Maet011799.1
Basic Information
- Insect
- Microctonus aethiopoides
- Gene Symbol
- -
- Assembly
- GCA_030347275.1
- Location
- JAQQBS010001423.1:8657769-8661837[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 1.6 1.4e+02 3.1 4.9 2 23 233 255 232 255 0.95 2 21 0.029 2.6 8.6 1.8 1 23 330 352 330 352 0.97 3 21 0.048 4.3 7.9 0.4 1 23 401 423 401 423 0.98 4 21 0.0022 0.2 12.1 0.4 1 20 469 488 469 490 0.95 5 21 0.13 12 6.5 2.3 1 23 502 525 502 525 0.95 6 21 0.019 1.7 9.2 2.7 2 23 531 552 530 552 0.96 7 21 0.00016 0.014 15.8 0.5 3 23 575 595 573 595 0.98 8 21 8.5e-05 0.0077 16.6 0.8 1 23 601 623 601 623 0.97 9 21 2.1e-07 1.9e-05 24.8 0.4 2 23 663 685 662 685 0.96 10 21 0.11 10 6.7 3.6 1 19 691 709 691 714 0.88 11 21 2.3e-05 0.002 18.4 2.3 1 23 721 744 721 744 0.97 12 21 0.00068 0.061 13.7 0.4 3 23 753 773 751 773 0.93 13 21 0.034 3 8.4 0.1 2 20 832 850 831 850 0.95 14 21 0.02 1.8 9.1 0.2 2 23 869 890 868 890 0.96 15 21 5.8e-05 0.0052 17.1 0.4 2 23 907 928 906 928 0.96 16 21 0.00084 0.076 13.4 0.1 1 23 949 972 949 972 0.90 17 21 0.034 3.1 8.4 0.5 2 23 1034 1056 1033 1056 0.95 18 21 3.3e-05 0.0029 17.9 0.5 2 23 1080 1102 1079 1102 0.94 19 21 0.065 5.9 7.5 0.8 1 23 1108 1132 1108 1132 0.96 20 21 2.4 2.1e+02 2.6 2.3 1 23 1137 1160 1137 1160 0.94 21 21 0.075 6.7 7.3 0.0 2 23 1190 1212 1190 1212 0.93
Sequence Information
- Coding Sequence
- ATGGATGATGTCGTTGAGCTTGATAATGTTCGCAATTTGTGCAGATTGTGTCTATCAACGGATGAACCAAGATCGCCAATATTTGGCGTCCAAGAGTCGTCGGTGCCATTGGTGGAAAAAATACAAGCGTGTCTCTCCATTGAGgTTTTATCTAATGACAAATTATCGACtttgatatgtataaattgtaCAAAAAGTGTTAATCAATGGCATACATATAAAGAATCATGTCTACAGTCGCAGGAAAAATTACAGCGATGGCTGTCCATGCAAACCAAAGCATCAGCTGCACTTATTGCAGCGATTAAACCTGAGCCAATGGATATTGAAATATACGAGGATAATATTGAGATAGTTGAAATGCCAGAAGATGGATCGGAGACTATGAACGATAGGCGAACGGATAATGTTTCGTGTATGAATAATTCAGGTaaagaaagaattaataataatcctgAACGATTGTTACATCAATCGGAAATTAAAAGCGAACCAAtcgatgatgatgaggttgaatgtaatattgaaaatgattcgGTGAATGAAAgcgaattattgataaatccaATGGCGTTGGGagctaataaaaatatggagccagattcaacacaaaaatttaatgcTGCGCGTggatcaaagaaaaaaattcgacGTGGTCCTCATACACATTTTCGGGGCGTTAAAGTGTACAAACAACGCTGTCCACATTGTCATTTGAATTTACATTCAAAAACAGCGTATGCCAAACATGTGGAGCGTTATCATCGTAATTTATCGCATTCATCAAAGAATCCATCTCAATCTGGACCACGTAATGGTGGTatgacatatataaataaagatgatgaacagcagcagcagcagaaGGCAAATAATGATGCTGAAGATGAGGAAATGATTGAAGATGTTGAGGAGGAATTGGTTAGTTTAGAAAAAGACGCGCCGTTGACCAAAGTTCAGGAGTCTATTATCAGTCAATTGAAAACATTCTCTTGCTATGCATGTCAGCAATCATTCAATGATCGTCGTAGTACATTAAATCATATACGCCAACATATGCCTGATTTGAGACCGTATACATGCATTGCATGCCTCACCGAATTTCCCGATCGGTCAATTTATAAACTTCATTGTGGCGCTTCATTTGAGTGCGCGATGAAAATTGCATTGGTTGTACCTAAACATGGCacggaaaaatatttcacttgtAATATGTGTTTGAGACCAATGCCAAAtcgaaaagaattaattagtCATTTGTCGAAACATTCTGATCGACAATATGAACAATTAACAGCGCCAGTAAAATTACCaccaaaattaaaatcaataacatCATCTGGTACAAAATctacaacaataaaaacattattgcCGTATAGAAATGGAGATCCAGCGCACAATCATACGTGCGATTATTGTGGAATGATTTATCGTTACAAACCAAATATGGTGAAGCATCAGGATTTATGCAAACGTTTATCACCCGATGAACGTTCGTCTTATCGTTGTGTTCATTGTGGAATGACATTTTTGgtattcaaaaaattccaatCGCATCTTGCAACTgaacacaataaaaaagatattgtTTGTTACGTTTGTAAcactaaatttaaattctccaatgaatttttagtTCATCATCAGAAGCATCGATTGGCAATTAGACCATCTGATGGACAAACATCTTGGAATAAAGTTACCACAACGAAATTTGGTTGCACTTCTTGTCCCAAAGAATTTTCAACACGTGCTGAATTATCCGAGCATCGAAATACtcatttgaaaatgaaaatattttcttgtacAGTTTGTCGTCGTATGTTTGGTAATTCACAATCATTACAGGAGCACATGAATGATCATGGACCAACAGAAGTTGATCCAGATATATCAGCAGCTGATTTTCTTGAACAGGGCGAATCAGAGGATCCAAATACCAGTGCATGGCCAGTTAATTTAGATCCAGCTGGTAGAAGCACCGAGTGTACACAATGCGGCAAAAGTTTTGCCAATTATCCAAATTTACGTCGACACATACGTTCGGCGCACTCCGGCAATGAACATTTCAATTGTTTCAAGTGCACAAAAACATTTAGAAATGAAAACGAATGGAATGATCATTGTGAGCGTGCACACAAAGAAAATTCAACGGGTTATCGGTGTAattattgtaagaaaaaatttgacaATCGTGAGAGTATGGAATTACATCAACGCAACGTTCATGCTTTAACAGATGATTGTATGGCATGTGACATTTGTGGTAAAGAATTTGGCAATGAGacatcattaaaaattcatcgtGGCCATCATTTTAGACGCGATTCACGATTAAGTATTCGTAATATGCCACATCCAATGGACCAAGtacaagttgaaataaatgatgagcCTGTTGCGTCGTCATtgtcaattttaaaatcacctaaagtaaaaaaatcattttccaatGGTTCATCACCAAAAGCTACGACATCCGGTAATTTACAATGTCAAGTTTGTGACGATCGTTTTACTGATGTTCAAGATTTACGTAAGCATCTGTGGGACATTCATTGCGCAAAAAATAAACCTGAAAAATCATTCGCTGGCGATTTACAATGTGAATTATGTACAAATTTATTTGCCGATCAAAAATCTCTTGATGATCACATGAATTGGCACAAAGATAATCCAATTTTATCTGATGGATTACAGCGACCCGTTGATATATCATGTGATATCTGTGGCAAATTTTATAGTTCACTTAAAGCATTGTGGAAACATAAAAAACTTCACAAGTCAACGGCAACTGCtggtttaaaattttcatcaataaaaaaacctTTACCGACACAATTTCCATGTCCAGTTTGTCGTAAAGTATTTGGCAATGAGACATCGATGAAAAAACATAAAGCTGCTGCACATTTTACACGTCGTACAATATCATCGTTTACATCACCAACAAGAAAACCGTCCACAAGCCAAGATGACGATGATATAAAACCAAAACGACCTAAATTggattttgatattattcgaAAAGCATATAATTTAGGTGAACCTTCAAGCAGTAATTTTAGCAGTAATAATTCCAGCAAAAAACCCGTAACATGTAgtatatgcaaaaaattattaccaagTATGAgttcattatataaacatcGACAGAATGTTCATAAACAAGATCTTAGTAAATCGTTGCCGTCTGCTCTTAGCGATGAGATTATTGAACAGCAATCGGGTGTACCTTGCACCGgttgtgataaaatattttccaataccTCAAATATGAAACAACATTATACTAAAGTTCATGGAAATGGTGGTAAACATTATTGCAACATGGAGGGATGTAATGAGGTTTTTAATTCGCCATTGGCTAAACAAACACATGAAAAAACTCACATGAATATTCTTTATAGTTGTAATTTGTGTTCACGACATATGTTTACACGTATTGCaatgaataaacatttaacGAGTGAACATAAATCGGAATATCAACCGAGTATAGAGAAGagtctttataaaaaaactgatCTTAACAGTTATGTTGTTAAAGGAGCAGAAGGTCGTGTTTGTCCAATGTGTAACATAACTTATCCCAATATTAAGGCtatgaaaattcattatgTGAAAATACACGAGAACAACTCTTAG
- Protein Sequence
- MDDVVELDNVRNLCRLCLSTDEPRSPIFGVQESSVPLVEKIQACLSIEVLSNDKLSTLICINCTKSVNQWHTYKESCLQSQEKLQRWLSMQTKASAALIAAIKPEPMDIEIYEDNIEIVEMPEDGSETMNDRRTDNVSCMNNSGKERINNNPERLLHQSEIKSEPIDDDEVECNIENDSVNESELLINPMALGANKNMEPDSTQKFNAARGSKKKIRRGPHTHFRGVKVYKQRCPHCHLNLHSKTAYAKHVERYHRNLSHSSKNPSQSGPRNGGMTYINKDDEQQQQQKANNDAEDEEMIEDVEEELVSLEKDAPLTKVQESIISQLKTFSCYACQQSFNDRRSTLNHIRQHMPDLRPYTCIACLTEFPDRSIYKLHCGASFECAMKIALVVPKHGTEKYFTCNMCLRPMPNRKELISHLSKHSDRQYEQLTAPVKLPPKLKSITSSGTKSTTIKTLLPYRNGDPAHNHTCDYCGMIYRYKPNMVKHQDLCKRLSPDERSSYRCVHCGMTFLVFKKFQSHLATEHNKKDIVCYVCNTKFKFSNEFLVHHQKHRLAIRPSDGQTSWNKVTTTKFGCTSCPKEFSTRAELSEHRNTHLKMKIFSCTVCRRMFGNSQSLQEHMNDHGPTEVDPDISAADFLEQGESEDPNTSAWPVNLDPAGRSTECTQCGKSFANYPNLRRHIRSAHSGNEHFNCFKCTKTFRNENEWNDHCERAHKENSTGYRCNYCKKKFDNRESMELHQRNVHALTDDCMACDICGKEFGNETSLKIHRGHHFRRDSRLSIRNMPHPMDQVQVEINDEPVASSLSILKSPKVKKSFSNGSSPKATTSGNLQCQVCDDRFTDVQDLRKHLWDIHCAKNKPEKSFAGDLQCELCTNLFADQKSLDDHMNWHKDNPILSDGLQRPVDISCDICGKFYSSLKALWKHKKLHKSTATAGLKFSSIKKPLPTQFPCPVCRKVFGNETSMKKHKAAAHFTRRTISSFTSPTRKPSTSQDDDDIKPKRPKLDFDIIRKAYNLGEPSSSNFSSNNSSKKPVTCSICKKLLPSMSSLYKHRQNVHKQDLSKSLPSALSDEIIEQQSGVPCTGCDKIFSNTSNMKQHYTKVHGNGGKHYCNMEGCNEVFNSPLAKQTHEKTHMNILYSCNLCSRHMFTRIAMNKHLTSEHKSEYQPSIEKSLYKKTDLNSYVVKGAEGRVCPMCNITYPNIKAMKIHYVKIHENNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001580;
- 90% Identity
- iTF_01001580;
- 80% Identity
- -