Maet005281.1
Basic Information
- Insect
- Microctonus aethiopoides
- Gene Symbol
- -
- Assembly
- GCA_030347275.1
- Location
- JAQQBS010000003.1:265449-266933[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3e-07 0.00024 20.7 0.0 5 38 39 72 38 76 0.83 2 3 1.1 8.4e+02 -0.3 0.0 11 23 153 166 153 168 0.82 3 3 9.7 7.5e+03 -3.3 0.0 28 38 451 461 450 464 0.81
Sequence Information
- Coding Sequence
- atgaagACCCGCAAGCAACCTCagtcaataaagaaaaaagtgttGTGTTCAAGTCAAAATAATAagacaacgaaaaaaataaaacatcggAGACTTCAGTATGATAAAGTTAATATAGAGAATGCCTTAAAAGTTGTGGAAAACTCGGGGTTGTCATTACGAAAAGCAGCCGCTGCTTTTGGAGTACCGGTAGCTACTCtgtgcagaaaaaaaaatgttgggtGTGATAACATTAAAAGTAAATCAGGACCAGACACAGTGTTATCATCTACAGATGAGGACGAAATTGCCAAGTGGGTTTTGGATAGGGCTGCTATGGGAGCACCTGTAACAAAAACAGAGTTATTGGACTGTGTCCAAAAATATGTGCAAAAGTCAGCAATAAAAACTCCATTTACAGATGACCGTCCCAGTCGCCACTGGTATGAAGCTTTTAGGAGACGTCATCCAGAATTAGCCGTTAGGAAACCCCAGCATTTGAGTCTCAGCAGAGCAGCTGTCACTTCTGAAGAATTACAAGAGTGGTTCCGAAATTCTGCAAATTACTtggaaagtaaaaaattatgtgataTTTCTCCTACAAGAATTTTCAACTGCGATGAAAGCAGTTTGCTTTTGTGTCCTGATGCAGAGAGTGTATTGGCGGAAAAAGGGTCACGTGCggtttataaaattgttgatggTGGCAAGGAAGCTTTGACGGttctatttatgtatagagCTGACGGAGTTCGAGCTCCCCCGATGCTAATGTTCTCTTTTAAGAAATCAGTGCCAAAGAAAATAGTGGATAATACTCCAAGAGGATGGGGTATTGGAGTATCAGACAACGGTTGGATGACCACAGAAACTTTCTACGAATACATCACAAATGTATTCTATCCATGGCTCATTGATCAAAAAACAGAGTTCCCGGTAATCTTATACATGGATAATCATTCATCTCATCTTAATTTACCGTTGGTGACTTTTTGCCGAGAGAAGCAGATAGAATTAATCATGCTACCTCCTAATTCTACTCACATAATGCAACctttggatattttatttttccgccCCTTCAAAGATTTATGGAAAAAGTGTGTGCCAAAATGGAAAAACCAAGAAGATGttgctcaaataaaaaaagaaaattttcctcTTGTTCTGAAGTTCACTTTAGATAATatgaagaacgaaaaaaatgtCGTAGTTAGTGGCTTCAAAGGGTCAGGACTTTACCCGTTTGACTCTAATGCAGTAGATTATGATATTTTACAGAAAGGCAAAAAACTTAAACAAACTCTCGATAAGAAAGAAAGTGATAACTCCAATTTAGATGAAgagtttttaataaaatttgagaaaaatttaccGGCAGAAACGCTTTCTGAATTCAAAAATGCAGCAATCAGCGGATTATGGACTGGAAACTTGGAAAAAAAAGGACTATTCGATTATTGGCTTGcaattttaaacaattctATGGGtatattagataaataa
- Protein Sequence
- MKTRKQPQSIKKKVLCSSQNNKTTKKIKHRRLQYDKVNIENALKVVENSGLSLRKAAAAFGVPVATLCRKKNVGCDNIKSKSGPDTVLSSTDEDEIAKWVLDRAAMGAPVTKTELLDCVQKYVQKSAIKTPFTDDRPSRHWYEAFRRRHPELAVRKPQHLSLSRAAVTSEELQEWFRNSANYLESKKLCDISPTRIFNCDESSLLLCPDAESVLAEKGSRAVYKIVDGGKEALTVLFMYRADGVRAPPMLMFSFKKSVPKKIVDNTPRGWGIGVSDNGWMTTETFYEYITNVFYPWLIDQKTEFPVILYMDNHSSHLNLPLVTFCREKQIELIMLPPNSTHIMQPLDILFFRPFKDLWKKCVPKWKNQEDVAQIKKENFPLVLKFTLDNMKNEKNVVVSGFKGSGLYPFDSNAVDYDILQKGKKLKQTLDKKESDNSNLDEEFLIKFEKNLPAETLSEFKNAAISGLWTGNLEKKGLFDYWLAILNNSMGILDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00629028;
- 90% Identity
- -
- 80% Identity
- -