Dlut007749.1
Basic Information
- Insect
- Dyspetes luteomarginatus
- Gene Symbol
- -
- Assembly
- GCA_963669185.1
- Location
- OY769906.1:14580484-14581854[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-07 0.00048 19.9 0.0 14 41 4 30 2 32 0.89 2 2 1.6 1.4e+03 -0.8 0.0 12 23 109 121 108 123 0.77
Sequence Information
- Coding Sequence
- ATGGAAAACTCGGGTTTATCTTTACGAAAAGCAGCCGCTGCTTTTGGAGTACCGGTAGCTACTctaagcagaaaaaaaaatgttgggcctgatatgataaaaaaaaaatcaggaccGGAAACAGTTTTATCATCTATAGAAGAAGATGAAATTGCCAAGTGGGTCTTAGATAGGGCTGCTATTGGAGCACCTGTGACAAAAACAGAGTTATTAGACTGTGTACAGCAATTTGTGCAAAAGTCTGCATTAAAAACTCCGTTCACAGATGACCGTCCAAGTCGCCACTGGTACGAAGGATTTAAGAAACGTCATCCAAAATTATCAGTCAGGAAACCCCAGCATTTGAGTCTCAGTAGAGCAGCTGTCACTTCTGAAGAATTACAAGAGTGGTTCAAAAATTCTGGAAAATACttagaaagtaaaaaattatctaatatTTCTCCtacaagaatttttaactgCGACGAGAGTCGTTTACTTCTGTGTCCTGATGCAGAGAGTGGGTTGGCGGAAAAAGGATCACGTGCAGTTTACAAAATTGTTGACGGTGGCAAGGAAGCTGTGACGGTTCTATTTATGTATAGCGCTGATGGAGTCCGTGGTCCTCCAATGTTAATGTTTTCCTTCAAAAAAGCTGTACCCAAGAAAATAGCTGATAGTACTCCGAAAGGATGGGGTATTGGAGTTTCAGACAACGGTTGGATGACCACGGAAACTTTCTACGAATAcatcacaaatatattttatccctGGCTTGTTGATCAAAAGACTGAGTTCCCGGTTATCTTATACATGGATAATCATTCTTCTCATCTTAATTTACCATTGGTATCTTTCTGTAGAGAAAAGCAGATAGAGTTAGTTATGTTACCTCCAAATTCTACGCACATAATGCAACCCTtggatatttcttttttccgaCCCTTTAAAGATTTATGGAAAAAGTGTGTGCCAAAATGGAAAAACCAAGAAAATGTCACGCAAATTAAGAAAGAGAATTTTCCTCTTGTTTTGAAGTTCACGTTAGAAAATatgaagaacgaaaaaaatgtcgtagTTAGTGGCTTTAAAGGATCAGGACTTTATCCGTTTGACTCGAAGGCAGTAGATTATGACATTTTACAGAAAGGTAAAAAACCAAAACAAACTGTCCATCAGGAAGAAGTCAATAACTCTAATTCAGATAACAACGGAGATAAACAGTTCTTGCTACAATTTGAAAAGAATTTACCAGTAGATACGCTTTGTGAATTCAAAAATGCAGCAATCAGTGGATTATGGACTggagatttagaaaaaaaaggattatttGATTACTGgcttacaatttttaaaaattctacggGTATACCTAATGACCAATTTACATAA
- Protein Sequence
- MENSGLSLRKAAAAFGVPVATLSRKKNVGPDMIKKKSGPETVLSSIEEDEIAKWVLDRAAIGAPVTKTELLDCVQQFVQKSALKTPFTDDRPSRHWYEGFKKRHPKLSVRKPQHLSLSRAAVTSEELQEWFKNSGKYLESKKLSNISPTRIFNCDESRLLLCPDAESGLAEKGSRAVYKIVDGGKEAVTVLFMYSADGVRGPPMLMFSFKKAVPKKIADSTPKGWGIGVSDNGWMTTETFYEYITNIFYPWLVDQKTEFPVILYMDNHSSHLNLPLVSFCREKQIELVMLPPNSTHIMQPLDISFFRPFKDLWKKCVPKWKNQENVTQIKKENFPLVLKFTLENMKNEKNVVVSGFKGSGLYPFDSKAVDYDILQKGKKPKQTVHQEEVNNSNSDNNGDKQFLLQFEKNLPVDTLCEFKNAAISGLWTGDLEKKGLFDYWLTIFKNSTGIPNDQFT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01000475;
- 90% Identity
- -
- 80% Identity
- -