTGCTGcattagaaaattttgaattatttagagCACATGTAGCGATGCATCTCCaagtaaataatcaattaaaatcaaatgtaataaattgtcCAAAGTGCGATTCAACTTTTCAATCGCATCACGATATGATTAGTCATTTAACAAAACATTATCTTGGACAACCAATGAAGCAATATTCATGTGATGcttgtgataaatattatcttgACTGTGAATCACTCAAGAAGCATCTTTTTGAATCACACTCACATCATTTGTATAGATGCACTCTTTGCCATGATACATTTGACTCGAGTATTGCCATTCAAGTGCATTTCACCGTGAAGCATGTACATGAGTGCAATGTATATCAGTGCAATGGATGCAGTATAAATTCAAAAGGTCGAGACGAGTCTCATGAGAGTACATTACAGATGAGTGGTAGTGTCTTTAAAAGTGCTACAGAAATGATGAAGCATGTAGAGAATGTACATGCTAAAAGTAAATCATACATGAATGAACTTTCATCACCAGGAAATGCTGTCTCGACACCTGCTGGTGTTATTGGTGGATTATTTCGATGTTGTTTTTGTGGTATTTATTGTACTTCAGATGTTGATTTACAATTACATCTTGCTAGTCATTCCACTTGCCTTTATCGATGTCCAATATGTCATGAAGGTTTCactgttgaatttttattagacAAACATATTGCTCATTGTCACagtattacaaataataataacacaatggagtgtaaaaaaatatattattcatcagaGCAAGAAGAAAAgatGAGAAATAAACGACGACGTTCAccaaatgttaataataatttgaataaattggaGAATATAAAAAGGCCAAATAGTAGGAATATTGATTGTCAACGTTGTGAATATTGTGATAAAACAGATTTTTCAAATGATGCTGAATTGCGAGCACACAAAAAACTCGTGCACAAAACTATATCAGCGTTGAATACGAAATCACAAACGAAATTATTATCGCAGCATGTATGCAGTTATTGCGGTGAAAGTTTGCGTACGAGGTTGGAATTAGAGGCGCATACACGACTACATCATGCGCCAAATGAACAAGGCAAACGTTACAAGTGCAATATATGCGATGAAATATTTGCCACTGGTGGTATATTAGCTGAGCATAAATTACGAaaacattgtaaaataaaattgagcgATGTATGCATTGTTTGTCgtggtgaattaaaaaatgaaacagatttttttcatcacgtaCAAAAACACAGTTTGGAAACATTTGATCCACAAAATCAacgaaatgataataatactcCAGCAGTATCTCATATAACAGCACATTGTGTTGTATGCAGACAAACGTTAATTAGTGAATTGGAATGTCAATTACATGCCAAGTatcatttacaaaataatataattaacagcgataatgataaaattcaatgttGTTGCATTTGTCTTCGTGAATTTTgtgatgaagatgatggaattaatttattatcaaaatgcaTTACAATGAGTGAACAACAATTGAGGGTGTGTAAGCGTTGTTATATGAGACATTCGCAGGGTTTACCAATTTTGGGTTCGCTTGCAAATAATTGGAGTGACATTGGAATAATCGATGATGATGGAGAGAAAatggataatattataaatggcaagggaattaataatgattgtaaaataaatttgatcaaGTATGAAAGTTATGATGGTAGTTGTGATGATGGTGAAAATATTCCGTTGAATTTTGATAATGATACCGTGAATTTAAATGTTTCTGGCATCCGTCCATATTGCTGTAATCATTGCACTCTCAAGTTCACCTTTAGAACTGAATTGGAGCGTCATGTTACTATTCatcatgacaataataaagccACGATAGCGTCTTCCTCCTCTGTCTCCTCTTCAACATTACAATTCAACATTCAACAAAAGACATTGGCAGGCCATTCGCAAACTCAGGAGGACAATAAGACggtagaaaatattattgttaaagaaGAGATTATTGTTAATCCAGAAGAAGAAATAGAAGAAGTAGAGGAGGATGAAgaggatgaagatgaagaagaagaacaaGAAGAAGGTAAAGAGAggaaggaagaaaaagaagaagttGATGAAGTATCAAAAGTTGAtgcaattaattga
Protein Sequence: MLFKGNSSRLEFLIERIQAHKESPSPLADEKCLSRSKEGTMVNGSFSWRSEEDSLRGGGTPSSCTTSTSMSFASEPDIDIDTLRMGDGNSISGPYPCQFCDKSFPTLSLLKKHEQSHGDQMPYRCSWCARLFKHKRSRDRHVKLHTGDRRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYNTAAALTSHMQSHKRSQSSNSQYTRIINDDRRSASWPSGGASSSPIVNSSFSNIPLSTIQKKMSSSYSFDSIINDQSNNPFAKSSMTLACMYCAKDTFTSMEQLQLHVYTAHEGISNGKSPSISPIDLNDYNSKRLKKNNDKLELETIAITTTTTTATSTTTNPIATAIKDKSVVTKESFDCKHCTMKFTKIILLQNHMTEVHRDNIATGSILSCPLCGIPCDSTASYVEHYVLEHCNNPKIPTEKNPDDSASKTFNEKENDVSKHQSSTLIKEYTMKNTQVNNIDKYSSNTLLCGQCGAALENFELFRAHVAMHLQVNNQLKSNVINCPKCDSTFQSHHDMISHLTKHYLGQPMKQYSCDACDKYYLDCESLKKHLFESHSHHLYRCTLCHDTFDSSIAIQVHFTVKHVHECNVYQCNGCSINSKGRDESHESTLQMSGSVFKSATEMMKHVENVHAKSKSYMNELSSPGNAVSTPAGVIGGLFRCCFCGIYCTSDVDLQLHLASHSTCLYRCPICHEGFTVEFLLDKHIAHCHSITNNNNTMECKKIYYSSEQEEKMRNKRRRSPNVNNNLNKLENIKRPNSRNIDCQRCEYCDKTDFSNDAELRAHKKLVHKTISALNTKSQTKLLSQHVCSYCGESLRTRLELEAHTRLHHAPNEQGKRYKCNICDEIFATGGILAEHKLRKHCKIKLSDVCIVCRGELKNETDFFHHVQKHSLETFDPQNQRNDNNTPAVSHITAHCVVCRQTLISELECQLHAKYHLQNNIINSDNDKIQCCCICLREFCDEDDGINLLSKCITMSEQQLRVCKRCYMRHSQGLPILGSLANNWSDIGIIDDDGEKMDNIINGKGINNDCKINLIKYESYDGSCDDGENIPLNFDNDTVNLNVSGIRPYCCNHCTLKFTFRTELERHVTIHHDNNKATIASSSSVSSSTLQFNIQQKTLAGHSQTQEDNKTVENIIVKEEIIVNPEEEIEEVEEDEEDEDEEEEQEEGKERKEEKEEVDEVSKVDAIN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01002346; iTF_01001666;
90% Identity: iTF_01002346;
80% Identity: -